Tan0022022 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTTAGACAAATGTTTTTCTATATATAATGTAGGTGTAAGATACCAAGGTTTGATGAAGCTTGAAAGAGATCTTAAAATCCATCTTCCTAGAATTGGAGAGAAAGAATGAGAATGGGGTCTCACAAATCCCTTTTTGTATTCTTCCTCCTCATGGCATTGGTCTTTTCAAACTTGCCCTCAAAATTTGCTGCACATTATATTCCCCCGGCACCACCACCTCCGGCTACCAGACCTATAGTTCCTTATTATCCTTTTATATTCCCATCTAAGAAGCCTTATAATAAACACACGTCTCCACTGTCGCCGCCGCAGTCAAGGCCAATAGTTCCTTATTATCCATTTAAATTTCCACCACCTCCATCTTCAAAACGCCCCAATCCTCCTCCGAGCAACCATGCCTTTCACCCACAGGGCTCAGCACTGCCGGCCAAGAAGCGTTACATGTCTAAGTCACGGTGGGCAGCCTCACCACCACCACCGCCTAAGAAGCCATATCAGTGGCCGAAGGTGATCAGCCGTAAATCGCCCCCACCTCCTTTCTAATACCTACTACTATATATTTGCATCATATATATGGTGAAGAAGCTTTAGTTTTTTGTATTATATATTTTGGGATTTATTCGTGGTTGTTTTTTCATTCTCTGCATCAAGGAACAAAGAGTGGATTGGAAGATTTCCTTGTTTATCTATGCATCTAGTTTTCATTCACCAAATCAAAACTAGATATGTATTTTTATCCTTTTTGGTCCATGGAGGGATGTGACTTATCGGGTGAAATCTCCCACTTCATAGCTCGATTGACATGAAGTAAGACTTATGATCTAGTGGTCATTAGTTCAAATCCCCCACCCCCAAATGTTGATGTATTCAAAAAAATAAAAATAAAGAGAGGAATATTTTAAATTTATATCTATTAGTTATAAGGGACA ATTGTTAGACAAATGTTTTTCTATATATAATGTAGGTGTAAGATACCAAGGTTTGATGAAGCTTGAAAGAGATCTTAAAATCCATCTTCCTAGAATTGGAGAGAAAGAATGAGAATGGGGTCTCACAAATCCCTTTTTGTATTCTTCCTCCTCATGGCATTGGTCTTTTCAAACTTGCCCTCAAAATTTGCTGCACATTATATTCCCCCGGCACCACCACCTCCGGCTACCAGACCTATAGTTCCTTATTATCCTTTTATATTCCCATCTAAGAAGCCTTATAATAAACACACGTCTCCACTGTCGCCGCCGCAGTCAAGGCCAATAGTTCCTTATTATCCATTTAAATTTCCACCACCTCCATCTTCAAAACGCCCCAATCCTCCTCCGAGCAACCATGCCTTTCACCCACAGGGCTCAGCACTGCCGGCCAAGAAGCGTTACATGTCTAAGTCACGGTGGGCAGCCTCACCACCACCACCGCCTAAGAAGCCATATCAGTGGCCGAAGGTGATCAGCCGTAAATCGCCCCCACCTCCTTTCTAATACCTACTACTATATATTTGCATCATATATATGGTGAAGAAGCTTTAGTTTTTTGTATTATATATTTTGGGATTTATTCGTGGTTGTTTTTTCATTCTCTGCATCAAGGAACAAAGAGTGGATTGGAAGATTTCCTTGTTTATCTATGCATCTAGTTTTCATTCACCAAATCAAAACTAGATATGTATTTTTATCCTTTTTGGTCCATGGAGGGATGTGACTTATCGGGTGAAATCTCCCACTTCATAGCTCGATTGACATGAAGTAAGACTTATGATCTAGTGGTCATTAGTTCAAATCCCCCACCCCCAAATGTTGATGTATTCAAAAAAATAAAAATAAAGAGAGGAATATTTTAAATTTATATCTATTAGTTATAAGGGACA ATGAGAATGGGGTCTCACAAATCCCTTTTTGTATTCTTCCTCCTCATGGCATTGGTCTTTTCAAACTTGCCCTCAAAATTTGCTGCACATTATATTCCCCCGGCACCACCACCTCCGGCTACCAGACCTATAGTTCCTTATTATCCTTTTATATTCCCATCTAAGAAGCCTTATAATAAACACACGTCTCCACTGTCGCCGCCGCAGTCAAGGCCAATAGTTCCTTATTATCCATTTAAATTTCCACCACCTCCATCTTCAAAACGCCCCAATCCTCCTCCGAGCAACCATGCCTTTCACCCACAGGGCTCAGCACTGCCGGCCAAGAAGCGTTACATGTCTAAGTCACGGTGGGCAGCCTCACCACCACCACCGCCTAAGAAGCCATATCAGTGGCCGAAGGTGATCAGCCGTAAATCGCCCCCACCTCCTTTCTAA MRMGSHKSLFVFFLLMALVFSNLPSKFAAHYIPPAPPPPATRPIVPYYPFIFPSKKPYNKHTSPLSPPQSRPIVPYYPFKFPPPPSSKRPNPPPSNHAFHPQGSALPAKKRYMSKSRWAASPPPPPKKPYQWPKVISRKSPPPPF Homology
BLAST of Tan0022022 vs. NCBI nr
Match: XP_008466986.1 (PREDICTED: extensin-3-like, partial [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 9.8e-23 Identity = 75/127 (59.06%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Tan0022022 vs. NCBI nr
Match: KAA0058948.1 (extensin-3-like [Cucumis melo var. makuwa] >TYK15370.1 extensin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-21 Identity = 69/104 (66.35%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Tan0022022 vs. NCBI nr
Match: KAE8647164.1 (hypothetical protein Csa_018816, partial [Cucumis sativus] >KGN47688.2 hypothetical protein Csa_018930, partial [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-21 Identity = 77/133 (57.89%), Postives = 89/133 (66.92%), Query Frame = 0
BLAST of Tan0022022 vs. NCBI nr
Match: XP_022141653.1 (extensin-3-like [Momordica charantia]) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-19 Identity = 78/136 (57.35%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of Tan0022022 vs. NCBI nr
Match: KAA0058946.1 (extensin-3-like [Cucumis melo var. makuwa]) HSP 1 Score: 101.7 bits (252), Expect = 5.6e-18 Identity = 68/120 (56.67%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Tan0022022 vs. ExPASy TrEMBL
Match: A0A0A0KD80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G337020 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.9e-27 Identity = 92/159 (57.86%), Postives = 106/159 (66.67%), Query Frame = 0
BLAST of Tan0022022 vs. ExPASy TrEMBL
Match: A0A1S3CSG8 (extensin-3-like OS=Cucumis melo OX=3656 GN=LOC103504386 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 4.7e-23 Identity = 75/127 (59.06%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Tan0022022 vs. ExPASy TrEMBL
Match: A0A5D3CVI1 (Extensin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20002G00010 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 8.9e-22 Identity = 69/104 (66.35%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Tan0022022 vs. ExPASy TrEMBL
Match: A0A6J1CL44 (extensin-3-like OS=Momordica charantia OX=3673 GN=LOC111011956 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 8.4e-20 Identity = 78/136 (57.35%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of Tan0022022 vs. ExPASy TrEMBL
Match: A0A5A7UXN4 (Extensin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001280 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18 Identity = 68/120 (56.67%), Postives = 78/120 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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