Tan0022020 (gene) Snake gourd v1

Overview


Name	Tan0022020
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	39S ribosomal protein L46, mitochondrial-like isoform X2
Location	LG06: 7787497 .. 7792369 (-)
RNA-Seq Expression	Tan0022020
Synteny	Tan0022020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATCCACTATACCCATTAAATCAGCCCAAACCCATTGTTTATGCAACCTCCGGCGGCCCAGTTAAGATCACAGAACAACTGGAGGAGATTTACCAAAGGGCAACCCTCGCCGTCGACGGTCACCCTCTCGTTCTCAGGTGAATACTTTGTGCTTTTTTCCTTTTCTCTGTGAAAAGCCTTTCGATGGTAGCTTATGAATGGTTGTACAAGATCGTTTTGTCATGTTCTTAGAGCTTCAATGCAAGTTCTATTATCATCTCTCTCAAAACTTCTTGTGTGGTTTCTGAATGGTTGTTTTTTTTTCTTTCTCTTATCGGTTTTTGGATTCTCTCAAGTTTAGAATGCAGAAATCGTTCAGTTTAGTCGGTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTATGCATTTCAGGAGTTCAAGTAAGTCTGTTTTCTTGTATTTCTCTGTTTAATTTCTGAAACTGAGAAACGTTGAAAATGAGAAAATAAAATGAAGGAAACTAGGAGTATGTCATGACTTGATATTCATCAGGACGGGGATTAATCAGGAACTGGAATTCTAACGACGTGATTAGTGTGATAGAGCTATGAACTCGAACTGAAATCAAGTAACATTGGTATGGCATACTCTCAGCAGAAACAGTTTTCTGATGCTTCTCCTCGATTGTGCTCAGGTTTAGGTGGCAGCAGCAATATCGACGCAGATATCCTGATGAATTCTTAGATAAAGCTAATGCCAGGTATATGATCTATCATTTTTTGAGGCTGTCTCCAATATATGATTTTGGATTATGAATTCTTCTGATTTATCTTTTTCAAACTTTTCTAATTCTTGTGCTATTTTAAAGCACCAAGTTCTGCAAAGTGCTCTTTTAATCTATTTTTTTTCATTTTATCAAACATAATTATCCACAAAAATTAAGTCATTAGCAATTTTATATTAGTTATCATATTTTTGCATATTTTATTCTTAAAGATGCAAGACAATTGTTTTTGTTGGCTACTAGGGTACCAGCTGAGTCCAAACTTTGAGCAAGAATATTTTGTGAATGTAAAGAACAATTGTGTTAGACAACTTAACTACCAATGTAATCTAAATATCAAAAGGATGACATTTCCATTCTGATTGAGAAAGATTGGTTTCAGTTTCTAATTACAACGAATTGCAGATTTCTAAGGTTCCCTTCCCATTATAGTGGGTTTTAACTGATTCAAATGCTGTGTGTCTCTGAATAGTATTCCCATGTAAATGCCGCAAAAAAGTTGGGTATGGTTATTATTTCAATGTGATTTGCAAAACTGAAGAAATAACTCTAGTTCTTTTTAAACTAACAACGATTGGTAGTCAAAAGTAATTAATGAAACTTGCCAGTTATGGATAGGGTTAAAGTTTATGACTTCGTTGGAGCCCGCTAAGTTGAAGCTTTTTGGTGATGAATCTTAGTGTTTCCTCTAGTAGTGAGCCTAATACGTTGTAGATTTTAGGTGGCCAATTTATTATTTCTTTGGATCATTTGCATGGATTATCTAGGTGGAGAATGACTAACTTTTTTTTCCCCTGAATAGATTGTGTTAGTGCATGTTTGGTGTAAAAGAGGTGGCGTTGTTTACTTAAATTACTGATATATTACTATCACTCTAAGAAGCACAGACACAACAGGACACGCCGATACGTCAATTTTTAAAAAATTAGGGCACGAACACATGGGAGATATGTTCGTTTTTTGTTATTATTATTTTAACATATATGTAATTTTTTTTTATAAGACATATATGTAAATTTAACATAAAATGTTAAACAGTGTATTAAAAAGCCCATTCGGGCGCGCGCCTAAGCGCAAAGCCCACCTTAAGCACCTCGCCTTGAAGAGGCGAGGCGCATGTAGGAAGGCGCGCGCGAGGCGTGCGCCTTCCATGAAGCCCAAGAGGCGCACCAGGCGCACGCCTCTAGGGCTTCTTCAATTTATTTACTTTTTTTTTTAGTTTTAAAAGTTAAACTTACCGTTTTACTTATTTTCAATATATTTAGTGAAGAATAGATTGATATTTAAGGCTTTTGATCTTGTATTGTTTATTAGTGTTGTATTGTTTCATGTTTTTTAATGGAGTATTGACTCTATGTTCAAAGACTAATACTTGAACCTTATTTCTTTTACCTATTTTTCTTGGTTAAAACTTAATTTCTTTCCATGAAGGATTTTTTCTTATTGTGTATGTATACATATATATTTTATATTTTTTATATATATAGTGCGCTTTAGAAAAAAAAGCCGCGCCTTTTGGTGTGCCTTGCCCCTAGGCTCCAGAGGGCTATTGCGCCTTGAGCCTTTAAAAACGTTGATGCTAAATAGACTCCATTAAAACGCATACAATGTCTAGTTAATTAAGTTTAACTTACTCTAATTTAACTTAACTTGTAGAAAGTTAAGAAAAAAATACTTCCAAATGGTGAACCGTCAGTGGTGAAGAAGACTAACGATGGAGAAGAGAACTGACAACTAGTGATGAGTGGTTAGCAGTGTTACTTGTTAGGGGTTTAGATTTCATGATTTAATGTCCTTCTTTATTTTTTTTTATTTTTTTAAATTTAAATGATTTGAGCCCTTTTTTTTCCAAAATTTTTCCAAGCCGTGTCTAGCCGTGTCCAAAATTAAAAAATAAAAAAATAAAAAAGGACACGCATCCGGAGTGTGTCCGGACGCATACTTGTCCGACACAGACACTTGCCCTAAAATGAGGTATTTTTGCTTCCTAGGGTATCACTAATACAATTTCATATGCCCATAGCACAATTTTACATTTTGCTACAAGGCAATCTCCACTCTTAGCCTCATCAATATTCAGCTAGATAAATTGTTTTTATTGGCACAAACACTAGATAAATTCAAATAAATGTTTTTATTTTCTTTTGGCTAGTGTATGACTCGAGCTGCTGATAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTATGCAGTCTTATTTATTTAGAATTAATAGATTGAACGTCTCCTTCTTGATGCTGCCATCACTATTGAGGGAAAATAAAAATGAAATCTACGAGCTCTTGTTCTTGTTCATGCTTTTGTTACGAGGATATCCTTGTGTTAATTACTCGACTCTTCTCGATGATCAGTTTCCTCTTGCTTCTGTTATTTTATTTGACTACCATAAGTTTTGAGGATATTCTTTTATTGTTGTGACTATATAATGTTTTTTGTGAGAATATTTTTCAATTGTCAGACTATATAATTTTCTTTCTTTTGGTTACCCACAATTTTTCTTTTCTTGAAATTCTTTGTTACATCTGTGTCTAGATTAATGTGCAACACTTTTTAATCCCAATAGCGCACAGTGCGACTCTAGTGCTTTGTACTCATTTACCTTAGTTTTCATACATCTTTAAAACCACTCTTCGACTTGATTCATCGTGACCAATGAAACCTATTTTTTCCTTGCAGAAATCCCATGAATAAGAGAATTGCTAGATATCATTGTATGTCTAATAAATGTTGAAATTATATTCCTTGGTCACTATATCAGCATCTTTCTTACTCTACAACTAGAGTTTTTAGATGGCGTCTCTAAAATACAAGGTTTCCTTTTTTTTCTCACGGTTGATTTTAGAGTTCAGGCTATCTGATCCAAGCCATTAGTTTGCCAGATTCTTAGCTCAAAAGTGAAATTTACATTCTGTCTACTTGAATTGTCTTCTTTCCTTTTAGGTCACTGCAGAGGGCACTTGATAGAAGACTCTACCTTCTTCTCTATGGTACCTCTATTGGGGCACCTGATAAGAAACCTGTCTGGCATTTTCCAGAAAAAGTTTACGAGACCGAGGAGACACTACGTAAAGTGAGAATCAGCTATCGATACTCTTCATTTATCTTTCTCATCATTTTTTACCCTTCTAACTTCCAAGTTTTGCAGTGTGCAGAGTCTGCCTTAAAGTCCATCCTTGGAGATCTTTCTCATACATATTTTGTCGGAAATGCTCCAATGGCGCATATGGTTGTACCGCCTACAGAAACTGCACAAGTGCCACCTTTAAAGGTATGTCTTCTACTAAAAAATTATATCATATAATAGCTTCAAGCACTGACAGTTAACTAGTTTCGGAATTTCTGCTCGAACTTAGAGTATTAAGTTTAGTAAAATGTGGTCGTCTACTTGTATGCTTAAACATCTCTCCCCTTTGCCAGCGATTCTTTTTTAAGTCTCAAGTGATTGCAACCAATAAATTCGATATTGAGAAATGTGAAGATTTTTTGTGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCAGCAAGTAGATTGACCATATAATAAGCCCCATAGATTGTTTCAATCAACAAATTCATGGTGAGTTTGTAAGTGAAGTAGGATGATTGAGTTAGGAAATTCTAAACTAAAGGTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGATGTAGAATGGATAAATGAGGATATCAATTGGGAAATTCTCTCTTCTTAGCTGTTCTTTGATGATTGGATAGTCTGAATAAATGGTTCGATACTCTTATTTTGATTTCTCGAACCAACGAGAGTAATCATTAGTATGTTCTCAAAATTTAAATATATTAGACTTCTATTTACAATATTGTTTCCTAATCATGTTTAAACTAGAAACCCTAATTTAGACCTCAAACTTTGTAAGTTGTATTATGTCATTTGCACCTGAC

mRNA sequence

AATTAATCCACTATACCCATTAAATCAGCCCAAACCCATTGTTTATGCAACCTCCGGCGGCCCAGTTAAGATCACAGAACAACTGGAGGAGATTTACCAAAGGGCAACCCTCGCCGTCGACGGTCACCCTCTCGTTCTCAGAATGCAGAAATCGTTCAGTTTAGTCGGTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTATGCATTTCAGGAGTTCAAGTTTAGGTGGCAGCAGCAATATCGACGCAGATATCCTGATGAATTCTTAGATAAAGCTAATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTCACTGCAGAGGGCACTTGATAGAAGACTCTACCTTCTTCTCTATGGTACCTCTATTGGGGCACCTGATAAGAAACCTGTCTGGCATTTTCCAGAAAAAGTTTACGAGACCGAGGAGACACTACGTAAATGTGCAGAGTCTGCCTTAAAGTCCATCCTTGGAGATCTTTCTCATACATATTTTGTCGGAAATGCTCCAATGGCGCATATGGTTGTACCGCCTACAGAAACTGCACAAGTGCCACCTTTAAAGCGATTCTTTTTTAAGTCTCAAGTGATTGCAACCAATAAATTCGATATTGAGAAATGTGAAGATTTTTTGTGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCAGCAAGTAGATTGACCATATAATAAGCCCCATAGATTGTTTCAATCAACAAATTCATGGTGAGTTTGTAAGTGAAGTAGGATGATTGAGTTAGGAAATTCTAAACTAAAGGTTGAGGCTGGAGGTTTTGTTTGTTGTTCTGATGTAGAATGGATAAATGAGGATATCAATTGGGAAATTCTCTCTTCTTAGCTGTTCTTTGATGATTGGATAGTCTGAATAAATGGTTCGATACTCTTATTTTGATTTCTCGAACCAACGAGAGTAATCATTAGTATGTTCTCAAAATTTAAATATATTAGACTTCTATTTACAATATTGTTTCCTAATCATGTTTAAACTAGAAACCCTAATTTAGACCTCAAACTTTGTAAGTTGTATTATGTCATTTGCACCTGAC

Coding sequence (CDS)

ATGCAGAAATCGTTCAGTTTAGTCGGTCAGCTGGTGAAGAGGCGAGGATTTTCGACGAATTCTGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCAGTCGTGATTCCGAAGATTGATCCTGTTGTCTATGCATTTCAGGAGTTCAAGTTTAGGTGGCAGCAGCAATATCGACGCAGATATCCTGATGAATTCTTAGATAAAGCTAATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTCACTGCAGAGGGCACTTGATAGAAGACTCTACCTTCTTCTCTATGGTACCTCTATTGGGGCACCTGATAAGAAACCTGTCTGGCATTTTCCAGAAAAAGTTTACGAGACCGAGGAGACACTACGTAAATGTGCAGAGTCTGCCTTAAAGTCCATCCTTGGAGATCTTTCTCATACATATTTTGTCGGAAATGCTCCAATGGCGCATATGGTTGTACCGCCTACAGAAACTGCACAAGTGCCACCTTTAAAGCGATTCTTTTTTAAGTCTCAAGTGATTGCAACCAATAAATTCGATATTGAGAAATGTGAAGATTTTTTGTGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGA

Protein sequence

MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPPLKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS

Homology

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BLAST of Tan0022020 vs. ExPASy Swiss-Prot
Match: P36528 (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL17 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 8.5e-16
Identity = 58/166 (34.94%), Postives = 83/166 (50.00%), Query Frame = 0


Query: 66  FLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPV 125
           F +    + K D     +P  RITEAD++ND KSL+R L R LYLL+        DK   
Sbjct: 124 FSNNQKEQSKDDVNRPVIPNDRITEADRSNDMKSLERQLSRTLYLLV-------KDKSGT 183

Query: 126 WHFPE-KVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPPLKRF 185
           W FP   + +  + L   AE+ LK + GD  +T+ V   P+  +      TA+      F
Sbjct: 184 WKFPNFDLSDESKPLHVHAENELKLLSGDQIYTWSVSATPIGVLQDERNRTAE------F 243

Query: 186 FFKSQVIATNKFDI-----EKCEDFLWVTKDELMEYFPDQAEFFKK 226
             KS ++A  KFD+     +  EDF W+TK E+ EY P   ++F K
Sbjct: 244 IVKSHILA-GKFDLVASKNDAFEDFAWLTKGEISEYVP--KDYFNK 273

[Close]

BLAST of Tan0022020 vs. ExPASy Swiss-Prot
Match: Q9EQI8 (39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.2e-13
Identity = 49/139 (35.25%), Postives = 70/139 (50.36%), Query Frame = 0


Query: 80  IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETL 139
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   VW  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-VLLVREKLGDQD---VWMLPQVEWQPGETL 186

Query: 140 RKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP---LKRFFFKSQVIATNKF 199
           R  AE  L ++  +     F+GNAP  H      +  Q      +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFV 246

Query: 200 DIEKCEDFLWVTKDELMEY 216
              K    +W +K+EL +Y
Sbjct: 247 QAGKKSRHVWASKEELGDY 261

[Close]

BLAST of Tan0022020 vs. ExPASy Swiss-Prot
Match: Q9H2W6 (39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 49/132 (37.12%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 87  RITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESA 146
           RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQAEWQPGETLRGTAERT 195

Query: 147 LKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP---LKRFFFKSQVIATNKFDIEKCED 206
           L ++  +     F+GNAP  H      +  +       K FFFK+ ++  +         
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 207 FLWVTKDELMEY 216
            +WVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]

BLAST of Tan0022020 vs. ExPASy Swiss-Prot
Match: Q5RBU2 (39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 49/132 (37.12%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 87  RITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETLRKCAESA 146
           RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQTEWQPGETLRGTAERT 195

Query: 147 LKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP---LKRFFFKSQVIATNKFDIEKCED 206
           L ++  +     F+GNAP  H      +  +       K FFFK+ ++  +         
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 207 FLWVTKDELMEY 216
            +WVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]

BLAST of Tan0022020 vs. ExPASy Swiss-Prot
Match: Q3SZ22 (39S ribosomal protein L46, mitochondrial OS=Bos taurus OX=9913 GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-12
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 0


Query: 80  IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPEKVYETEETL 139
           + + P  RIT+AD  NDR SL R LDR L +LL    +G  D   VW  P+  ++  ETL
Sbjct: 127 LQFKPGARITDADVKNDRSSLHRKLDRNL-ILLVKDKLGDQD---VWMLPQAEWQPGETL 186

Query: 140 RKCAESALKSILGDLSHTYFVGNAPMAH--MVVPPTETAQVPPLKRFFFKSQVIATNKFD 199
           R+ AE  L ++  +     F+GNAP  H     P    A+     + FF   ++ T  F 
Sbjct: 187 RQTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQAVRAEGSLGAKIFFFKALLLTGDFS 246

Query: 200 --IEKCEDFLWVTKDELMEY 216
             +EK    +W +K+EL +Y
Sbjct: 247 PAVEKGR-HVWASKEELGDY 261

[Close]

BLAST of Tan0022020 vs. NCBI nr
Match: KAG6595682.1 (39S ribosomal protein L46, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.9 bits (1143), Expect = 4.2e-121
Identity = 217/229 (94.76%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ SFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 5   MQSSFSLTGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 64

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTND+KSLQRALDRRLYLLLYGT+IGAP
Sbjct: 65  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDKKSLQRALDRRLYLLLYGTTIGAP 124

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKPVWHFPEKVYETEETLRKCAESAL SILG LSHTYFVGNAPMAHMVVPPT+TAQV  
Sbjct: 125 DKKPVWHFPEKVYETEETLRKCAESALASILGGLSHTYFVGNAPMAHMVVPPTQTAQVSS 184

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           L+RFFFKSQVIATNKF+IEKCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 185 LRRFFFKSQVIATNKFNIEKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 233

[Close]

BLAST of Tan0022020 vs. NCBI nr
Match: XP_038897002.1 (54S ribosomal protein L17, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 443.7 bits (1140), Expect = 9.4e-121
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ+SF   GQLVKRR FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 17  MQRSFGFAGQLVKRRRFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYP+EFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP
Sbjct: 77  RYPEEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           D+KPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPM HMVVP TETAQVPP
Sbjct: 137 DEKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMGHMVVPSTETAQVPP 196

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           LKRFFFKSQVIATNKF+I KCEDF+WVTKDEL+EYFPDQAEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELLEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Tan0022020 vs. NCBI nr
Match: XP_038897003.1 (54S ribosomal protein L17, mitochondrial isoform X2 [Benincasa hispida] >XP_038897004.1 54S ribosomal protein L17, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 443.7 bits (1140), Expect = 9.4e-121
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ+SF   GQLVKRR FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFGFAGQLVKRRRFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYP+EFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP
Sbjct: 61  RYPEEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           D+KPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPM HMVVP TETAQVPP
Sbjct: 121 DEKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMGHMVVPSTETAQVPP 180

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           LKRFFFKSQVIATNKF+I KCEDF+WVTKDEL+EYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELLEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Tan0022020 vs. NCBI nr
Match: XP_022992543.1 (39S ribosomal protein L46, mitochondrial-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120
Identity = 215/229 (93.89%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ+SFSL  QL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYG SIGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKP+WHFPEK YETEETLRKCAESAL+S+LG LSHTYFVGNAPMAHMVVPPTETAQVP 
Sbjct: 121 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           LKRFFFKSQVIATNKF+I KCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Tan0022020 vs. NCBI nr
Match: XP_022925096.1 (39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120
Identity = 217/229 (94.76%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ SFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 17  MQSSFSLAGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGT+IGAP
Sbjct: 77  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTTIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKPVWHFPEKVYETEETLRKCAE AL SILG LSHTYFVGNAPMAHMVVPPTETAQV  
Sbjct: 137 DKKPVWHFPEKVYETEETLRKCAECALASILGGLSHTYFVGNAPMAHMVVPPTETAQVSS 196

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           L+RFFFK QVIATNKF+IEKCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 197 LRRFFFKCQVIATNKFNIEKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Tan0022020 vs. ExPASy TrEMBL
Match: A0A6J1EB49 (39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432442 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 217/229 (94.76%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ SFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQSSFSLAGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGT+IGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTTIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKPVWHFPEKVYETEETLRKCAE AL SILG LSHTYFVGNAPMAHMVVPPTETAQV  
Sbjct: 121 DKKPVWHFPEKVYETEETLRKCAECALASILGGLSHTYFVGNAPMAHMVVPPTETAQVSS 180

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           L+RFFFK QVIATNKF+IEKCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LRRFFFKCQVIATNKFNIEKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Tan0022020 vs. ExPASy TrEMBL
Match: A0A6J1JQ58 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 215/229 (93.89%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ+SFSL  QL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 17  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYG SIGAP
Sbjct: 77  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKP+WHFPEK YETEETLRKCAESAL+S+LG LSHTYFVGNAPMAHMVVPPTETAQVP 
Sbjct: 137 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           LKRFFFKSQVIATNKF+I KCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Tan0022020 vs. ExPASy TrEMBL
Match: A0A6J1JZI9 (39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 215/229 (93.89%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ+SFSL  QL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYG SIGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKP+WHFPEK YETEETLRKCAESAL+S+LG LSHTYFVGNAPMAHMVVPPTETAQVP 
Sbjct: 121 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           LKRFFFKSQVIATNKF+I KCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Tan0022020 vs. ExPASy TrEMBL
Match: A0A6J1JTU9 (54S ribosomal protein L17, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 215/229 (93.89%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ+SFSL  QL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 45  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 104

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYG SIGAP
Sbjct: 105 RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 164

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKP+WHFPEK YETEETLRKCAESAL+S+LG LSHTYFVGNAPMAHMVVPPTETAQVP 
Sbjct: 165 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 224

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           LKRFFFKSQVIATNKF+I KCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 225 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 273

[Close]

BLAST of Tan0022020 vs. ExPASy TrEMBL
Match: A0A6J1EEA2 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432442 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 217/229 (94.76%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MQKSFSLVGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60
           MQ SFSL GQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 10  MQSSFSLAGQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 69

Query: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAP 120
           RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGT+IGAP
Sbjct: 70  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTTIGAP 129

Query: 121 DKKPVWHFPEKVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPP 180
           DKKPVWHFPEKVYETEETLRKCAE AL SILG LSHTYFVGNAPMAHMVVPPTETAQV  
Sbjct: 130 DKKPVWHFPEKVYETEETLRKCAECALASILGGLSHTYFVGNAPMAHMVVPPTETAQVSS 189

Query: 181 LKRFFFKSQVIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           L+RFFFK QVIATNKF+IEKCEDF+WVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 190 LRRFFFKCQVIATNKFNIEKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 238

[Close]

BLAST of Tan0022020 vs. TAIR 10
Match: AT1G14620.1 (decoy )

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-94
Identity = 163/220 (74.09%), Postives = 186/220 (84.55%), Query Frame = 0


Query: 11  LVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKA 70
           L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDEFLD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 71  NARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPE 130
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 131 KVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPT-ETAQVPPLKRFFFKSQ 190
           KVY++E TLRKCAESALKS++GDL+HTYFVGNAPMAHM + PT E   +P  KRFFFK  
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCS 193

Query: 191 VIATNKFDIEKCEDFLWVTKDELMEYFPDQAEFFKKMIIS 230
           V+A +K+DI  CEDF+WVTKDEL+E+FP+QAEFF KMIIS
Sbjct: 194 VVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233

[Close]

BLAST of Tan0022020 vs. TAIR 10
Match: AT1G14620.2 (decoy )

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-72
Identity = 131/188 (69.68%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 11  LVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKA 70
           L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDEFLD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 71  NARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGTSIGAPDKKPVWHFPE 130
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 131 KVYETEETLRKCAESALKSILGDLSHTYFVGNAPMAHMVVPPTETAQVPPLKRFFFKSQV 190
           KVY++E TLRKCAESALKS++GDL+HTYFVGNAPMAHM + PTE  ++P L  +    Q+
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTE--EMPDLPSYKVLLQM 193

Query: 191 IATNKFDI 199
             ++  +I
Sbjct: 194 QCSSSIEI 199

The following BLAST results are available for this feature:

BLAST of Tan0022020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36528	8.5e-16	34.94	54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q9EQI8	5.2e-13	35.25	39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1...	[more]
Q9H2W6	2.0e-12	37.12	39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 ...	[more]
Q5RBU2	2.0e-12	37.12	39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 ...	[more]
Q3SZ22	3.4e-12	35.00	39S ribosomal protein L46, mitochondrial OS=Bos taurus OX=9913 GN=MRPL46 PE=2 SV...	[more]

BLAST of Tan0022020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595682.1	4.2e-121	94.76	39S ribosomal protein L46, mitochondrial, partial [Cucurbita argyrosperma subsp....	[more]
XP_038897002.1	9.4e-121	94.32	54S ribosomal protein L17, mitochondrial isoform X1 [Benincasa hispida]	[more]
XP_038897003.1	9.4e-121	94.32	54S ribosomal protein L17, mitochondrial isoform X2 [Benincasa hispida] >XP_0388...	[more]
XP_022992543.1	1.2e-120	93.89	39S ribosomal protein L46, mitochondrial-like isoform X3 [Cucurbita maxima]	[more]
XP_022925096.1	1.2e-120	94.76	39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Tan0022020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EB49	6.0e-121	94.76	39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita moschata O...	[more]
A0A6J1JQ58	6.0e-121	93.89	39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A6J1JZI9	6.0e-121	93.89	39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita maxima OX=...	[more]
A0A6J1JTU9	6.0e-121	93.89	54S ribosomal protein L17, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1EEA2	6.0e-121	94.76	39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita moschata O...	[more]

BLAST of Tan0022020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14620.1	1.6e-94	74.09	decoy	[more]
AT1G14620.2	1.0e-72	69.68	decoy	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 96..188 e-value: 1.1E-20 score: 75.7
None	No IPR available	PANTHER	PTHR13124:SF14	SUBFAMILY NOT NAMED	coord: 11..185
IPR040008	39S ribosomal protein L46, mitochondrial	PANTHER	PTHR13124	39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED	coord: 11..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0022020.1	Tan0022020.1	mRNA
Tan0022020.2	Tan0022020.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome