Tan0021985 (gene) Snake gourd v1

Overview


Name	Tan0021985
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Exonuclease domain-containing protein
Location	LG09: 5227373 .. 5230108 (+)
RNA-Seq Expression	Tan0021985
Synteny	Tan0021985

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATCCAAGAACCAGTTTCTTCGGATTTCCATGTTTCCGAAAAGCACTTCTCCATCTTCTTCGCCACGATTTACACCCTCTCTCTCTCTCATTTAACTTACTTTCTTCTGTCGGGTGTTCAAAAAATGCAGCAAAATCCTCCCTCAGATTTCCTTTCAGGCAAGTTTCTTTCTCTCTCTCTTATTTTTTCTGCTAGTTTCCTGTTTCTGCATTGAAAAAATGGTTCAAAATGTGAAAAAAAGGGGAAGGAATTCTGTTCTTCTGAAATACGAATGTAGATGGTTCGAAGTTGTTCAACAATTTAATGGGTCTATTGCAGCTTGCACTGTATACCCTTTTTTTTCAATCTGAGGCAGCAGGTCTTAATTTGGAAGTTTTGAGTGTGAGCAATCAATTGGTTTGTGTTGCTTGATTTCGTGTTTATTTGATTTTTACTAATGAATGATTGGATTTCTCTTTGTGGGAATTCGGGGAAGTATTGGACATGGCGGGAGTTGGAAATGTTCTTGGCTAAAGGGATTTGATTACAAAGTGTTTGTGAAAATGCCTGAATGAGCTCATGGAAGATTAATTCTATTTTTTTTGCTTTGACATAGTTGTGTTTGGGAAGGAATTCTGTTCTTCTGAAATACGAATGTAGATGGTTCGAAGTTGTTCAACAATTTAATGGGTCTATTGCAGCTTGCACTGTATACCCTTTTTTTTCAATCTGAGGCAGCAGGTCTTAATTTGGAAGTTTTGAGTGTGAGCAATCAATTGGTTTGTGTTGCTTGATTTCGTGTTTATTTGATTTTTACTAATGAATGATTGGATTTCTCTTTGTGGGAATTCAGGGAAGTATTGGACATGGCGGGAGTTGGAAATGTTCTTGGCTAAAGGGATTTGATTACAAAGTGTTTGTGAAAATGCCTGAATGAGCTCATGGAAGACTAATTCTATTTTTTTTGCTTTGACATAGTTGTGTTTGTTCTTTTGAGCATTTGGGCTTTTAACTTTGTTGTTTTGTTGGTTCTCTGGTGATTCTGTTTGATAATTAATGTGAAGAAATTGAAGATGATCTTTTTTTTGTTTCTTGGTCTGATAATGGTCTTTTTTACATTGTTTGTCACCCCCCATTATCTTCAGGTTGAAGAAAATTTCTTCCGATGCTGGATTGTTTTGGGTTTTCTGTCTAGTTTTCCTCTTGTTGTGTTGTGATTTCAAATGATAACAGTTCCGATGTGCTTTTCAATCTTGCGAGTTCCGAAATTTGGAGTCCACACTTTAGCTAATTTATGGAGGGTAAACTTCCATCCCTTGAAGAGGAATTATGGTCATAGTTGTTGGTATGATCAGTTTGGTTCTAGAATCTATAGCCTTGAAGGAGGACCGAATAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCAAAAACCAACCCTAGCAGTAAACCAAGCAATATCAGGAATGAAATCTTAGAGGAACCGATCTCAACAAGCTGTGCAGTTAGCATTAATAAGTCTGAAAAGAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAGCAAACGATTATTAAGAACAAGGAATTGGCTCGACCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAGACCTTGATAGAATAGTGGAAATTGCACTTCAAGATCTTTCAGGCGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCATTACAAGCCGAATGGTCAGTAGACCCGATGTTCCAAGGTATCGAAACGCTTGTTGTAGTCTCATTCCTCTAATATTGGCTCCAATTTGAATCTTGGATTAGGTTTATGCTAGGTTCCCTCATTTCAAATTTTCAAAGTCATTATATTTTATTTACTGTGATATTTCCAGAGTTGATCAATCATATCTAAACGTTTCTTTTCTATGTTCATATAGGATGAAGGAACTCATACCAATTTTATTACAATTTATTAGAAGCCGTCAGAAACCTGATGGTTATGTATTGTTAGTAGCTCATAATGCTCGTACATTCGACGTGCCTTTTTTGCTCAAGGAATTCAAACGTTGCTCGGTTGACATTCCTCCAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAATTAATGAAATCCTCAGGTTAGTTTTCCCTTTGCACATATTATCTTGCTCTGGTTTCTTTGATGATAAAAAGATTGATGTGATGTAATGTAATATCGATGGAAATGTCGTGATCAGATTCGAAGATTACGAAAATATCATTACAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACAGAGCAATGTCCGACGTGTGGTCGTTGTCGATGATTCTTCAGAGGCTTACTTTTGAGCTCAAGCTAGGCATCCCGGATCTCGTTGAAAGATCTTTCACAGCATCAGATCTGATTAATAAGAAGAAGAATTAGTGTGTTAAGTTATATGCACAAATCAATCTTAACTTGGTGATTAAGCTGTGCTTTTGTTGTAATGTTATTTATTAATTGTAACTTCAGTTCATTCTTATCAGCAAAATCCTGGGCCATTTTATTTATGGTCACTATATTTGTCTTGATTTCCATATTCTCCAAAAACTAATGCCTGAATTGGAATATCACGACAGACAAAGTATAGTTTTGTTTTCTTGCTTTGAATGGATACCGAATGAAACAAGAATTGATAGA

mRNA sequence

CTAAAATCCAAGAACCAGTTTCTTCGGATTTCCATGTTTCCGAAAAGCACTTCTCCATCTTCTTCGCCACGATTTACACCCTCTCTCTCTCTCATTTAACTTACTTTCTTCTGTCGGGTGTTCAAAAAATGCAGCAAAATCCTCCCTCAGATTTCCTTTCAGGTTGAAGAAAATTTCTTCCGATGCTGGATTGTTTTGGGTTTTCTGTCTAGTTTTCCTCTTGTTGTGTTGTGATTTCAAATGATAACAGTTCCGATGTGCTTTTCAATCTTGCGAGTTCCGAAATTTGGAGTCCACACTTTAGCTAATTTATGGAGGGTAAACTTCCATCCCTTGAAGAGGAATTATGGTCATAGTTGTTGGTATGATCAGTTTGGTTCTAGAATCTATAGCCTTGAAGGAGGACCGAATAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCAAAAACCAACCCTAGCAGTAAACCAAGCAATATCAGGAATGAAATCTTAGAGGAACCGATCTCAACAAGCTGTGCAGTTAGCATTAATAAGTCTGAAAAGAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAGCAAACGATTATTAAGAACAAGGAATTGGCTCGACCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAGACCTTGATAGAATAGTGGAAATTGCACTTCAAGATCTTTCAGGCGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCATTACAAGCCGAATGGTCAGTAGACCCGATGTTCCAAGGATGAAGGAACTCATACCAATTTTATTACAATTTATTAGAAGCCGTCAGAAACCTGATGGTTATGTATTGTTAGTAGCTCATAATGCTCGTACATTCGACGTGCCTTTTTTGCTCAAGGAATTCAAACGTTGCTCGGTTGACATTCCTCCAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAATTAATGAAATCCTCAGATTCGAAGATTACGAAAATATCATTACAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACAGAGCAATGTCCGACGTGTGGTCGTTGTCGATGATTCTTCAGAGGCTTACTTTTGAGCTCAAGCTAGGCATCCCGGATCTCGTTGAAAGATCTTTCACAGCATCAGATCTGATTAATAAGAAGAAGAATTAGTGTGTTAAGTTATATGCACAAATCAATCTTAACTTGGTGATTAAGCTGTGCTTTTGTTGTAATGTTATTTATTAATTGTAACTTCAGTTCATTCTTATCAGCAAAATCCTGGGCCATTTTATTTATGGTCACTATATTTGTCTTGATTTCCATATTCTCCAAAAACTAATGCCTGAATTGGAATATCACGACAGACAAAGTATAGTTTTGTTTTCTTGCTTTGAATGGATACCGAATGAAACAAGAATTGATAGA

Coding sequence (CDS)

ATGATAACAGTTCCGATGTGCTTTTCAATCTTGCGAGTTCCGAAATTTGGAGTCCACACTTTAGCTAATTTATGGAGGGTAAACTTCCATCCCTTGAAGAGGAATTATGGTCATAGTTGTTGGTATGATCAGTTTGGTTCTAGAATCTATAGCCTTGAAGGAGGACCGAATAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCAAAAACCAACCCTAGCAGTAAACCAAGCAATATCAGGAATGAAATCTTAGAGGAACCGATCTCAACAAGCTGTGCAGTTAGCATTAATAAGTCTGAAAAGAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAGCAAACGATTATTAAGAACAAGGAATTGGCTCGACCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAGACCTTGATAGAATAGTGGAAATTGCACTTCAAGATCTTTCAGGCGGAGAAAATAGCACCTTCCAAACATTAATAAATCCAGAGTGCTATATTCCAAATTCAGTTGTACATGGCATTACAAGCCGAATGGTCAGTAGACCCGATGTTCCAAGGATGAAGGAACTCATACCAATTTTATTACAATTTATTAGAAGCCGTCAGAAACCTGATGGTTATGTATTGTTAGTAGCTCATAATGCTCGTACATTCGACGTGCCTTTTTTGCTCAAGGAATTCAAACGTTGCTCGGTTGACATTCCTCCAAATTGGCTATTTTTCGATAACATTCTTTTAGCCCGTCAATTAATGAAATCCTCAGATTCGAAGATTACGAAAATATCATTACAAGCTCTTCGTGAGTATTACAATATTCCACTGGTGGGTTCAGCTCACAGAGCAATGTCCGACGTGTGGTCGTTGTCGATGATTCTTCAGAGGCTTACTTTTGAGCTCAAGCTAGGCATCCCGGATCTCGTTGAAAGATCTTTCACAGCATCAGATCTGATTAATAAGAAGAAGAATTAG

Protein sequence

MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELKLGIPDLVERSFTASDLINKKKN

Homology

[Close]

BLAST of Tan0021985 vs. ExPASy Swiss-Prot
Match: Q682U6 (Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DPD1 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.7e-62
Identity = 138/323 (42.72%), Postives = 202/323 (62.54%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           +T       T   S+ SN ++ +L   +  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDI 245
            + MV RP+VPRM+ELIPI L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFELKLGIPDLVERSFTASDL 327
           +LT +LKL + DLV R  TASD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Tan0021985 vs. ExPASy Swiss-Prot
Match: Q895K2 (DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=polC PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-13
Identity = 60/180 (33.33%), Postives = 91/180 (50.56%), Query Frame = 0


Query: 134 ITFDIETTGFSRDLDRIVEI-ALQDLSGGENSTFQTLINPECYIPNSVVH--GITSRMVS 193
           + FDIETTGFS   D+I+EI A++   G     + T +NPE  IP  ++   GI   MV 
Sbjct: 414 VVFDIETTGFSNKNDKIIEIGAVKIKEGKVVDKYSTFVNPERIIPEKIIELTGIHDYMVK 473

Query: 194 RPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLF 253
             D P+++E++P  + FI          +LVAHNA  FDV F+ K  K   +       F
Sbjct: 474 --DAPKIEEVLPKFIDFIEDS-------ILVAHNA-NFDVSFIKKNCKDFGIH------F 533

Query: 254 FDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFELK 311
            + IL    L K    ++ +  L  + ++  IPL+ + HRA+ D  +   IL +   +LK
Sbjct: 534 NNPILDTIPLCKFLYPELKRYKLNVVAKHLGIPLL-NHHRAVEDAKTTGDILLKAFEDLK 576

[Close]

BLAST of Tan0021985 vs. ExPASy Swiss-Prot
Match: Q8RA32 (DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=polC PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.4e-11
Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 0


Query: 134 ITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSV--VHGITSRMVS 193
           + FDIETTG S   D I+EI    +   +   TF+T +NP+  I + +  + GI   MV 
Sbjct: 389 VVFDIETTGLSNINDEIIEIGAVKIKNKKIVDTFETFVNPQIPISSFITKLTGIDESMVK 448

Query: 194 RPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLF 253
             D P ++E++P  L+F +         +LVAHNA  FDV F+  + K+  + +    L 
Sbjct: 449 --DAPLIEEVLPKFLEFAKG-------AVLVAHNA-NFDVSFIKSKAKKLGLTVENTVL- 508

Query: 254 FDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRLTFEL- 313
            D + L+R L +     +    L  L E++ + L+   HRA+ D  + + I  ++  +L 
Sbjct: 509 -DTLELSRHLYQD----LKNYKLDTLAEFFEVKLL-HHHRAVEDAKATAEIFIKMLEKLQ 560

Query: 314 KLGIPDLVE 319
           ++GI  + E
Sbjct: 569 EIGIKSVSE 560

[Close]

BLAST of Tan0021985 vs. ExPASy Swiss-Prot
Match: Q8XJR3 (DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=polC PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10
Identity = 56/173 (32.37%), Postives = 85/173 (49.13%), Query Frame = 0


Query: 134 ITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GITSRMVS 193
           + FDIETTGFS   D+I+EI    L  GE   +F T ++P+  IP  +     IT  MV+
Sbjct: 436 VVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIPYKITELTSITQNMVN 495

Query: 194 RPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIPPNWLF 253
               P + E++P  ++F+       G  +LVAHNA  FDV F+ K        +      
Sbjct: 496 --GQPTIDEVLPKFMEFV-------GNSVLVAHNA-AFDVGFIKKNLMDMGKTLKNP--V 555

Query: 254 FDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ 304
            D + LAR L       + K+ L  + ++  I L  + HRA+ D  + + IL+
Sbjct: 556 MDTVPLARYLYPD----LKKVKLNLVAKHLGISL-ENHHRAVDDAKATAEILK 591

[Close]

BLAST of Tan0021985 vs. ExPASy Swiss-Prot
Match: A7X1P4 (DNA polymerase III PolC-type OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=polC PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07
Identity = 48/189 (25.40%), Postives = 93/189 (49.21%), Query Frame = 0


Query: 129 RPVTVITFDIETTGFSRDLDRIVEIALQDLSGGE-NSTFQTLINPECYIPNSVVH--GIT 188
           +  T + FD+ETTG S   D+I+E+A   +  GE    F+   NP   +  ++++   IT
Sbjct: 418 KDATYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHIT 477

Query: 189 SRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIP 248
             M+   D P ++E++    +++       G  + VAHNA +FD+ F+   ++R      
Sbjct: 478 DDML--VDAPEIEEVLTEFKEWV-------GDAIFVAHNA-SFDMGFIDTGYERLGFGPS 537

Query: 249 PNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL 308
            N      ++   +L ++ +++  K  L  L + Y + L    HRA+ D  + + I  ++
Sbjct: 538 TN-----GVIDTLELSRTINTEYGKHGLNFLAKKYGVELT-QHHRAIYDTEATAYIFIKM 590

Query: 309 TFELK-LGI 314
             ++K LG+
Sbjct: 598 VQQMKELGV 590

[Close]

BLAST of Tan0021985 vs. NCBI nr
Match: KAG6590475.1 (Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024006.1 Exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 596.3 bits (1536), Expect = 1.6e-166
Identity = 297/332 (89.46%), Postives = 316/332 (95.18%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG +KRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC VSINKSEK+ TQKLQ C+IQ+T
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I+K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMKELIPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           SVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Sbjct: 241 SVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKKN 333
           ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Sbjct: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Tan0021985 vs. NCBI nr
Match: XP_022961373.1 (exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata] >XP_022961374.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 594.3 bits (1531), Expect = 6.3e-166
Identity = 296/332 (89.16%), Postives = 315/332 (94.88%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G R Y+LEGG +KRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRTYNLEGGQDKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC VSINKSEK+ TQKLQ C+IQ+T
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I+K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMKELIPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           SVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Sbjct: 241 SVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKKN 333
           ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Sbjct: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Tan0021985 vs. NCBI nr
Match: XP_023515555.1 (exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 594.0 bits (1530), Expect = 8.2e-166
Identity = 296/332 (89.16%), Postives = 314/332 (94.58%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG NKRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQNKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC +SINKSEK+ TQKLQ C+IQ+T
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTISINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 ITKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMKELIPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           SVDIP NWLFFDNILLARQLMKS+DSKI KISLQALREYYNIPLVGSAHRAMSDV +LS+
Sbjct: 241 SVDIPLNWLFFDNILLARQLMKSTDSKIKKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKKN 333
           ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Sbjct: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Tan0021985 vs. NCBI nr
Match: XP_022968752.1 (exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima] >XP_022968753.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 590.9 bits (1522), Expect = 6.9e-165
Identity = 296/331 (89.43%), Postives = 312/331 (94.26%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MIT  MCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG +KRW
Sbjct: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS+TTKAGRKAKTNPSSKPSNIRNEILEE +STSC VSINKSEK  TQKLQ C+IQ+T
Sbjct: 61  TRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           IIK+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMKELIPILLQF++SRQKPDGYVLLVAHNAR FDVPFLLKEF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           SVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Sbjct: 241 SVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKK 332
           ILQRLTF+LKLGIPDL+ERSFT SDLINKKK
Sbjct: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKKK 331

[Close]

BLAST of Tan0021985 vs. NCBI nr
Match: XP_038878496.1 (exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida] >XP_038878497.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 577.4 bits (1487), Expect = 7.9e-161
Identity = 295/334 (88.32%), Postives = 306/334 (91.62%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MI  PMCFSILR PKFGV TLANLWR NFHPL RN  HS W+DQ G RIY+LEGG NKRW
Sbjct: 1   MILAPMCFSILRFPKFGVPTLANLWRENFHPLNRNCYHSSWHDQLGFRIYNLEGGQNKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
            RKS+TTKAGRKAK NPSSKP+NIRNEILEE ISTSC VSINKSEKSETQKLQYCDIQQ 
Sbjct: 61  IRKSMTTKAGRKAKANPSSKPTNIRNEILEESISTSCTVSINKSEKSETQKLQYCDIQQL 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           IIKNKELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPNSV
Sbjct: 121 IIKNKELARPVTVITFDIETTGFSRNLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSR--QKPDGYVLLVAHNARTFDVPFLLKEFK 240
           VHGIT+ MVSRPDVPRMKELIPILLQF+ SR  QKPDGYVLLVAHNARTFDVPFLLKEF 
Sbjct: 181 VHGITNHMVSRPDVPRMKELIPILLQFVESRQKQKPDGYVLLVAHNARTFDVPFLLKEFS 240

Query: 241 RCSVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSL 300
           RCS DIPPNW FFD+I LARQLMKSSDSKITKISLQALREYY+I LVGSAHRAMSDV SL
Sbjct: 241 RCSFDIPPNWRFFDSIPLARQLMKSSDSKITKISLQALREYYDIQLVGSAHRAMSDVRSL 300

Query: 301 SMILQRLTFELKLGIPDLVERSFTASDLINKKKN 333
           S+ILQRLTFELKLGI DL+ERSFTASDLINKKKN
Sbjct: 301 SLILQRLTFELKLGISDLIERSFTASDLINKKKN 334

[Close]

BLAST of Tan0021985 vs. ExPASy TrEMBL
Match: A0A6J1HDU6 (exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111461962 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 3.0e-166
Identity = 296/332 (89.16%), Postives = 315/332 (94.88%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MIT PMCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G R Y+LEGG +KRW
Sbjct: 1   MITAPMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRTYNLEGGQDKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS++TKAGRKAKT+PSSKPSNIRNEILEE +STSC VSINKSEK+ TQKLQ C+IQ+T
Sbjct: 61  TRKSMSTKAGRKAKTDPSSKPSNIRNEILEESVSTSCTVSINKSEKNGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           I+K+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IVKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMKELIPILLQFI+SRQKPDGYVLLVAHNARTFDVPFLLKEF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFIKSRQKPDGYVLLVAHNARTFDVPFLLKEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           SVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Sbjct: 241 SVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKKN 333
           ILQRLTF+LKLGIPDL+ERSFT SDLINKKKN
Sbjct: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKKKN 332

[Close]

BLAST of Tan0021985 vs. ExPASy TrEMBL
Match: A0A6J1HUD7 (exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467897 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.3e-165
Identity = 296/331 (89.43%), Postives = 312/331 (94.26%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MIT  MCFSILRVPKFGV TLANLWR NFHPL RNYGHS WYDQ G RIY+LEGG +KRW
Sbjct: 1   MITASMCFSILRVPKFGVPTLANLWRENFHPLNRNYGHSSWYDQLGFRIYNLEGGQDKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS+TTKAGRKAKTNPSSKPSNIRNEILEE +STSC VSINKSEK  TQKLQ C+IQ+T
Sbjct: 61  TRKSMTTKAGRKAKTNPSSKPSNIRNEILEESVSTSCTVSINKSEKYGTQKLQCCNIQET 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
           IIK+KELARPVTVITFDIETTGFSR+LDRIVEIALQDLSGGENSTFQTLINPECYIPN+V
Sbjct: 121 IIKDKELARPVTVITFDIETTGFSRELDRIVEIALQDLSGGENSTFQTLINPECYIPNAV 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMKELIPILLQF++SRQKPDGYVLLVAHNAR FDVPFLLKEF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKELIPILLQFVKSRQKPDGYVLLVAHNARIFDVPFLLKEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           SVDIP NWLFFDNILLARQLMKS+DSKITKISLQALREYYNIPLVGSAHRAMSDV +LS+
Sbjct: 241 SVDIPLNWLFFDNILLARQLMKSTDSKITKISLQALREYYNIPLVGSAHRAMSDVRTLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKK 332
           ILQRLTF+LKLGIPDL+ERSFT SDLINKKK
Sbjct: 301 ILQRLTFDLKLGIPDLIERSFTTSDLINKKK 331

[Close]

BLAST of Tan0021985 vs. ExPASy TrEMBL
Match: A0A6J1C1V8 (exonuclease DPD1, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007515 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.3e-158
Identity = 281/332 (84.64%), Postives = 300/332 (90.36%), Query Frame = 0


Query: 1   MITVPMCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRW 60
           MITVPMCFSILRVPKFGVHTLAN WR NFHPL RNYGHS WYDQ   RIY+LEGG NKRW
Sbjct: 1   MITVPMCFSILRVPKFGVHTLANFWRTNFHPLNRNYGHSSWYDQLCFRIYNLEGGQNKRW 60

Query: 61  TRKSVTTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQT 120
           TRKS+TTKAGRK K NPSSKPS+IRNEILE  +STSC VSINK+EKSETQKLQYCDIQQT
Sbjct: 61  TRKSITTKAGRKVKNNPSSKPSDIRNEILEGSVSTSCTVSINKTEKSETQKLQYCDIQQT 120

Query: 121 IIKNKELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSV 180
             K KEL RPVTVI FDIETTGFSR  DRIVEIA QDLSGGENSTFQTLINPECYIPNS+
Sbjct: 121 FTKKKELTRPVTVIAFDIETTGFSRKKDRIVEIAFQDLSGGENSTFQTLINPECYIPNSL 180

Query: 181 VHGITSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRC 240
           VHGITSRMVSRPDVPRMK+LIPILLQF+ SRQKPDGY+LLVAHNARTFDVPFLL EF RC
Sbjct: 181 VHGITSRMVSRPDVPRMKDLIPILLQFVLSRQKPDGYILLVAHNARTFDVPFLLNEFSRC 240

Query: 241 SVDIPPNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSM 300
           S DIP +WLF DN++LARQLM SSDSK++KISLQALREYY+IPLVGSAHRAMSDV SLS+
Sbjct: 241 SFDIPQDWLFLDNMILARQLMISSDSKLSKISLQALREYYSIPLVGSAHRAMSDVMSLSL 300

Query: 301 ILQRLTFELKLGIPDLVERSFTASDLINKKKN 333
           ILQRLTF+LKL IPDL+ERSFTASDLI K K+
Sbjct: 301 ILQRLTFDLKLEIPDLIERSFTASDLIKKNKD 332

[Close]

BLAST of Tan0021985 vs. ExPASy TrEMBL
Match: A0A0A0LVY3 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569080 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.7e-141
Identity = 256/326 (78.53%), Postives = 280/326 (85.89%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI R PK+GV  LANLWR NFHPL RN+GH+CWYDQ   RIY+LEGG NKRWTRKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           TTKAG KAKTNPSSKP+NIRNEIL+E +  SC V+INKSEKSETQKLQYCDIQ TIIK+K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGIT 185
           E A  VTVITFDIETTGFSR+LDRIVEIA QDLSGGENSTFQTLINP+CYI NS +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 SRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIP 245
           +RMV  P VPRM+ELIPI+LQF++SRQKP GYVLLVAHNARTFDVPFLL EF R SVDIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 246 PNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL 305
            NWLFFD + LARQLMK SDSKITKI+LQAL EYY I L G AHRA+SDV  LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 306 TFELKLGIPDLVERSFTASDLINKKK 332
           TF+LKL I DLVER+FT  DLINKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKK 326

[Close]

BLAST of Tan0021985 vs. ExPASy TrEMBL
Match: A0A0N9LRH7 (Exonuclease DPD1 OS=Cucumis sativus OX=3659 GN=DPD1 PE=2 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.7e-140
Identity = 255/326 (78.22%), Postives = 279/326 (85.58%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI R PK+GV  LANLWR NFHPL RN+GH+CWYDQ   RIY+LEGG NKRWTRKS+
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           TTKAG KAKTNPSSKP+NIRNEIL+E +  SC V+INKSEKSETQKLQYCDIQ TIIK+K
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECYIPNSVVHGIT 185
           E A  VTVITFDIETTGFSR+LDRIVEIA QDLSGGENSTFQTLINP+CYI NS +HGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 186 SRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDIP 245
           +RMV  P VP M+ELIPI+LQF++SRQKP GYVLLVAHNARTFDVPFLL EF R SVDIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 246 PNWLFFDNILLARQLMKSSDSKITKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQRL 305
            NWLFFD + LARQLMK SDSKITKI+LQAL EYY I L G AHRA+SDV  LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 306 TFELKLGIPDLVERSFTASDLINKKK 332
           TF+LKL I DLVER+FT  DLINKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKK 326

[Close]

BLAST of Tan0021985 vs. TAIR 10
Match: AT5G26940.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.8e-63
Identity = 138/323 (42.72%), Postives = 202/323 (62.54%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           +T       T   S+ SN ++ +L   +  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDI 245
            + MV RP+VPRM+ELIPI L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFELKLGIPDLVERSFTASDL 327
           +LT +LKL + DLV R  TASD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Tan0021985 vs. TAIR 10
Match: AT5G26940.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.8e-63
Identity = 138/323 (42.72%), Postives = 202/323 (62.54%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           +T       T   S+ SN ++ +L   +  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDI 245
            + MV RP+VPRM+ELIPI L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFELKLGIPDLVERSFTASDL 327
           +LT +LKL + DLV R  TASD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Tan0021985 vs. TAIR 10
Match: AT5G26940.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.8e-63
Identity = 138/323 (42.72%), Postives = 202/323 (62.54%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           +T       T   S+ SN ++ +L   +  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDI 245
            + MV RP+VPRM+ELIPI L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFELKLGIPDLVERSFTASDL 327
           +LT +LKL + DLV R  TASD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of Tan0021985 vs. TAIR 10
Match: AT5G26940.4 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.8e-63
Identity = 138/323 (42.72%), Postives = 202/323 (62.54%), Query Frame = 0


Query: 6   MCFSILRVPKFGVHTLANLWRVNFHPLKRNYGHSCWYDQFGSRIYSLEGGPNKRWTRKSV 65
           MC SI +V +  +H+  +      H   +N   S        R  S++G    RW R++V
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 66  TTKAGRKAKTNPSSKPSNIRNEILEEPISTSCAVSINKSEKSETQKLQYCDIQQTIIKNK 125
           +T       T   S+ SN ++ +L   +  +  +     E+S T+   + ++QQ + ++K
Sbjct: 61  ST-------TTQGSR-SNTKSSVLGGTVPVTRII----DEESRTKVQPFGNLQQRLAQDK 120

Query: 126 ELARPVTVITFDIETTGFSRDLDRIVEIALQDLSGGENSTFQTLINPECY-IPNSVVHGI 185
           +L++ +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    I N+ +HGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 186 TSRMVSRPDVPRMKELIPILLQFIRSRQKPDGYVLLVAHNARTFDVPFLLKEFKRCSVDI 245
            + MV RP+VPRM+ELIPI L+++ SRQKP GYV+LVAHN ++FD  FL+ EF RCS +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 246 PPNWLFFDNILLARQLMKSSDSKI-TKISLQALREYYNIPLVGSAHRAMSDVWSLSMILQ 305
           P NWL  D++ LAR+ MKS +  +    SL+AL +YY++   G AHRA+SDV  LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 306 RLTFELKLGIPDLVERSFTASDL 327
           +LT +LKL + DLV R  TASD+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

The following BLAST results are available for this feature:

BLAST of Tan0021985 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q682U6	6.7e-62	42.72	Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q895K2	3.4e-13	33.33	DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) ...	[more]
Q8RA32	5.4e-11	30.16	DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongens...	[more]
Q8XJR3	1.2e-10	32.37	DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) OX=...	[more]
A7X1P4	1.2e-07	25.40	DNA polymerase III PolC-type OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)...	[more]

BLAST of Tan0021985 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6590475.1	1.6e-166	89.46	Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma s...	[more]
XP_022961373.1	6.3e-166	89.16	exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata] >XP_022961374...	[more]
XP_023515555.1	8.2e-166	89.16	exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022968752.1	6.9e-165	89.43	exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima] >XP_022968753.1...	[more]
XP_038878496.1	7.9e-161	88.32	exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida] >XP...	[more]

BLAST of Tan0021985 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDU6	3.0e-166	89.16	exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HUD7	3.3e-165	89.43	exonuclease DPD1, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1C1V8	2.3e-158	84.64	exonuclease DPD1, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0LVY3	5.7e-141	78.53	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569080...	[more]
A0A0N9LRH7	1.7e-140	78.22	Exonuclease DPD1 OS=Cucumis sativus OX=3659 GN=DPD1 PE=2 SV=1	[more]

BLAST of Tan0021985 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26940.1	4.8e-63	42.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G26940.2	4.8e-63	42.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G26940.3	4.8e-63	42.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G26940.4	4.8e-63	42.72	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 132..311 e-value: 7.1E-27 score: 105.3
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 135..295 e-value: 5.9E-19 score: 69.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 131..310 e-value: 7.7E-42 score: 145.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..83
None	No IPR available	PANTHER	PTHR13058:SF23	POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED	coord: 3..329
None	No IPR available	CDD	cd06127	DEDDh	coord: 136..303 e-value: 1.52899E-39 score: 135.121
IPR040393	Three-prime repair exonuclease 1/2	PANTHER	PTHR13058	THREE PRIME REPAIR EXONUCLEASE 1, 2	coord: 3..329
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 129..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021985.1	Tan0021985.1	mRNA
Tan0021985.2	Tan0021985.2	mRNA
Tan0021985.3	Tan0021985.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000738	DNA catabolic process, exonucleolytic
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0008296	3'-5'-exodeoxyribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008408	3'-5' exonuclease activity