Tan0021932 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATTCCCGAACTGGCTCAAAGCACGGTTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATACGAAGGTATTTCCAGGAAGATGATGTTGGTAATATCCTCCAAATCCCACGTTACGGGATACATAATAATGACGAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGTTTATCGCCTGGGCCTCCAACAACGACTAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAAGAACTTTTGGAAGTCATTATGGAGTATCCAGATCCCACACAGAATTAAAATTTGCTCATGGAAAATTATCCAGAGTTGCTTACCAATGAAAGACAACTTAATTCGTCGGGGTTTGGAAATCAACCCATAG ATGGTGATTCCCGAACTGGCTCAAAGCACGGTTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATACGAAGGTATTTCCAGGAAGATGATGTTGGTAATATCCTCCAAATCCCACGTTACGGGATACATAATAATGACGAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGTTTATCGCCTGGGCCTCCAACAACGACTAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAAGAACTTTTGGAAGTCATTATGGAGTATCCAGATCCCACACAGAATTAAAATTTGCTCATGGAAAATTATCCAGAGTTGCTTACCAATGAAAGACAACTTAATTCGTCGGGGTTTGGAAATCAACCCATAG ATGGTGATTCCCGAACTGGCTCAAAGCACGGTTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATACGAAGGTATTTCCAGGAAGATGATGTTGGTAATATCCTCCAAATCCCACGTTACGGGATACATAATAATGACGAAATTGTTTGGAAGTATAATCCACGTGGTATCTTTACTGTCAAGAGTGTTTATCGCCTGGGCCTCCAACAACGACTAGCTCAGGAAGCCTCAAGTTCTAACAGTGAGGGTGTTAAGAACTTTTGGAAGTCATTATGGAGTATCCAGATCCCACACAGAATTAAAATTTGCTCATGGAAAATTATCCAGAGTTGCTTACCAATGAAAGACAACTTAATTCGTCGGGGTTTGGAAATCAACCCATAG MVIPELAQSTVRSLLKEDGEWDVDKIRRYFQEDDVGNILQIPRYGIHNNDEIVWKYNPRGIFTVKSVYRLGLQQRLAQEASSSNSEGVKNFWKSLWSIQIPHRIKICSWKIIQSCLPMKDNLIRRGLEINP Homology
BLAST of Tan0021932 vs. NCBI nr
Match: KAF4401718.1 (hypothetical protein G4B88_000766 [Cannabis sativa]) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 44/120 (36.67%), Postives = 73/120 (60.83%), Query Frame = 0
BLAST of Tan0021932 vs. NCBI nr
Match: XP_023907624.1 (uncharacterized protein LOC112019319 [Quercus suber]) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18 Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of Tan0021932 vs. NCBI nr
Match: XP_023905045.1 (uncharacterized protein LOC112016795 [Quercus suber]) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18 Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 0
BLAST of Tan0021932 vs. NCBI nr
Match: KAF4391976.1 (hypothetical protein F8388_004305 [Cannabis sativa]) HSP 1 Score: 101.3 bits (251), Expect = 6.6e-18 Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of Tan0021932 vs. NCBI nr
Match: XP_030505362.1 (uncharacterized protein LOC115720349 [Cannabis sativa]) HSP 1 Score: 100.9 bits (250), Expect = 8.6e-18 Identity = 47/123 (38.21%), Postives = 71/123 (57.72%), Query Frame = 0
BLAST of Tan0021932 vs. ExPASy TrEMBL
Match: A0A803PPQ0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.8e-20 Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of Tan0021932 vs. ExPASy TrEMBL
Match: A0A803PR93 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.8e-20 Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of Tan0021932 vs. ExPASy TrEMBL
Match: A0A803Q6D6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.2e-19 Identity = 46/128 (35.94%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of Tan0021932 vs. ExPASy TrEMBL
Match: A0A803PLN3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19 Identity = 43/124 (34.68%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of Tan0021932 vs. ExPASy TrEMBL
Match: A0A7J6I3Y4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_000766 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.4e-19 Identity = 44/120 (36.67%), Postives = 73/120 (60.83%), Query Frame = 0
BLAST of Tan0021932 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09 Identity = 33/127 (25.98%), Postives = 58/127 (45.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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