Tan0021857 (gene) Snake gourd v1

Overview


Name	Tan0021857
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Heat shock a protein 1/8
Location	LG11: 6171499 .. 6172498 (+)
RNA-Seq Expression	Tan0021857
Synteny	Tan0021857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCAGAAATTCGGTGGTGGATTGCGCCCCACTGGAACTCCCTCAGTGGGTTGGTCCTTTGTCGTCGTCGTCTCTTCGCTTCTCGCCGGCGCCTCCATCGTCCACAACATCTACAAACCAAATCTTGTACTTTCTCTCTCTCTGTTATGTTTGTATATACTTAACGTGATCATTTGATGATTATGCATAATCGGAAATATGGTCGTGTGTGTGCTGATTGCTGGGTGCAATTTAACTTGATAATGCCTGTAACCTGTTCGATGAAAGGCCCACTTTGTATTTTGTGCCTATTGTTTTCTTATTTGAGTATAAGCATATCATTTCCCGTTTCTGATCGATGGGATTCAGACCAATTGTCTAGCTATGTTCTTAAAATCAATTTCAATTTCAGCTTCTCATCTTTCCAGAAATTTGGCCATGTGTGTTTCGTGTGCAATTTTAATTCGACAGTGCCTGTAACCTGTTTGATGAAAGTTCCACCTTTGTAGTTTATGCTTTTTGTCTTCTAATTTGAGTATTTCCTGTCTCTGATCAATGGAATTCAGAACAACTGTCTAGCTACGCTATTGGAATCATTGTTTCCTTTCTCTTGTGGATTCTCTTTTGTGGTCTTGGTTTTTTTATGTCTTTGTATTCTTTCATTTTTTCTCAATGGAAAAGGTGGGTTGTTTATTAAAAAATATATATAAGTCTGCCATTTCCTGTTTCTGATCAATGGAATTCAGAAAACTGTCTAGCTGTGCTCTTGAAATCAGATATCAATTTCAGCTTCTTCATTCTTCTTCATAATTTACCTTTTTTTTTTTCCAGAAATATTTAGGGATCACCGAGCCATTTTCTGTTTCTTGCTTTTCTTTTATTAGGTTTTCATAAAAAGTTTATAAGCTTGTTCTGTTATACATTTCTCAATTTCTAACTCTTTTCCTTTTTAATGTCTTTGTAGACCTTGCCTCCGGTGGAGAGTGTCCAAACGACGAACAAGAAAGACCCTAATTAA

mRNA sequence

ATGACTCAGAAATTCGGTGGTGGATTGCGCCCCACTGGAACTCCCTCAGTGGGTTGGTCCTTTGTCGTCGTCGTCTCTTCGCTTCTCGCCGGCGCCTCCATCGTCCACAACATCTACAAACCAAATCTTACCTTGCCTCCGGTGGAGAGTGTCCAAACGACGAACAAGAAAGACCCTAATTAA

Coding sequence (CDS)

ATGACTCAGAAATTCGGTGGTGGATTGCGCCCCACTGGAACTCCCTCAGTGGGTTGGTCCTTTGTCGTCGTCGTCTCTTCGCTTCTCGCCGGCGCCTCCATCGTCCACAACATCTACAAACCAAATCTTACCTTGCCTCCGGTGGAGAGTGTCCAAACGACGAACAAGAAAGACCCTAATTAA

Protein sequence

MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKDPN

Homology

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BLAST of Tan0021857 vs. NCBI nr
Match: KAA0037665.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK22809.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKDP 60
          MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVH+IYKPNLTLPP +S QTTNKKDP
Sbjct: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHHIYKPNLTLPPADSAQTTNKKDP 59

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BLAST of Tan0021857 vs. NCBI nr
Match: KAG7016236.1 (hypothetical protein SDJN02_21342, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.5 bits (275), Expect = 4.9e-21
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKD 59
          M +KFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPV+SVQ T+KKD
Sbjct: 1  MARKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVDSVQATSKKD 58

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BLAST of Tan0021857 vs. NCBI nr
Match: KGN51309.1 (hypothetical protein Csa_009362 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 5.5e-20
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQ-TTNKKDP 60
          MTQKFGGGLRPTGTPSVGWSFVVV+SSLLAGASIVHNI+KPNLTLPP +S Q TTNK++P
Sbjct: 1  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIFKPNLTLPPADSAQTTTNKENP 60

[Close]

BLAST of Tan0021857 vs. NCBI nr
Match: XP_030462219.1 (uncharacterized protein LOC115682205 [Syzygium oleosum])

HSP 1 Score: 90.9 bits (224), Expect = 4.1e-15
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1   MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKDP 60
           M Q+FGG  +PTGTPS+ WS VVVV+SLLAGAS+VHNIYKP+LTLPP+ESV+   KK P
Sbjct: 82  MNQRFGGARQPTGTPSLAWSCVVVVASLLAGASVVHNIYKPDLTLPPLESVEEAKKKQP 140

[Close]

BLAST of Tan0021857 vs. NCBI nr
Match: KAB2624078.1 (hypothetical protein D8674_015738 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 90.5 bits (223), Expect = 5.3e-15
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKDP 60
          M +KFGGG  PTGTPS+ WS VVVV+SLLAGAS+VHN+YKP+LTLPPV++V  TN K P
Sbjct: 1  MNRKFGGGRPPTGTPSLAWSSVVVVASLLAGASVVHNLYKPDLTLPPVDAVTGTNSKQP 59

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BLAST of Tan0021857 vs. ExPASy TrEMBL
Match: A0A5A7T878 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00480 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.7e-23
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKDP 60
          MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVH+IYKPNLTLPP +S QTTNKKDP
Sbjct: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHHIYKPNLTLPPADSAQTTNKKDP 59

[Close]

BLAST of Tan0021857 vs. ExPASy TrEMBL
Match: A0A0A0KQX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517080 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-20
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQ-TTNKKDP 60
          MTQKFGGGLRPTGTPSVGWSFVVV+SSLLAGASIVHNI+KPNLTLPP +S Q TTNK++P
Sbjct: 1  MTQKFGGGLRPTGTPSVGWSFVVVISSLLAGASIVHNIFKPNLTLPPADSAQTTTNKENP 60

[Close]

BLAST of Tan0021857 vs. ExPASy TrEMBL
Match: A0A2I0IS49 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_032905 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKD 59
          M +KFGGG  PTGTPS+ WS VVVV SLLAGASIVHNIYKPNLTLPP+ESV    KK+
Sbjct: 1  MNRKFGGGRPPTGTPSLAWSSVVVVVSLLAGASIVHNIYKPNLTLPPIESVDGDKKKE 58

[Close]

BLAST of Tan0021857 vs. ExPASy TrEMBL
Match: A0A5N5H8X5 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_015738 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKDP 60
          M +KFGGG  PTGTPS+ WS VVVV+SLLAGAS+VHN+YKP+LTLPPV++V  TN K P
Sbjct: 1  MNRKFGGGRPPTGTPSLAWSSVVVVASLLAGASVVHNLYKPDLTLPPVDAVTGTNSKQP 59

[Close]

BLAST of Tan0021857 vs. ExPASy TrEMBL
Match: A0A445FZ73 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_049907 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-15
Identity = 42/57 (73.68%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKK 58
          M +KFGGG +PTGTPS+ WS VVVV SLLAGAS+VHNIYKPNLTLPPV+ V +T +K
Sbjct: 20 MNRKFGGGKQPTGTPSLAWSCVVVVFSLLAGASVVHNIYKPNLTLPPVDGVDSTKQK 76

[Close]

BLAST of Tan0021857 vs. TAIR 10
Match: AT4G26055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-14
Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0


Query: 1  MTQKFGGGLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKD 59
          M  KF GG +PTGTPS+ WS VVVV+SLLAGAS+VHNIYKP+LTLP +E+ +   K++
Sbjct: 1  MNNKF-GGKKPTGTPSLAWSTVVVVASLLAGASVVHNIYKPDLTLPQIENDEGDEKEE 57

[Close]

BLAST of Tan0021857 vs. TAIR 10
Match: AT5G57080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 2.0e-12
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 8  GLRPTGTPSVGWSFVVVVSSLLAGASIVHNIYKPNLTLPPVESVQTTNKKD 59
          G  PTGTPS+  S +VVV+SLLAGAS+VHNIYKP+L+LPP+ES +   K D
Sbjct: 7  GKLPTGTPSLAMSTLVVVASLLAGASVVHNIYKPDLSLPPLESSEVAKKDD 57

The following BLAST results are available for this feature:

BLAST of Tan0021857 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021857 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037665.1	2.0e-22	93.22	putative transmembrane protein [Cucumis melo var. makuwa] >TYK22809.1 putative t...	[more]
KAG7016236.1	4.9e-21	91.38	hypothetical protein SDJN02_21342, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN51309.1	5.5e-20	86.67	hypothetical protein Csa_009362 [Cucumis sativus]	[more]
XP_030462219.1	4.1e-15	71.19	uncharacterized protein LOC115682205 [Syzygium oleosum]	[more]
KAB2624078.1	5.3e-15	71.19	hypothetical protein D8674_015738 [Pyrus ussuriensis x Pyrus communis]	[more]

BLAST of Tan0021857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T878	9.7e-23	93.22	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KQX5	2.6e-20	86.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517080 PE=4 SV=1	[more]
A0A2I0IS49	2.6e-15	75.86	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_032905 PE=4 SV=1	[more]
A0A5N5H8X5	2.6e-15	71.19	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A445FZ73	3.4e-15	73.68	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_049907 PE=4 SV=1	[more]

BLAST of Tan0021857 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26055.1	1.3e-14	63.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G57080.1	2.0e-12	64.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027858	Protein BRAWNIN	PFAM	PF14990	DUF4516	coord: 11..50 e-value: 2.4E-16 score: 59.2
IPR027858	Protein BRAWNIN	PANTHER	PTHR28492	HYPOTHETICAL PROTEIN LOC691921	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021857.1	Tan0021857.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034551	mitochondrial respiratory chain complex III assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity