Tan0021623 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGAACGACGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCCCGATTCTGAGCCCTCTACAGTTCCCAAAGACGCCATTTCAAAGCTTGATGATTAAGCTCCATCTTCGTTCTTTTGCCTCGGTATGTATAAATTTATCTTAGTGAGAATGACGGATTAGAGATTACATCGAAATTTCTCAGAGTTTCAAGAGATTTTGAGGGACGGAAGAAGGATCTATTGCTATTCGTTGATTGA ATGAAGGGAACGACGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCCCGATTCTGAGCCCTCTACAATTACATCGAAATTTCTCAGAGTTTCAAGAGATTTTGAGGGACGGAAGAAGGATCTATTGCTATTCGTTGATTGA ATGAAGGGAACGACGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCCCGATTCTGAGCCCTCTACAATTACATCGAAATTTCTCAGAGTTTCAAGAGATTTTGAGGGACGGAAGAAGGATCTATTGCTATTCGTTGATTGA MKGTTKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPDSEPSTITSKFLRVSRDFEGRKKDLLLFVD Homology
BLAST of Tan0021623 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus]) HSP 1 Score: 105.9 bits (263), Expect = 1.5e-19 Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of Tan0021623 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of Tan0021623 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.3 bits (225), Expect = 3.9e-15 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of Tan0021623 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.8 bits (216), Expect = 4.3e-14 Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of Tan0021623 vs. NCBI nr
Match: EXB55018.1 (hypothetical protein L484_007349 [Morus notabilis]) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of Tan0021623 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.4e-20 Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of Tan0021623 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.8e-17 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of Tan0021623 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.9e-09 Identity = 32/56 (57.14%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of Tan0021623 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08 Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of Tan0021623 vs. ExPASy TrEMBL
Match: A0A2P5E3N7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_006040 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.0e-08 Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Tan0021623 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07 Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Tan0021623 vs. TAIR 10
Match: AT3G63160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 5.6e-04 Identity = 18/42 (42.86%), Postives = 29/42 (69.05%), Query Frame = 0
BLAST of Tan0021623 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 ) HSP 1 Score: 40.4 bits (93), Expect = 7.3e-04 Identity = 16/41 (39.02%), Postives = 29/41 (70.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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