Tan0021477 (gene) Snake gourd v1

Overview


Name	Tan0021477
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	polyadenylate-binding protein RBP47-like
Location	LG05: 20280571 .. 20291498 (-)
RNA-Seq Expression	Tan0021477
Synteny	Tan0021477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGTCACCGCCGCCGCCCTCTCTCTCGTAATATTATTTTATTGGAACCTACCATTCACAATAAAACCTCTTTCACATTCCACATCTCCTCCTCTTTCTCTCTCCCTCTAGTCTCTCTCCTTCAGCAGCCTCTCTCTCTCTCTCTCTCTCTCTAACCTGGTCTTACTCCTTCACACCCAGGGCCGTCGTTTCTCGCATATCTCGCCGGAGAGAGAGATAAAAGGAAGAAGGCAACGGAGACGGAGACGGAGTCGGAGACGCTTTGAAGATCATGGCCCAGCCTTCAAACGGTGCTGATCTCAATCCCCAAGCACCTCACCCGCACCACCAATGGTTTCAACAACAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAGCAGCAGATGATGATGTACCCTCCTCAGCATTACGTCGCGTATTCTCACCATCCTTATCAACAACAGCAGCAGCAACAGCAGCCGCCGCAGCAGCAGCAGCAACAGCAAGCTCAGTCGCAGCGACCTCGCAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCCTGGATGGATGAGACCTACCTTCATAACTGCTTTGCTCACACCGGCGAGGTCTAACTTACTTATCGTATCGAGTACTTTTTTTTTCTTAACGAATCTCAATCTGTTATTGTTCTTCGAGTTCCGGTTAGCTTGCTGTAGTGAGATCGATCGGATTTCTTTAATTTTGCGCGCTTATGCGTTCTAGAATTGATTTGAAGTTTGTAAATCTGTGGTTGTTGGCATTATTGTTGCTGCATCTTGTATTGTCCTGAATTGAAATGGTGGTCCAAAACTAGTCTAGCCAATGCGAGAAGAATTGTTACTAAAGAGGGGACAAATCTTAGACTGATTTATTTTTCCATTCATAAACTCAAGAGGGACTAGCATTAGTAATTTTAATTTTAGAATGTGCTTTATTAATTACTATTCCTCTGTCCTTGTTTTGACATTTCAATTATCCTTGACTTCTTAATGATGGAGGCAATTAGATTACAAGTAATTTAAGTGCAATGAGTGAAATTTTGGTCCACAACTAAGTAATTGCTATTTTCACACACAAGTAGTTTAGATTGTCCGAACTGAGTATGTTTAGGACTACTATTAGTCATGATCTAATCATATGCAATGGGATGGAGTAGTTGGGATTGTAACTTTGATTTTTAGCTGCTAGAAACATGGCTATCTCCCCACTTCATCCATACTCTTTGCAATGCTATTGAAATCTATGTTTCCTTCCTCATGATTTCATGAAATGCATATTGGTTTTAAATTAAAATAATGTGTGTTCTCGTTTAAATTAAAACGAGGTGTATTGTTTTCTGAGTTTCTTGTCTTAGAATAATTTGTGGCTCAATTTCTTCAAACAATGTATGATCAGTCTTCAGTGTCATCATATGCTCTTTTGAATGAATTATTGTGTATGGTAATGTATGATTACCATTATTCTTAATTCATCTGTGTAGCATTTTTGAGTGACGTATTGCTTGTTTCTGATTCTAGTTTACGTTGGTCAATGTTTAGATGGATAGCTGCAGACTGTCTTTTATGTTTCCCCTTTGTCTAAATCAATCTCCGTCAAGAGCATCTTTTTTGGTTATCAGTTGACTGAACCGTTTCTCTTCTTTTTGCTTCATGAGCATGCAGGTTTTCTCCGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTATTGCAGAATTATAATGGTGCTATAATGCCAAACACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAGTGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCAGCCGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAGGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGCGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATGCTTCACAAGGTTAGCTTTGGTTCTTCTGGCTTCACTGCCAGGTGTTGTTGTTTCTAAGGAATTGGAAGTCTTTAAATCATCAGTACCTATTTCTATTATAGACTTCTTGAATGAGTGAGCTGATATGCCCCCATCCCTAACACACGTCTAAAAAAAAAAGAAAAAAAAAAGCAGAACACAAAAAGGCATACAAAATTTCCTAAAAAAAGGTATAAAAAATTACCATTCAAAGTTGTCTGGTTTTCAAGCAACAACATTAATTAATAAAAAGATGTGGATGGCCCTTACAGAAGTTTTTCATACTGCGGGCAGTAGAATTGTTTGCAATGGTTCTTTTGACTGTTCCGTATTTTATTCTTCTAGTTTTATGGAAATAATTGAGCAACAAAAGGGGTGATGGTATTGAGGCTAGGGTTTTTATCATTTTTTTTTCTCTTTTTTAATGGATTTCCGTACTTTCGTTGATATATCTTTAGCAATGGATTTATGTTTTAATACAAATTGAACACTTTTAGAATATGAAATCTATTACCAATGGATACATATTTTAATACAAGCTGAACACTTTTAGAATATGAAATCTGTTTTAGTAACATTTTTCAGGACTTTGCATTCTTAATCCAGTGTTTTTTGTTTCACTAAATCTTTCCCCCTCTAAATGCTAAACCATTTCCACATTATTAATTTTCGAGTCTATTGATGAATACCATCAATTTTATCTCCGGTTCTATTATTCTGTTTGTCATGCGTTTTGCCACATTATTCTTTATTATTTGACATCCGAGTTGGATTGTATTGTGACTATTTGGCACTGGTTTTTTCTGGATGACAAGTTTCTTTTTCTTTTTATCTTCCCCTCCGGTTGCAATGATAAGTGAAGTATCATTTCTCAAGAAGTTTATTTAACCAGCTGGCCAGTATTGATGCTTCTGGCTGTATGTCAACTAGACGACTAGAAGTTTAATATTTTCAGCTGACATTTGCGTGGTTCTTTAGACATCCGTCCCAGTAATATTTTTTTCTTTCATGAATAAGTTTTAGACATTAGCATAACGAACATGGAGTTGCATTCTACTTCTTGTGTAGAAGATGTTCTAATGACTAAATACTAATTTATTTTGAAAATTTGTAGGTGTGACTAAACTGTCGTTTATATGTTAATTTGTATTTGAGATGAGATATTAATTCTTATGCCAATTTTGGTTTTTTTTATTTTTTTTAGCTTTGGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGTCCACAATCAGATGGCGAGTCAAACAACACGACTGTTAGTTTATCCCTCCCTATCTCATATTACTTTTCTTTCTGCCAGCACATACCTAACCAACTTGTGCTACTTCAGATTTTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTTAGGCAATCTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATCCCCATTGGAAAAGGATGTGGATTTGTGCAGTTTGCCAACAGGTATTCTTCTTCCTTTTCTGTGGAGCTTTCTTTCGTTAAACATGCAGCTGCCACGCTGATCTTTACATCTTAAAAGTAATTAGAGGTTACAAAAAGGGAAGGTCACTCAGGTCCAAGTTGGATTGACCCGAGAAGTAGCAGTCAGTTTTGGCTTGCCGTAGTTGTTGGCCATATTAATATTGGGTCTAAGATTTATGACCTATATGCCTGTGTCTTCTTTTAGGATATTTTGATTAGGTAGCCTCTTTTCTAGAATATTTGTAGATATGTACTTTTTTATATTAATAATTGTAACTATATATTTTTAAAAAATAATGTCAAGTGGAACATTTTTTAGAAAACCAAATTTGACTTAATCGTAACCAATTCTTCTTCTTCTTCTTTTTCAGCCAAAAAAGAAAGAACATTTTATTGTAATCACTGATTTACTTAATTGATGATTAACCTCGATATTGATTGTGATATTCATGGTAATCACTCATTGGCATAGGCTTTATTCTTCACACTATTTGTTATTATGTTTTATCTGAGAACCAGTTTTTGCAATATTCCATATTCATTTTTTGAAATATTTGATATTCATTTTGTTAATATTTTTAAGAAGCCCTCCTTTTATAGAAAAGTAAACACGTGTTTGTAAGCTAAGAAGCACGGATACGGATACGGATACGAGACATGGATACAACACGACACAAACATGGTGACATGTCCACAGACATGGCAATGACACGTTTATTAAAATATACATTTTTAAAAATATATATAATTTTTATACATGAAGGAAATTCAAATTCAATAACTTTGTACTTTTATATGATTAAAAAAATTAGTTTGATGTATTTCATTCTCAAAATTTATTATCTCGTCCTATGTGTCTATTTAGTATAATTAACAAGTGTTTGATACATGTTGTTGGACTTATATTGACTTTGTACTACTAATGTCTAACATCATATCTATTGTGCTAACAAGTGTCGGAGTGTCCGACACAGGCACATGGCCAAACTAAAGTGTCCATGCTTTTCAGCTAAGCATGAAGGATATTTAGTTAAAGTGAATTATAAGTCAAACTCAAAACTATATAGAAAATTTTCATGTATTAAATCATTTATTTTTTTTAATAAAAAAAGTCTAAAAATTTTAAAAAGAACAGGAGTGTACGAGGCCAACCTCGAGAAGTTGGTGCTTGGCCTTTTGTTAGAGGATAGGCTCAAACCTACCAAGAGGTGTAGGCAAGAAACAAGCTGTGTAGTTCTTAATGGCCCGGTCCAACCTGTTTGTTCACACCATGAACGGTTATGTTAGCATGTGAAAGATTCTAATTTCTTGCAATTGACCTCCAGCCTCCAGTTCATTAGGATCCTTGAAGTTTTATAGAACGGTCAAATTAAATGAGGACATAGCTTGTCGATTCAGAGTGAGATTTTACTAATTTTTCTTGCGATCAATAGTCCAAGAAACTTTGAATGCAAGGTTGTGTTATCAAGCGATTAGGAAGTCTCCCAAGAATGAAATGCAGGATGTACATTTTAGTACCAGCCTTAGTCCCTGACTCCCTGGCTCTTGCATGGGTGGTTTCTTGTTTATAATTTCATTTGTTTCTTTTTTGAATAGAAAAAAAAAAAGAAATAATCAAGGAACATAGAGGCCTGGGAGGTGAGAAATCCCATTTTCTAATTGAAGGATTATACAAAGCACCCTCAACTTAAGTTGAAGTTGCTTATAGAGGTTCAGCAAGTTTACGATCACATTATTTTCTTAGCTCTCTCTTGGTGTAAATTCTCCCCCTTCTTTTGTGATTATAGCCTCACTTCTCTTATCAATCGTTGGGACACTCTTTTGTAAGGGGTTCTCATCCACTTTTTTGTACATTTCATACCATCAATGAAATGAATCACATGTTTCTCATAAAAAAAAAAAGTTGAAGTTACTTATAGAAGCAAAATAGTTACAAAATATGTTGCATTAGGCTCTTCAATTTGAAGGTGTAAACTTGGCACTCAAGTCAGACACGGGTGTTGTTCTTTAATGATACAACAAGCTACCTTTTGCACGGTGCCTAAAATGAGCTGCTGAACACGATTGGAGGAAACAATTATCCTATATGGTTTCCTTCAAATTTAAAGCAGCGAAATTTTGATTCATTCCAAATTGTTTTGAACTAATTCTCTCAATTTGAAGCTGTAAACCATACAACTTCACAAAAAAAAAAATTCATTATAAGTAGTTTTGTAATTAGCTTTTAGCCTTTATTCTTGCTGATTGGGCGCCTTTTTTATATCTAAAAAACGATCTGATGGTTTCTTACTAAAACTATGAACTTCTTCGTAACCTATCTTAGGTGTTAAGGCTTTTGTAAACCAAAGTCCAGTATAATTTTTTACTTCTTTCAGAACACTTCGATCCCAAATCAACTTAGCTGAAATCTAAAAGAACGGATATAGACACGGCTTAGCATGACGATATGCCCATTTCTAAAAAAACTAGGACACAGATACCTTGGAGATACACTTATTTTTTAGGATGTATGTCAATTTGACATAAAAATACTAAATGTATTCCACTAATACAATAGTACAAAATACATTATCCAACATTCACCACATCTTTTTCTTCTTTGTGAATTGCATATAGAAGGGAAGGAAGACTAGTTAGGGTTTCTATTTTTTTAACTTTTAATGACTTTTTGTTGACTTTTTTTTTGGTTTTATAAATTCAAATTAGATGGGACTGCCCAATGAAGTTCATATTTTTTTTTTCCCTTGAAATGCTTGCTTGGATGGTTTAAGTTTGCAATTGTACGTTGATTCACACCAAAGGTTGTGCCCTTTTCTGAGCTAATGTGTCTCTGGTGCCAACTTCTCCAACGTCATTAATGGCAAGCCAAGAGATAAAATCTTAGCTTCTAGAGGTCCCAGAAAAGGAGATCCTCTTTCTTCATTCCTTCTCCATTCCTCTTCATTGCTCTTCATTGTTAGGGCGGATTGCTTTAGTAGACTCCTCTCTCAAAGCTCCTCTTTTGGTCTTACCAAGGGATTTCATTTAGGGAGATCTCCCCCATCCACGAAGCGTTTAGAACTTTTAGACCCTTCTGTATTATTTTATTCCATTTTTCTTCATGAAATCTTGGTTTTTGGATTAAAAACCCCTATTCAATATTATCAACATCTTTAAGAAAGCTTTAGAGCTTAATATTGATTGTGGAAAATTAGAATTGGGGATAAATAATGCTCTGATTCATCCTTCAGAGCTTGTATGCACAGATTTGCTCTGCTCCATCTTCTTTTGGGCCCCTATTGCTTATATAATAGACAACAAGCTTGAAAAATGGAGAAAGGCTAGTCTTACAATCGTCCAAGTGACATCCATGGATTCATATATCTCCTTGGCTGGATTCATATCCTTGCACCTCATTAAAGGTCCTTGGAAGTCTATTTTCTTTTCAAGTATAAAGGCTTGATGCCCGACGTTTCTTCCACCAAGTTGTTTCATGCTTCCTAGATTCTTCTCTCACTCCAACAGGAAGATCTCACTGATACATGGAACACTCCACACATAATTAGGATCTCAACGTTCGAAGATTCTTCTTGGAAGAGGGTTTCACTGGGTGTGGGCTTCCCTAACAAATTTTCTATCATCATCTCACCTCTCAGATGATCCAGATGGCCCCTAGAACCTTCCAGCTTCTGCTTGGTTTGCTCCCTCTCCAATGAATTAAAACAAGGGTTTTGCTTCTCTCTTTATAGTGTACAGTAAACTTGGGCATGCAAGTTCCTGAAAAAAGTTAAGTTCTTATGGGAAATTAATCGTGAGAGTATTCTACTAGCACACACTATATGATCCAGAAGAGATATCTAACACGAGCTCTCTCTTTGGGATGTTGGATCTTACCTTGTGCATGAAAGGGACATAGACGCAAGGCAACCTATTCCTCAATTGTCTCTTTGCCAACAAATACTGTCCTATGCTTCCTTTAAATGTCACATAGCAACAAATTGAGAACTCTAAACTGCTGAGTGTGTTTTCTGAAAATGCTTGCTTAGATTAAAATTTTAAACAATTTTTTGTAGTTGTTTAATCTATAGGTTGTACAGATGAATGTTTTTTGAAAAGTACAGATGGATGTTTTTCATTCTCATACTTAATCAACTTTTCATTTATATCGTTATAAAAATATAATGCTTTCGATCAATTTATACTTGAGAAAATGTCAAATTTATATGGACACTGACTTGAGAAAATGTCAAAGAAAGCATATAATAAGTGCAAATTATTCTGTATTTTTTTTTTCTTTTGGTTCTTGTTTCTAGAAATTGTTATTAGATGTCCCAATTCCAAGAGCATTTTCTGAGTCAGAAACATTTTATAGTTTTTAAAAATAAACATCAATTTTTAAATATAACTTTCAAACAATGCCACGGTCAAGGTTCCAAGTTTTCATGCCATTTTTTGTGGAATGAATGATATCTTTATTGTTCCTTTTTGTTTTAACCAATCCTCAGAATAATGCTCTCCAATAGCAAAATGAGCCACGCTCTGAGCTGCTATATTTCGTATGAAGGAACAAAGAAAATTCTAAAATCCTCACTGAAATATTCAAGTCACATATATCACTAACAATAGATGAAACATTAGATTTTTTACCTCTTTTTCTTGAAAAGCTTTTCCACTGTCAAGGAGTACAATCCAGCATGAATTGCGTAAATACTAGCCTCCATTAGACTCGATTTAGTGGCTAGAGCCTCAGCAATTGAAACCAAAAAGAACATTATCTAACCTTGGACAATCGTAGCCACCGCTCATCCCATTTTAGGGTTCTCATTCCAACTAGGCTACCTATATTGATCAACAATTTTAAAACTAAAAAACATAGGACATATATGATTTTGCACTGTGACAACTTTACCTTAATTTAAGGTCTATTAAGATGACAGATGCCAAAAGGTTGAACTCTGTGATTGTTTGCATTGCCGGTATTTTTATTCTCTTCCTGCCTTCTTCACAACAATCTGTGGTTTGGCAGCTTGCTGCAAGCATGAATTTCTACATTACTTCCACGACTCTTATAGACCAATTCTCAGCAATCATTGTGATGGAAGAATGTCATGGAAGAAATATATGATTATTTCCTACGATCTTTTCAAAAAGTGATAAGGTTGTTAACTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGCTCATTTCTTACGCTTGAGAGTCAATTTAATTGAACCTTGAGCAGTGTAATTAATTACCCCCCATGAGTTGACTGGCTGTTTTTTTTTCTTATTATTCTTTTAAAGATTTGTGGCTAAGTGGTTGGCACTTTTGTGGTTGGAAAAGGTACTGTTGGGGTAAAAGTTCTTGGGGTGGTGTTGGGCGTCCGTTTTAGCTGAGGATTCAGCATTTCAGCGTTGTGTTGGACACTTTTTGGATTAATTTTGTGGTTAACTGTTTCCGTGATTGGATTCTAATCATTGTATTGGCTAGATTCATAGTGATATATTGACATGCGTACTTTAAACAAATATTTTGCTTATTCCAGCTTGATATAAACCGACTCAATCATCCAATTACATCAAAGAAAATGAGTTTTTCCTACGACACTATAATCGTGGGTACTAGTGGGCAGAACATGACCTATCTTTGCATACATTTTTTTTCCCTTTTTTGTAGGAAGAATGCTGAGGATGCAATACAGGGACTGAATGGAACAGTTATTGGCAAGCAAACTGTTCGTCTTTCCTGGGGCCGAAGTACAGGGAACAAGCAGGTTTGATTATGTGCTTTTTCTTTTTAAACGTTTGTCCCATTTTACTCGTCTTATGAATATTTTTAAATTATTAGTTGTTAACATATGGCCTAAGTGTGCGTACAAGCTGGTCCGGATACTCATGACTGTCAAGAAAACATATGGCCTAGGACCTTTAGAAAATTAGTGTAAAAATGGGATTTGATGACTAAGCATATTGAATTATGACACTTATGTGGTGTGGGGATATCTCATCTGCCCTCTTTTCTGTGCTCTGTTAATAATATTTTCTGTTCCTATAAAAAAAATCATGACATCTATTAGACACTCGTTAAATACATATTGATAATCCAACATCTGATGCACCCATGTAGACAACTTTGAAGTTTGAATATATGTCGGACATTTATTGGACGAAAGGAATAATGCAAATAAAACGAAATACATGGGAAATTTATAAATTTATTGAACTTTTTTCTTAAGCTAATAAACAAATGAACGTTGATTTTCAAAATCTGTTTACTTGATGTTGAATCATCTAGAGAAATGTTCCTTTAGTTTTTTTCTTTTTTCAAAATCTTTTGACCTTTGTCACGAGGCACTGCATCATACTGCTTGTAATTAGTTTCTTCAACTCTTTGATTTATAGCACATTTCATGGTCTGTTTCACACTGTGCACCATTGTCAGTCCTCAGGCATCTTTTTCTTTGACCTCTCTTAGCAGGAATATTCGTAGCTTTTTTCTCAGCTATTATGAAAACATTTTTTTTAGGGTATTTTATCTTCAAAAGCTTTCAACGATGAACAACAACCATTTATTTTTATTTTATTTTTTCCCTTTCTGTTATCCTATCCCAAATAGTTGATTTTATGTTGGCAGTGGAGAGGTGATTCTAATAATAATAACCAATGGAATGGGGGGCGTTATGGAGGGCAAGGGTATGGTGGATATGGTGGTTACTACTCTGTACCACAGCATCAAGACACAAACATGCAAGCGACAGCTGCTGCAGTTAATGGGTCATCTTGAGAAAAGGGTATGGCCATTGCCACCATCAAAACTGAAATCTGAGCATTCAAATTCAAAATACAAATCTCTTAGCTATCGAATATATTGACTTTGTAATAGGGAACTTATTTAAGTTGTGCTTAGCTGAATTTTTATTTGCTGAATCATATGGCTTGATAACATTATTACTGCCTTACTGGAGTCATGCTTGAGACTAGACAGACAAGACTGCTTGTAGCTAAGCTAGCTCATCTGAACAATTTTGGGGCCTGTGGGTGGATTTTTCTTTGTTGACGGGGGTACTTTTTTTCTTTCCTTTTTCTTTTTTCCTTTTTTTTTTTTTCATAGTTTAAATTTACTGATTATTATTATTATTATTCTTTTTTCATACATTTATGCTTGGGAGCCATACTCTGAGAATATCCTAATGACATGGAATCTACAGATTATTATTATTAGTTTAAA

mRNA sequence

ACCGTCACCGCCGCCGCCCTCTCTCTCGTAATATTATTTTATTGGAACCTACCATTCACAATAAAACCTCTTTCACATTCCACATCTCCTCCTCTTTCTCTCTCCCTCTAGTCTCTCTCCTTCAGCAGCCTCTCTCTCTCTCTCTCTCTCTCTAACCTGGTCTTACTCCTTCACACCCAGGGCCGTCGTTTCTCGCATATCTCGCCGGAGAGAGAGATAAAAGGAAGAAGGCAACGGAGACGGAGACGGAGTCGGAGACGCTTTGAAGATCATGGCCCAGCCTTCAAACGGTGCTGATCTCAATCCCCAAGCACCTCACCCGCACCACCAATGGTTTCAACAACAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAGCAGCAGATGATGATGTACCCTCCTCAGCATTACGTCGCGTATTCTCACCATCCTTATCAACAACAGCAGCAGCAACAGCAGCCGCCGCAGCAGCAGCAGCAACAGCAAGCTCAGTCGCAGCGACCTCGCAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCCTGGATGGATGAGACCTACCTTCATAACTGCTTTGCTCACACCGGCGAGGTTTTCTCCGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTATTGCAGAATTATAATGGTGCTATAATGCCAAACACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAGTGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCAGCCGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAGGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGCGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATGCTTCACAAGCTTTGGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGTCCACAATCAGATGGCGAGTCAAACAACACGACTATTTTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTTAGGCAATCTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATCCCCATTGGAAAAGGATGTGGATTTGTGCAGTTTGCCAACAGGAAGAATGCTGAGGATGCAATACAGGGACTGAATGGAACAGTTATTGGCAAGCAAACTGTTCGTCTTTCCTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGTGATTCTAATAATAATAACCAATGGAATGGGGGGCGTTATGGAGGGCAAGGGTATGGTGGATATGGTGGTTACTACTCTGTACCACAGCATCAAGACACAAACATGCAAGCGACAGCTGCTGCAGTTAATGGGTCATCTTGAGAAAAGGGTATGGCCATTGCCACCATCAAAACTGAAATCTGAGCATTCAAATTCAAAATACAAATCTCTTAGCTATCGAATATATTGACTTTGTAATAGGGAACTTATTTAAGTTGTGCTTAGCTGAATTTTTATTTGCTGAATCATATGGCTTGATAACATTATTACTGCCTTACTGGAGTCATGCTTGAGACTAGACAGACAAGACTGCTTGTAGCTAAGCTAGCTCATCTGAACAATTTTGGGGCCTGTGGGTGGATTTTTCTTTGTTGACGGGGGTACTTTTTTTCTTTCCTTTTTCTTTTTTCCTTTTTTTTTTTTTCATAGTTTAAATTTACTGATTATTATTATTATTATTCTTTTTTCATACATTTATGCTTGGGAGCCATACTCTGAGAATATCCTAATGACATGGAATCTACAGATTATTATTATTAGTTTAAA

Coding sequence (CDS)

ATGGCCCAGCCTTCAAACGGTGCTGATCTCAATCCCCAAGCACCTCACCCGCACCACCAATGGTTTCAACAACAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTACCCTGCCGCCGCCATGGCCATGATGCACCAGCAGCAGATGATGATGTACCCTCCTCAGCATTACGTCGCGTATTCTCACCATCCTTATCAACAACAGCAGCAGCAACAGCAGCCGCCGCAGCAGCAGCAGCAACAGCAAGCTCAGTCGCAGCGACCTCGCAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCCTGGATGGATGAGACCTACCTTCATAACTGCTTTGCTCACACCGGCGAGGTTTTCTCCGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTATTCACATGCAACAGCTGATAAAGTATTGCAGAATTATAATGGTGCTATAATGCCAAACACAGAGCTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAGTGATAGGCGACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCAGCCGATGTAACTGATGCTATGCTGCAAGAAACTTTCTCTAGTAGATACACATCTGTTAAAGGAGCAAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAGGTCCAGGGCTATGACTGAAATGAATGGGATATATTGTTCAAGTAGACCCATGCGCATTGGCGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATGCTTCACAAGCTTTGGTTCTGGCTGGTGGACATGCAAATGGCATGGCTGTTCAGGGTCCACAATCAGATGGCGAGTCAAACAACACGACTATTTTTGTTGGCGGCCTTGATTCTGATGTTAGTGATGAAGATCTTAGGCAATCTTTCTCTAAATTTGGTGAGATTGTCTCTGTGAAAATCCCCATTGGAAAAGGATGTGGATTTGTGCAGTTTGCCAACAGGAAGAATGCTGAGGATGCAATACAGGGACTGAATGGAACAGTTATTGGCAAGCAAACTGTTCGTCTTTCCTGGGGCCGAAGTACAGGGAACAAGCAGTGGAGAGGTGATTCTAATAATAATAACCAATGGAATGGGGGGCGTTATGGAGGGCAAGGGTATGGTGGATATGGTGGTTACTACTCTGTACCACAGCATCAAGACACAAACATGCAAGCGACAGCTGCTGCAGTTAATGGGTCATCTTGA

Protein sequence

MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYVAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVPQHQDTNMQATAAAVNGSS

Homology

[Close]

BLAST of Tan0021477 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 8.3e-145
Identity = 287/438 (65.53%), Postives = 339/438 (77.40%), Query Frame = 0


Query: 6   NGADLNPQAPHPHHQWFQQQQQ----QQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYV 65
           NG D+N Q      Q  QQQQQ    QQYQQQWMAMQYPAAAMAM   QQ MMY  Q+  
Sbjct: 2   NGGDMNQQQQQQQQQHQQQQQQWLAMQQYQQQWMAMQYPAAAMAM---QQQMMYGQQYM- 61

Query: 66  AYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF 125
                PY QQ QQQQ  QQ   Q         Q S+++ KT+WIGDLQ WMDE+YLH+CF
Sbjct: 62  -----PYYQQHQQQQKMQQSPTQ--------IQSSSEDNKTIWIGDLQQWMDESYLHSCF 121

Query: 126 AHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATF 185
           +  GEV SVK+I NKQTGQSE YGFVEF +HA A+KVLQ+YNG +MPNTE PFRLNWA F
Sbjct: 122 SQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGF 181

Query: 186 SASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFV 245
           S  ++R +TGSD SIFVGDLA+DVTD ML++TF+SRY S+KGAKVV+D+N+G SKGYGFV
Sbjct: 182 STGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFV 241

Query: 246 RFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHA-NGMAV 305
           RFGDE+ERSRAMTEMNG+YCSSR MRIGVATPKK S ++Q Y+SQA++L+GG+A NG A 
Sbjct: 242 RFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAAT 301

Query: 306 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 365
            G QSDG+S+NTTIFVGGLDS+V+DE+LRQSF++FGE+VSVKIP GKGCGFVQF++R +A
Sbjct: 302 HGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSA 361

Query: 366 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 425
           ++AIQ L+G +IGKQ VRLSWGRS  NKQ R DS   +QWNGG  G Q YGGYG  Y   
Sbjct: 362 QEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDS--GSQWNGGYNGRQNYGGYG--YGAS 417

Query: 426 QHQDTNMQATAAAVNGSS 439
           Q+QD+ M AT AA   SS
Sbjct: 422 QNQDSGMYATGAAYGASS 417

[Close]

BLAST of Tan0021477 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 3.3e-141
Identity = 286/438 (65.30%), Postives = 330/438 (75.34%), Query Frame = 0


Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQQQYQQQWM-AMQY-PAAAMAMMHQQ 62
           Q +NG+D           N Q P P  QW   QQQQQ QQQWM AMQY PAAAM MM QQ
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW---QQQQQQQQQWMAAMQYPPAAAMMMMQQQ 61

Query: 63  QMMMYPPQHYVAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQP 122
           QM+MYP Q YV Y+  PYQQ   Q       QQ Q Q  +   +GS D+VKTLW+GDL  
Sbjct: 62  QMLMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLH 121

Query: 123 WMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNT 182
           WMDETYLH+CF+HTGEV SVKVI NK T QSEGYGFVEF S A A++VLQNY+G++MPN+
Sbjct: 122 WMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNS 181

Query: 183 ELPFRLNWATFSASDRRP-DTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVID 242
           + PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVID
Sbjct: 182 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVID 241

Query: 243 SNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALV 302
           SN+GRSKGYGFVRFGDENERSRA+TEMNG YCS+R MR+G+ATPK+A   QQ ++SQA++
Sbjct: 242 SNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVI 301

Query: 303 LAGGH-ANGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKG 362
           LAGGH +NG    G QSDGES N TIFVGG+D DV DEDLRQ FS+FGE+VSVKIP+GKG
Sbjct: 302 LAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKG 361

Query: 363 CGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQ 422
           CGFVQFA+RK+AEDAI+ LNGTVIGK TVRLSWGRS  NKQWRGDS    QWNGG   G 
Sbjct: 362 CGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDS--GQQWNGGYSRGH 421

Query: 423 GYGGYGGYYSVPQHQDTN 427
           GY   GGY     H D+N
Sbjct: 422 GYNNGGGY---ANHHDSN 429

[Close]

BLAST of Tan0021477 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 8.9e-139
Identity = 289/435 (66.44%), Postives = 325/435 (74.71%), Query Frame = 0


Query: 10  LNPQAPHPHHQWFQQQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYVAYSHHP 69
           L    P P     QQQQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   
Sbjct: 27  LQQSTPPPQQ---QQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAA 86

Query: 70  YQQQQQQQQPPQQQQQQQ--AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTG 129
           YQQ  Q Q    QQQQQQ     Q+PR     D+VKTLW+GDL  WMDETYLH CF+HT 
Sbjct: 87  YQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTN 146

Query: 130 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSASD 189
           EV SVKVI NKQT QSEGYGFVEF S + A++ LQ+++G  MPN E PFRLNWA+FS  +
Sbjct: 147 EVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGE 206

Query: 190 RR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFG 249
           +R  + G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFG
Sbjct: 207 KRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFG 266

Query: 250 DENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAVQGPQ 309
           DENERSRAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH       G  
Sbjct: 267 DENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG----NGSM 326

Query: 310 SDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAI 369
           SDGESNN+TIFVGGLD+DV++EDL Q FS FGE+VSVKIP+GKGCGFVQFANR++AE+AI
Sbjct: 327 SDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAI 386

Query: 370 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVPQHQD 429
             LNGTVIGK TVRLSWGRS  NKQWR DS   NQWNGG   GQGY    GY     +QD
Sbjct: 387 GNLNGTVIGKNTVRLSWGRSP-NKQWRSDS--GNQWNGGYSRGQGYN--NGY----ANQD 445

Query: 430 TNMQAT-AAAVNGSS 439
           +NM AT AAAV G+S
Sbjct: 447 SNMYATAAAAVPGAS 445

[Close]

BLAST of Tan0021477 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 6.0e-103
Identity = 232/418 (55.50%), Postives = 275/418 (65.79%), Query Frame = 0


Query: 12  PQAPHPHHQWFQQQQQQQYQ-----QQWMAMQYPAAAMAMMHQQQMMMYPPQHYVAYSHH 71
           P  P PH     ++ Q +         W  M+YP   M      QMM  PP       +H
Sbjct: 25  PPYPPPHPPVEVEENQPKTSPTPPPPHW--MRYPPVLM-----PQMMYAPPPPMPFSPYH 84

Query: 72  PYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF--AHT 131
            Y          +  + Q A            E KT+W+GDLQ WMDE YL++ F  A  
Sbjct: 85  QYPNHHHFHHQSRGNKHQNA---------FNGENKTIWVGDLQNWMDEAYLNSAFTSAEE 144

Query: 132 GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSAS 191
            E+ S+KVI NK  G SEGYGFVEF SH  ADKVLQ +NGA MPNT+ PFRLNWA+FS  
Sbjct: 145 REIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTG 204

Query: 192 DRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF 251
           ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRF
Sbjct: 205 EKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRF 264

Query: 252 GDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAVQGP 311
           GDENER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+    A    
Sbjct: 265 GDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAF--T 324

Query: 312 QSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 371
           +S+G++ NTTIFVGGLDS V+DEDL+Q FS+FGEIVSVKIP+GKGCGFVQF NR NAE+A
Sbjct: 325 RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEA 384

Query: 372 IQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVPQ 422
           ++ LNGTVIGKQTVRLSWGR+  NKQ R      NQW    YGGQ Y GYG  Y VPQ
Sbjct: 385 LEKLNGTVIGKQTVRLSWGRNPANKQPR--DKYGNQWVDPYYGGQFYNGYG--YMVPQ 411

[Close]

BLAST of Tan0021477 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 7.4e-101
Identity = 227/422 (53.79%), Postives = 275/422 (65.17%), Query Frame = 0


Query: 9   DLNPQAPHPHHQWFQQQQQQQYQ------QQWMAMQYPAAAMAMMHQQQMMMYPPQHYVA 68
           D  P  P P  Q   ++++ Q +        W  M+YP   + + HQ   MMY P  +  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVI-IPHQ---MMYAPPPFPP 79

Query: 69  YSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCFA 128
           Y  +P       Q    + Q                E KT+W+GDL  WMDE YL++ FA
Sbjct: 80  YHQYPNHHHLHHQSRGNKHQ-----------NAFNGENKTIWVGDLHHWMDEAYLNSSFA 139

Query: 129 --HTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 188
                E+ SVKVI NK  G SEGYGFVEF SH  ADKVL+ +NG  MPNT+ PFRLNWA+
Sbjct: 140 SGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWAS 199

Query: 189 FSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG 248
           FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYG
Sbjct: 200 FSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYG 259

Query: 249 FVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMA 308
           FVRFGDENER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+     
Sbjct: 260 FVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPNGT 319

Query: 309 VQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKN 368
           +  P  +G+  NTTIFVGGLDS V+DEDL+Q F++FGEIVSVKIP+GKGCGFVQF NR N
Sbjct: 320 LTRP--EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPN 379

Query: 369 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSV 422
           AE+A++ LNGTVIGKQTVRLSWGR+  NKQ R      NQW    YGGQ Y GYG  Y V
Sbjct: 380 AEEALEKLNGTVIGKQTVRLSWGRNPANKQPR--DKYGNQWVDPYYGGQFYNGYG--YMV 409

[Close]

BLAST of Tan0021477 vs. NCBI nr
Match: XP_038901011.1 (polyadenylate-binding protein RBP47 [Benincasa hispida])

HSP 1 Score: 800.8 bits (2067), Expect = 5.8e-228
Identity = 410/439 (93.39%), Postives = 422/439 (96.13%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHP-HHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQH 60
           MAQPSNGADLNPQAPHP HHQWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQH
Sbjct: 1   MAQPSNGADLNPQAPHPHHHQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQH 60

Query: 61  YVAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHN 120
           Y+AYSHHPYQQQQQQ Q P QQQ QQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+N
Sbjct: 61  YMAYSHHPYQQQQQQHQQPSQQQHQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNN 120

Query: 121 CFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWA 180
           CFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADK+LQNYNGAIMPNT+LPFRLNWA
Sbjct: 121 CFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKILQNYNGAIMPNTDLPFRLNWA 180

Query: 181 TFSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG 240
           TFS++DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRY SVKGAKVVIDSNSGRSKGYG
Sbjct: 181 TFSSNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYASVKGAKVVIDSNSGRSKGYG 240

Query: 241 FVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMA 300
           FVRF DENER+RAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANG+A
Sbjct: 241 FVRFSDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGIA 300

Query: 301 VQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKN 360
           VQG QSDGESNNTTIFVGGLDSDVSDEDL+Q FSKFG++VSVKIPIGKGCGFVQFANRKN
Sbjct: 301 VQGSQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGDVVSVKIPIGKGCGFVQFANRKN 360

Query: 361 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSV 420
           AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQ YGGYGGYYSV
Sbjct: 361 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQSYGGYGGYYSV 420

Query: 421 PQHQDTNMQATAAAVNGSS 439
           PQHQD NM  TAA+VNGSS
Sbjct: 421 PQHQDANMHPTAASVNGSS 435

[Close]

BLAST of Tan0021477 vs. NCBI nr
Match: XP_022986538.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 795.0 bits (2052), Expect = 3.2e-226
Identity = 409/438 (93.38%), Postives = 418/438 (95.43%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPH QWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60

Query: 61  VAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120
           + YSH PY   QQQ  P QQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC
Sbjct: 61  MTYSHLPY---QQQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120

Query: 121 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 180
           FAH GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNT+LPFRLNWAT
Sbjct: 121 FAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS SDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAV 300
           VRFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHANGMAV
Sbjct: 241 VRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 300

Query: 301 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360
           QG QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 420
           EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQGYGGYGGYYS+P
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQGYGGYGGYYSIP 420

Query: 421 QHQDTNMQATAAAVNGSS 439
           QHQD NM A AAAVNG+S
Sbjct: 421 QHQDANMHAAAAAVNGTS 431

[Close]

BLAST of Tan0021477 vs. NCBI nr
Match: XP_004145357.2 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical protein Csa_006374 [Cucumis sativus])

HSP 1 Score: 791.2 bits (2042), Expect = 4.6e-225
Identity = 409/441 (92.74%), Postives = 421/441 (95.46%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPHHQWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQM+MYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMVMYPPQHY 60

Query: 61  VAYSHHPY-QQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHN 120
           +AYSHHPY QQQQQQQQP  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+N
Sbjct: 61  MAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNN 120

Query: 121 CFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWA 180
           CFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNTELPFRLNWA
Sbjct: 121 CFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWA 180

Query: 181 TFSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG 240
           TFSA+DRRPDTGSDLSIFVGDLAADVTDA+LQETFSSRYTSVKGAKVVIDSNSGRSKGYG
Sbjct: 181 TFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYG 240

Query: 241 FVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMA 300
           FVRFGDENER+RAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH NGMA
Sbjct: 241 FVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMA 300

Query: 301 VQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKN 360
           VQG QSD ESNNTTIFVGGLDSDVSDEDL+Q+FSKFG++VSVKIPIGKGCGFVQFANRKN
Sbjct: 301 VQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKN 360

Query: 361 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSV 420
           AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQ YGGYGGYYSV
Sbjct: 361 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQSYGGYGGYYSV 420

Query: 421 PQHQDTNMQ--ATAAAVNGSS 439
           PQHQD NM   A AAAVNGSS
Sbjct: 421 PQHQDPNMHPTAAAAAVNGSS 437

[Close]

BLAST of Tan0021477 vs. NCBI nr
Match: XP_022943942.1 (polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 790.8 bits (2041), Expect = 6.0e-225
Identity = 408/438 (93.15%), Postives = 417/438 (95.21%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPH QWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60

Query: 61  VAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120
           + YSH PY    QQQ PP QQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC
Sbjct: 61  MTYSHLPY----QQQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120

Query: 121 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 180
           FAH GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNT+LPFRLNWAT
Sbjct: 121 FAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS SDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAV 300
           VRFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHANGMAV
Sbjct: 241 VRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 300

Query: 301 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360
           QG QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 420
           EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQGYGGYGGYY +P
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQGYGGYGGYY-IP 420

Query: 421 QHQDTNMQATAAAVNGSS 439
           QHQD NM A AAAVNG+S
Sbjct: 421 QHQDANMHAAAAAVNGTS 429

[Close]

BLAST of Tan0021477 vs. NCBI nr
Match: XP_022148600.1 (polyadenylate-binding protein RBP47 [Momordica charantia])

HSP 1 Score: 789.3 bits (2037), Expect = 1.7e-224
Identity = 410/439 (93.39%), Postives = 418/439 (95.22%), Query Frame = 0


Query: 2   AQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYV 61
           AQPSNGADLNPQ PHPHHQWF   QQQQYQQQWMAMQYPAAAMAMM QQQMMMYPPQHY+
Sbjct: 3   AQPSNGADLNPQPPHPHHQWF---QQQQYQQQWMAMQYPAAAMAMMQQQQMMMYPPQHYM 62

Query: 62  AYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRR-QGSTDEVKTLWIGDLQPWMDETYLHNC 121
           AYSHHPYQQQQQQ     QQQQQQAQ QRPRR QGSTDEVKTLWIGDLQPWMDETYLH+C
Sbjct: 63  AYSHHPYQQQQQQ----PQQQQQQAQPQRPRRLQGSTDEVKTLWIGDLQPWMDETYLHSC 122

Query: 122 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 181
           F HTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT
Sbjct: 123 FVHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 182

Query: 182 FSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 241
           FSA+DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSR+TSVKGAKVVIDSNSGRSKGYGF
Sbjct: 183 FSATDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGF 242

Query: 242 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAV 301
           VRFGDENER+RAMTEMNG+YCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHANGMAV
Sbjct: 243 VRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 302

Query: 302 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 361
           QG Q DGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 303 QGSQPDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 362

Query: 362 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 421
           EDAIQGLNGTVIGKQT+RLSWGRSTGNKQWRGDS  NNQWNGGRYGGQGYGGY GYYSVP
Sbjct: 363 EDAIQGLNGTVIGKQTIRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQGYGGYSGYYSVP 422

Query: 422 QHQDTNMQATAAA-VNGSS 439
           QHQDTNM ATAAA VNGSS
Sbjct: 423 QHQDTNMNATAAAEVNGSS 432

[Close]

BLAST of Tan0021477 vs. ExPASy TrEMBL
Match: A0A6J1JGT7 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111484248 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 1.5e-226
Identity = 409/438 (93.38%), Postives = 418/438 (95.43%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPH QWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60

Query: 61  VAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120
           + YSH PY   QQQ  P QQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC
Sbjct: 61  MTYSHLPY---QQQPPPLQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120

Query: 121 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 180
           FAH GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNT+LPFRLNWAT
Sbjct: 121 FAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS SDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAV 300
           VRFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHANGMAV
Sbjct: 241 VRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 300

Query: 301 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360
           QG QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 420
           EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQGYGGYGGYYS+P
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQGYGGYGGYYSIP 420

Query: 421 QHQDTNMQATAAAVNGSS 439
           QHQD NM A AAAVNG+S
Sbjct: 421 QHQDANMHAAAAAVNGTS 431

[Close]

BLAST of Tan0021477 vs. ExPASy TrEMBL
Match: A0A6J1FUF1 (polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111448515 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 2.9e-225
Identity = 408/438 (93.15%), Postives = 417/438 (95.21%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPH QWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHQQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60

Query: 61  VAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120
           + YSH PY    QQQ PP QQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC
Sbjct: 61  MTYSHLPY----QQQPPPLQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNC 120

Query: 121 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 180
           FAH GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNT+LPFRLNWAT
Sbjct: 121 FAHIGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTDLPFRLNWAT 180

Query: 181 FSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 240
           FS SDRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGF
Sbjct: 181 FSGSDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRSKGYGF 240

Query: 241 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAV 300
           VRFGDE+ER+RA+TEMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHANGMAV
Sbjct: 241 VRFGDESERTRAVTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 300

Query: 301 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360
           QG QSDGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 301 QGSQSDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 360

Query: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 420
           EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQGYGGYGGYY +P
Sbjct: 361 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQGYGGYGGYY-IP 420

Query: 421 QHQDTNMQATAAAVNGSS 439
           QHQD NM A AAAVNG+S
Sbjct: 421 QHQDANMHAAAAAVNGTS 429

[Close]

BLAST of Tan0021477 vs. ExPASy TrEMBL
Match: A0A6J1D3C6 (polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC111017220 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 8.5e-225
Identity = 410/439 (93.39%), Postives = 418/439 (95.22%), Query Frame = 0


Query: 2   AQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYV 61
           AQPSNGADLNPQ PHPHHQWF   QQQQYQQQWMAMQYPAAAMAMM QQQMMMYPPQHY+
Sbjct: 3   AQPSNGADLNPQPPHPHHQWF---QQQQYQQQWMAMQYPAAAMAMMQQQQMMMYPPQHYM 62

Query: 62  AYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRR-QGSTDEVKTLWIGDLQPWMDETYLHNC 121
           AYSHHPYQQQQQQ     QQQQQQAQ QRPRR QGSTDEVKTLWIGDLQPWMDETYLH+C
Sbjct: 63  AYSHHPYQQQQQQ----PQQQQQQAQPQRPRRLQGSTDEVKTLWIGDLQPWMDETYLHSC 122

Query: 122 FAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 181
           F HTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT
Sbjct: 123 FVHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 182

Query: 182 FSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGF 241
           FSA+DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSR+TSVKGAKVVIDSNSGRSKGYGF
Sbjct: 183 FSATDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRFTSVKGAKVVIDSNSGRSKGYGF 242

Query: 242 VRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAV 301
           VRFGDENER+RAMTEMNG+YCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHANGMAV
Sbjct: 243 VRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHANGMAV 302

Query: 302 QGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNA 361
           QG Q DGESNNTTIFVGGLDSDVSDEDLRQ FSKFGEIVSVKIPIGKGCGFVQFANRKNA
Sbjct: 303 QGSQPDGESNNTTIFVGGLDSDVSDEDLRQPFSKFGEIVSVKIPIGKGCGFVQFANRKNA 362

Query: 362 EDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVP 421
           EDAIQGLNGTVIGKQT+RLSWGRSTGNKQWRGDS  NNQWNGGRYGGQGYGGY GYYSVP
Sbjct: 363 EDAIQGLNGTVIGKQTIRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQGYGGYSGYYSVP 422

Query: 422 QHQDTNMQATAAA-VNGSS 439
           QHQDTNM ATAAA VNGSS
Sbjct: 423 QHQDTNMNATAAAEVNGSS 432

[Close]

BLAST of Tan0021477 vs. ExPASy TrEMBL
Match: A0A1S3C9N4 (polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 7.2e-224
Identity = 406/443 (91.65%), Postives = 419/443 (94.58%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPHHQWF  QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWF--QQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60

Query: 61  VAYSHHPY-QQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHN 120
           +AYSHHPY QQQQQQQQP  QQQQQ AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYL+N
Sbjct: 61  MAYSHHPYQQQQQQQQQPSSQQQQQHAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLNN 120

Query: 121 CFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWA 180
           CFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMPNTELPFRLNWA
Sbjct: 121 CFAHTGEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQNYNGTIMPNTELPFRLNWA 180

Query: 181 TFSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG 240
           TFSA+DRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG
Sbjct: 181 TFSANDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG 240

Query: 241 FVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMA 300
           FVRFGDENER+RAM EMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGH NGMA
Sbjct: 241 FVRFGDENERTRAMAEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMA 300

Query: 301 VQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKN 360
           VQG QSD ESNNTTIFVGGLDSDVSDEDL+ +FSKFG+++SVKIPIGKGCGFVQFANRKN
Sbjct: 301 VQGSQSDSESNNTTIFVGGLDSDVSDEDLKLAFSKFGDVISVKIPIGKGCGFVQFANRKN 360

Query: 361 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSV 420
           AEDA+QGLNGTVIGKQTVRLSWGRSTGNKQWRGDS  NNQWNGGRYGGQ YGGYGGYYSV
Sbjct: 361 AEDALQGLNGTVIGKQTVRLSWGRSTGNKQWRGDS--NNQWNGGRYGGQSYGGYGGYYSV 420

Query: 421 PQHQDTNMQ----ATAAAVNGSS 439
           PQHQD N+     A AAAVNGSS
Sbjct: 421 PQHQDPNIHPTAAAAAAAVNGSS 439

[Close]

BLAST of Tan0021477 vs. ExPASy TrEMBL
Match: A0A6J1KYU5 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111499959 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 9.7e-221
Identity = 409/455 (89.89%), Postives = 421/455 (92.53%), Query Frame = 0


Query: 1   MAQPSNGADLNPQAPHPHHQWFQQQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHY 60
           MAQPSNGADLNPQAPHPHHQW+  QQQ+QYQQQWMA+QYPAAAMAMM QQQMMMYPPQHY
Sbjct: 1   MAQPSNGADLNPQAPHPHHQWY--QQQRQYQQQWMAVQYPAAAMAMMQQQQMMMYPPQHY 60

Query: 61  VAYSHHPYQQQQQ-QQQPP----QQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDET 120
           VAYSHHPYQQQQ  QQQPP    QQQQQQQ QSQRPRRQGSTD+VKTLWIGDLQ WMDET
Sbjct: 61  VAYSHHPYQQQQHPQQQPPPSQQQQQQQQQPQSQRPRRQGSTDDVKTLWIGDLQAWMDET 120

Query: 121 YLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFR 180
           YLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MPNT+LPFR
Sbjct: 121 YLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAMMPNTDLPFR 180

Query: 181 LNWATFSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRS 240
           LNWATFS +DRRPDTGSDLSIFVGDLAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRS
Sbjct: 181 LNWATFSGNDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSKYTSVKGAKVVIDSNSGRS 240

Query: 241 KGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHA 300
           KGYGFVRFGDENE+SRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGY+SQALVLAGGHA
Sbjct: 241 KGYGFVRFGDENEKSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYSSQALVLAGGHA 300

Query: 301 NGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFA 360
           NGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDL+Q FSKFGEIVSVKIPIGKGCGFVQFA
Sbjct: 301 NGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLKQPFSKFGEIVSVKIPIGKGCGFVQFA 360

Query: 361 NRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGY-GGYG 420
           NRKNAEDAIQGLNGTVIGKQ VRLSWGRSTG+KQWR DS  NNQWNGGRYG  GY GGYG
Sbjct: 361 NRKNAEDAIQGLNGTVIGKQIVRLSWGRSTGSKQWRSDS--NNQWNGGRYGVPGYGGGYG 420

Query: 421 GYYSVPQHQDTNMQAT-----------AAAVNGSS 439
           GYYSVPQ QD N QAT           AAAVNGSS
Sbjct: 421 GYYSVPQQQDANTQATVGAELMGHLAPAAAVNGSS 451

[Close]

BLAST of Tan0021477 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 503.1 bits (1294), Expect = 2.3e-142
Identity = 286/438 (65.30%), Postives = 330/438 (75.34%), Query Frame = 0


Query: 3   QPSNGADL----------NPQAPHPHHQWFQQQQQQQYQQQWM-AMQY-PAAAMAMMHQQ 62
           Q +NG+D           N Q P P  QW   QQQQQ QQQWM AMQY PAAAM MM QQ
Sbjct: 2   QTTNGSDSTLATSGATPPNQQTPPPPQQW---QQQQQQQQQWMAAMQYPPAAAMMMMQQQ 61

Query: 63  QMMMYPPQHYVAYSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQP 122
           QM+MYP Q YV Y+  PYQQ   Q       QQ Q Q  +   +GS D+VKTLW+GDL  
Sbjct: 62  QMLMYPHQ-YVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAIDRGSGDDVKTLWVGDLLH 121

Query: 123 WMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNT 182
           WMDETYLH+CF+HTGEV SVKVI NK T QSEGYGFVEF S A A++VLQNY+G++MPN+
Sbjct: 122 WMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNS 181

Query: 183 ELPFRLNWATFSASDRRP-DTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVID 242
           + PFR+NWA+FS  ++R  + G DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVID
Sbjct: 182 DQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVID 241

Query: 243 SNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALV 302
           SN+GRSKGYGFVRFGDENERSRA+TEMNG YCS+R MR+G+ATPK+A   QQ ++SQA++
Sbjct: 242 SNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVI 301

Query: 303 LAGGH-ANGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKG 362
           LAGGH +NG    G QSDGES N TIFVGG+D DV DEDLRQ FS+FGE+VSVKIP+GKG
Sbjct: 302 LAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKG 361

Query: 363 CGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQ 422
           CGFVQFA+RK+AEDAI+ LNGTVIGK TVRLSWGRS  NKQWRGDS    QWNGG   G 
Sbjct: 362 CGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDS--GQQWNGGYSRGH 421

Query: 423 GYGGYGGYYSVPQHQDTN 427
           GY   GGY     H D+N
Sbjct: 422 GYNNGGGY---ANHHDSN 429

[Close]

BLAST of Tan0021477 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 495.0 bits (1273), Expect = 6.3e-140
Identity = 289/435 (66.44%), Postives = 325/435 (74.71%), Query Frame = 0


Query: 10  LNPQAPHPHHQWFQQQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYVAYSHHP 69
           L    P P     QQQQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   
Sbjct: 27  LQQSTPPPQQ---QQQQQWQQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAA 86

Query: 70  YQQQQQQQQPPQQQQQQQ--AQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTG 129
           YQQ  Q Q    QQQQQQ     Q+PR     D+VKTLW+GDL  WMDETYLH CF+HT 
Sbjct: 87  YQQHPQFQYAAYQQQQQQHHQSQQQPRGGSGGDDVKTLWVGDLLHWMDETYLHTCFSHTN 146

Query: 130 EVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSASD 189
           EV SVKVI NKQT QSEGYGFVEF S + A++ LQ+++G  MPN E PFRLNWA+FS  +
Sbjct: 147 EVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGE 206

Query: 190 RR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFG 249
           +R  + G DLSIFVGDLA DV+DA+L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFG
Sbjct: 207 KRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFG 266

Query: 250 DENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAVQGPQ 309
           DENERSRAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQAL LAGGH       G  
Sbjct: 267 DENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG----NGSM 326

Query: 310 SDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDAI 369
           SDGESNN+TIFVGGLD+DV++EDL Q FS FGE+VSVKIP+GKGCGFVQFANR++AE+AI
Sbjct: 327 SDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAI 386

Query: 370 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVPQHQD 429
             LNGTVIGK TVRLSWGRS  NKQWR DS   NQWNGG   GQGY    GY     +QD
Sbjct: 387 GNLNGTVIGKNTVRLSWGRSP-NKQWRSDS--GNQWNGGYSRGQGYN--NGY----ANQD 445

Query: 430 TNMQAT-AAAVNGSS 439
           +NM AT AAAV G+S
Sbjct: 447 SNMYATAAAAVPGAS 445

[Close]

BLAST of Tan0021477 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 375.9 bits (964), Expect = 4.3e-104
Identity = 232/418 (55.50%), Postives = 275/418 (65.79%), Query Frame = 0


Query: 12  PQAPHPHHQWFQQQQQQQYQ-----QQWMAMQYPAAAMAMMHQQQMMMYPPQHYVAYSHH 71
           P  P PH     ++ Q +         W  M+YP   M      QMM  PP       +H
Sbjct: 25  PPYPPPHPPVEVEENQPKTSPTPPPPHW--MRYPPVLM-----PQMMYAPPPPMPFSPYH 84

Query: 72  PYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCF--AHT 131
            Y          +  + Q A            E KT+W+GDLQ WMDE YL++ F  A  
Sbjct: 85  QYPNHHHFHHQSRGNKHQNA---------FNGENKTIWVGDLQNWMDEAYLNSAFTSAEE 144

Query: 132 GEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWATFSAS 191
            E+ S+KVI NK  G SEGYGFVEF SH  ADKVLQ +NGA MPNT+ PFRLNWA+FS  
Sbjct: 145 REIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTG 204

Query: 192 DRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF 251
           ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRF
Sbjct: 205 EKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRF 264

Query: 252 GDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMAVQGP 311
           GDENER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+    A    
Sbjct: 265 GDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPSGAF--T 324

Query: 312 QSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKNAEDA 371
           +S+G++ NTTIFVGGLDS V+DEDL+Q FS+FGEIVSVKIP+GKGCGFVQF NR NAE+A
Sbjct: 325 RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEA 384

Query: 372 IQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSVPQ 422
           ++ LNGTVIGKQTVRLSWGR+  NKQ R      NQW    YGGQ Y GYG  Y VPQ
Sbjct: 385 LEKLNGTVIGKQTVRLSWGRNPANKQPR--DKYGNQWVDPYYGGQFYNGYG--YMVPQ 411

[Close]

BLAST of Tan0021477 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 369.0 bits (946), Expect = 5.2e-102
Identity = 227/422 (53.79%), Postives = 275/422 (65.17%), Query Frame = 0


Query: 9   DLNPQAPHPHHQWFQQQQQQQYQ------QQWMAMQYPAAAMAMMHQQQMMMYPPQHYVA 68
           D  P  P P  Q   ++++ Q +        W  M+YP   + + HQ   MMY P  +  
Sbjct: 20  DNQPPPPPPPPQQPAKEEENQPKTSPTPPPHW--MRYPPTVI-IPHQ---MMYAPPPFPP 79

Query: 69  YSHHPYQQQQQQQQPPQQQQQQQAQSQRPRRQGSTDEVKTLWIGDLQPWMDETYLHNCFA 128
           Y  +P       Q    + Q                E KT+W+GDL  WMDE YL++ FA
Sbjct: 80  YHQYPNHHHLHHQSRGNKHQ-----------NAFNGENKTIWVGDLHHWMDEAYLNSSFA 139

Query: 129 --HTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPNTELPFRLNWAT 188
                E+ SVKVI NK  G SEGYGFVEF SH  ADKVL+ +NG  MPNT+ PFRLNWA+
Sbjct: 140 SGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWAS 199

Query: 189 FSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYG 248
           FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYG
Sbjct: 200 FSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYG 259

Query: 249 FVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHANGMA 308
           FVRFGDENER++AMTEMNG+ CSSR MRIG ATP+K +GYQQ          GG+     
Sbjct: 260 FVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ---------QGGYMPNGT 319

Query: 309 VQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGEIVSVKIPIGKGCGFVQFANRKN 368
           +  P  +G+  NTTIFVGGLDS V+DEDL+Q F++FGEIVSVKIP+GKGCGFVQF NR N
Sbjct: 320 LTRP--EGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPN 379

Query: 369 AEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNNNQWNGGRYGGQGYGGYGGYYSV 422
           AE+A++ LNGTVIGKQTVRLSWGR+  NKQ R      NQW    YGGQ Y GYG  Y V
Sbjct: 380 AEEALEKLNGTVIGKQTVRLSWGRNPANKQPR--DKYGNQWVDPYYGGQFYNGYG--YMV 409

[Close]

BLAST of Tan0021477 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-92
Identity = 209/392 (53.32%), Postives = 251/392 (64.03%), Query Frame = 0


Query: 53  MMYPPQHYVAYSHHPYQQQQQQQQPPQQQQQQQAQ--------------SQRPRRQGSTD 112
           M  PP +       P  QQ       QQQQQQQ Q              SQ P   GS  
Sbjct: 1   MQQPPSNAAGAGQIPSGQQHLWMMMQQQQQQQQMQLSAAPLGQHQYGIGSQNP---GSAS 60

Query: 113 EVKTLWIGDLQPWMDETYLHNCFAHTGEVFSVKVICNKQTGQSEGYGFVEFYSHATADKV 172
           +VK+LWIGDLQ WMDE Y+ + FA +GE  S KVI NK TGQSEGYGF+EF SH+ A++V
Sbjct: 61  DVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERV 120

Query: 173 LQNYNGAIMPNTELPFRLNWATFSASDRRPDT-GSDLSIFVGDLAADVTDAMLQETFSSR 232
           LQ YNGA MP+TE  FRLNWA   A ++R  T G D +IFVGDLA +VTD ML +TF + 
Sbjct: 121 LQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNV 180

Query: 233 YTSVKGAKVVIDSNSGRSKGYGFVRFGDENERSRAMTEMNGIYCSSRPMRIGVATPKKAS 292
           Y SVKGAKVV+D  +GRSKGYGFVRF DENE+ RAMTEMNG YCS+RPMRIG A  K A 
Sbjct: 181 YGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNAL 240

Query: 293 GYQQGYASQALVLAGGHANGMAVQGPQSDGESNNTTIFVGGLDSDVSDEDLRQSFSKFGE 352
             Q           G +A          D + NNTTIFVGGLD++V+D++L+  F +FGE
Sbjct: 241 PMQPAMYQNT---QGANA---------GDNDPNNTTIFVGGLDANVTDDELKSIFGQFGE 300

Query: 353 IVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNN 412
           ++ VKIP GK CGFVQ+AN+ +AE A+  LNGT +G Q++RLSWGRS  NKQ     ++ 
Sbjct: 301 LLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQ-----SDQ 360

Query: 413 NQWNGGRYGG---QGYGGYGGYYSVPQHQDTN 427
            QWNGG Y G   Q  GGY GY + P  QD N
Sbjct: 361 AQWNGGGYYGYPPQPQGGY-GYAAQPPTQDPN 370

The following BLAST results are available for this feature:

BLAST of Tan0021477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB3	8.3e-145	65.53	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0WW84	3.3e-141	65.30	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	8.9e-139	66.44	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]
Q9SX80	6.0e-103	55.50	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9SX79	7.4e-101	53.79	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]

BLAST of Tan0021477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901011.1	5.8e-228	93.39	polyadenylate-binding protein RBP47 [Benincasa hispida]	[more]
XP_022986538.1	3.2e-226	93.38	polyadenylate-binding protein RBP47-like [Cucurbita maxima]	[more]
XP_004145357.2	4.6e-225	92.74	polyadenylate-binding protein RBP47 [Cucumis sativus] >KAE8651855.1 hypothetical...	[more]
XP_022943942.1	6.0e-225	93.15	polyadenylate-binding protein RBP47-like [Cucurbita moschata] >KAG6571157.1 Poly...	[more]
XP_022148600.1	1.7e-224	93.39	polyadenylate-binding protein RBP47 [Momordica charantia]	[more]

BLAST of Tan0021477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JGT7	1.5e-226	93.38	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FUF1	2.9e-225	93.15	polyadenylate-binding protein RBP47-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1D3C6	8.5e-225	93.39	polyadenylate-binding protein RBP47 OS=Momordica charantia OX=3673 GN=LOC1110172...	[more]
A0A1S3C9N4	7.2e-224	91.65	polyadenylate-binding protein RBP47 OS=Cucumis melo OX=3656 GN=LOC103498402 PE=4...	[more]
A0A6J1KYU5	9.7e-221	89.89	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Tan0021477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19130.1	2.3e-142	65.30	RNA-binding protein 47B	[more]
AT1G49600.1	6.3e-140	66.44	RNA-binding protein 47A	[more]
AT1G47500.1	4.3e-104	55.50	RNA-binding protein 47C'	[more]
AT1G47490.1	5.2e-102	53.79	RNA-binding protein 47C	[more]
AT5G54900.1	1.3e-92	53.32	RNA-binding protein 45A	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 102..175 e-value: 5.2E-14 score: 62.6 coord: 195..269 e-value: 4.5E-18 score: 76.0 coord: 313..380 e-value: 3.6E-24 score: 96.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 103..172 e-value: 3.6E-13 score: 49.1 coord: 314..377 e-value: 8.5E-20 score: 70.4 coord: 196..266 e-value: 3.1E-14 score: 52.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 101..181 score: 14.231764
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 194..273 score: 16.909462
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 312..384 score: 18.80261
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 193..270 e-value: 3.1E-21 score: 77.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 293..420 e-value: 3.9E-29 score: 103.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 59..192 e-value: 2.0E-28 score: 101.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..93
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 21..436
None	No IPR available	PANTHER	PTHR47640:SF9	POLYADENYLATE-BINDING PROTEIN RBP47B	coord: 21..436
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 193..272 e-value: 1.98983E-48 score: 158.211
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 102..182 e-value: 8.92694E-46 score: 151.261
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 311..382 e-value: 1.82737E-38 score: 131.657
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 177..285
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 64..184
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 303..414

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021477.1	Tan0021477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding