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Tan0021465 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGCTTTTCCGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCATCTTTCTTGATTATGGCTTTCTTCATCTGGGTCATCTTCTGCCACCACCGCCACCAAGTTTGTTGCCGCCACCGCCGCCAGACCCTTCCCGGAAAATGGAGAGGAAAGGCAAGTCGGCGGCGGTGGGGGAAGCGAGGAGAAGCTACTCCGGAAGTATTTCAATGGAAGGAGTTTCAATTCGAGAGGGTTTCAAGAGAACAAACGAACAGTCCCAAGCTGCCCCGATCCCCTCCACAACTAG ATGGTGGCTTTTCCGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCATCTTTCTTGATTATGGCTTTCTTCATCTGGGTCATCTTCTGCCACCACCGCCACCAAGAAAGGCAAGTCGGCGGCGGTGGGGGAAGCGAGGAGAAGCTACTCCGGAAGTATTTCAATGGAAGGAGTTTCAATTCGAGAGGGTTTCAAGAGAACAAACGAACAGTCCCAAGCTGCCCCGATCCCCTCCACAACTAG ATGGTGGCTTTTCCGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCATCTTTCTTGATTATGGCTTTCTTCATCTGGGTCATCTTCTGCCACCACCGCCACCAAGAAAGGCAAGTCGGCGGCGGTGGGGGAAGCGAGGAGAAGCTACTCCGGAAGTATTTCAATGGAAGGAGTTTCAATTCGAGAGGGTTTCAAGAGAACAAACGAACAGTCCCAAGCTGCCCCGATCCCCTCCACAACTAG MVAFPAMCGGATPTRRRRFLSSFLIMAFFIWVIFCHHRHQERQVGGGGGSEEKLLRKYFNGRSFNSRGFQENKRTVPSCPDPLHN Homology
BLAST of Tan0021465 vs. ExPASy Swiss-Prot
Match: Q9LUA1 (CLAVATA3/ESR (CLE)-related protein 27 OS=Arabidopsis thaliana OX=3702 GN=CLE27 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 9.6e-05 Identity = 29/80 (36.25%), Postives = 38/80 (47.50%), Query Frame = 0
BLAST of Tan0021465 vs. NCBI nr
Match: KAG6579278.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.7 bits (343), Expect = 9.1e-29 Identity = 67/101 (66.34%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of Tan0021465 vs. NCBI nr
Match: KAG7016789.1 (hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26 Identity = 63/92 (68.48%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Tan0021465 vs. NCBI nr
Match: KAG6601785.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032500.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 120.2 bits (300), Expect = 8.8e-24 Identity = 58/92 (63.04%), Postives = 66/92 (71.74%), Query Frame = 0
BLAST of Tan0021465 vs. NCBI nr
Match: KAA0063931.1 (putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]) HSP 1 Score: 87.0 bits (214), Expect = 8.3e-14 Identity = 47/85 (55.29%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Tan0021465 vs. NCBI nr
Match: XP_040996054.1 (CLAVATA3/ESR (CLE)-related protein 27 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05 Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Tan0021465 vs. ExPASy TrEMBL
Match: A0A5A7VDX3 (Putative Clavata3/esr-related 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00690 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.0e-14 Identity = 47/85 (55.29%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Tan0021465 vs. ExPASy TrEMBL
Match: A0A6A1W705 (CLAVATA3/ESR (CLE)-related protein 43 OS=Morella rubra OX=262757 GN=CJ030_MR3G018956 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of Tan0021465 vs. ExPASy TrEMBL
Match: A0A2C9VNI0 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G068400 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of Tan0021465 vs. ExPASy TrEMBL
Match: A0A2I4HTU3 (CLAVATA3/ESR (CLE)-related protein 27 OS=Juglans regia OX=51240 GN=LOC109021401 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of Tan0021465 vs. ExPASy TrEMBL
Match: A0A2C9UKL3 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G102600 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.9e-05 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
BLAST of Tan0021465 vs. TAIR 10
Match: AT3G25905.1 (CLAVATA3/ESR-RELATED 27 ) HSP 1 Score: 47.4 bits (111), Expect = 6.8e-06 Identity = 29/80 (36.25%), Postives = 38/80 (47.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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