Tan0021429 (gene) Snake gourd v1

Overview
NameTan0021429
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
LocationLG08: 38491401 .. 38492693 (-)
RNA-Seq ExpressionTan0021429
SyntenyTan0021429
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGACTAACCGTGTGGGTACTCAAGATGATCCGATAGAGGATTGGAGTAAGCTCAACCTTACCATTGAAGAAGAGGAAGTTTCAGTGGATGTAAAGTTTGTTTCAAAGTTCACTGAAGAGGATCAACTAGGAGGTTTTTTTAGTGGGCAAACTTATCTCTGGGTGGATTCTTTTAGGGGAGGTGATTAGGAACACTTTCAAAGCAGCTTGGAAGATCGAGACAGGACTGGAAGTTGAGGTCATTGGCAGAAACCTTTTCTCTTTTTGGTTTAGAGAGGTGTTAGACTGTACAAGAGTTTTTCATAGGGGTCTATGGTTGTTCGATAGATTTCTATTAGCTCTTGAGAAACCAAATCTGTATTCCAAACCATCAGATCTAGTGTTCGAACATGTTGCTTTTTGGGTCCGTTTTTTGGACATTCCTTTGGCGTGTTTCAATAAAGAGATGGCACAGAGGCTGGGCAATGTTATGGGAGTTTTTGAGGATTTCGACGAGGGAGACAGGCAATTAAGCTGGGGCAGAAGTATGCAGATTAAAATCAGGATCAATATTTTGAAACCACTGATAAGAAGAATCAAGCTAAACATGAAGGACCCTATGAGTGGAGTGATGATAACTATCAAATATGAAAAATTACATGAATTCTGCTCACATTGTGGGGTAATTGGTCATCACTTAAAGATTGTAATTTGTTCTACAAGAATGCGACCCAATCCTCAAGATTCCATCAGTATGACCAGCAACTGAGATTCACTGGACGCTCTCAACCAATTGCGAAATCCCCTAGTTATGCCAATTCGTGGAAGGGTCATGGGCCTGATGGTCGGGTTTCTACCACTCAAGGAACTCTGATGGTTACATCTCTTTCGCAGTTTCCCAAGACAGACAGAGGGATTCACCTTGTTCCGACTATTGGGGTCAGAGCGAATAGCTCGCCGGTGACTACTCTGAAGACCATTAATTCCCTAATGGGCGTGTCCCTTGTATTGAAGTCCAGAGAGATTTTAGGAGCGACTGAAAGGGGAGAGATGAAACGACAGGATGTTAATTGTACGAGAAAATTGATTTTAGGGATGCTCGCTGGTACGAAAGGGTTAGGGGCGACAGTGGATTTGGATGGTGGGTCGATTGTTCATGGGCCTTCTACTAAGTGTTCAGTGCTCAACCAACTCCCCTCAATTGGATCAAATCTACCAACCAATGATGTTCAGGCAATCGACCCATCAAAACCCCACAAGCCGAATTCCAAGGGGGCAGTTCTTCATAGGGTATGGCCCAATTTGTGA

mRNA sequence

ATGGAGTCGACTAACCGTGTGGGTACTCAAGATGATCCGATAGAGGATTGGAGTAAGCTCAACCTTACCATTGAAGAAGAGGAAGTTTCAGTGGATGTAAAGTTTGTTTCAAAGTTCACTGAAGAGGATCAACTAGGAGGACTGGAAGTTGAGGTCATTGGCAGAAACCTTTTCTCTTTTTGGTTTAGAGAGGTGTTAGACTGTACAAGAGTTTTTCATAGGGGTCTATGGTTGTTCGATAGATTTCTATTAGCTCTTGAGAAACCAAATCTGTATTCCAAACCATCAGATCTAGTGTTCGAACATGTTGCTTTTTGGGTCCGTTTTTTGGACATTCCTTTGGCGTGTTTCAATAAAGAGATGGCACAGAGGCTGGGCAATGTTATGGGAGTTTTTGAGGATTTCGACGAGGGAGACAGGCAATTAAGCTGGGGCAGAAATTGTAATTTGTTCTACAAGAATGCGACCCAATCCTCAAGATTCCATCAGTATGACCAGCAACTGAGATTCACTGGACGCTCTCAACCAATTGCGAAATCCCCTAGTTATGCCAATTCGTGGAAGGGTCATGGGCCTGATGGTCGGGTTTCTACCACTCAAGGAACTCTGATGGTTACATCTCTTTCGCAGTTTCCCAAGACAGACAGAGGGATTCACCTTGTTCCGACTATTGGGGTCAGAGCGAATAGCTCGCCGGTGACTACTCTGAAGACCATTAATTCCCTAATGGGCGTGTCCCTTGTATTGAAGTCCAGAGAGATTTTAGGAGCGACTGAAAGGGGAGAGATGAAACGACAGGATGTTAATTGTACGAGAAAATTGATTTTAGGGATGCTCGCTGGTACGAAAGGGTTAGGGGCGACAGTGGATTTGGATGGTGGGTCGATTGTTCATGGGCCTTCTACTAAGTGTTCAGTGCTCAACCAACTCCCCTCAATTGGATCAAATCTACCAACCAATGATGTTCAGGCAATCGACCCATCAAAACCCCACAAGCCGAATTCCAAGGGGGCAGTTCTTCATAGGGTATGGCCCAATTTGTGA

Coding sequence (CDS)

ATGGAGTCGACTAACCGTGTGGGTACTCAAGATGATCCGATAGAGGATTGGAGTAAGCTCAACCTTACCATTGAAGAAGAGGAAGTTTCAGTGGATGTAAAGTTTGTTTCAAAGTTCACTGAAGAGGATCAACTAGGAGGACTGGAAGTTGAGGTCATTGGCAGAAACCTTTTCTCTTTTTGGTTTAGAGAGGTGTTAGACTGTACAAGAGTTTTTCATAGGGGTCTATGGTTGTTCGATAGATTTCTATTAGCTCTTGAGAAACCAAATCTGTATTCCAAACCATCAGATCTAGTGTTCGAACATGTTGCTTTTTGGGTCCGTTTTTTGGACATTCCTTTGGCGTGTTTCAATAAAGAGATGGCACAGAGGCTGGGCAATGTTATGGGAGTTTTTGAGGATTTCGACGAGGGAGACAGGCAATTAAGCTGGGGCAGAAATTGTAATTTGTTCTACAAGAATGCGACCCAATCCTCAAGATTCCATCAGTATGACCAGCAACTGAGATTCACTGGACGCTCTCAACCAATTGCGAAATCCCCTAGTTATGCCAATTCGTGGAAGGGTCATGGGCCTGATGGTCGGGTTTCTACCACTCAAGGAACTCTGATGGTTACATCTCTTTCGCAGTTTCCCAAGACAGACAGAGGGATTCACCTTGTTCCGACTATTGGGGTCAGAGCGAATAGCTCGCCGGTGACTACTCTGAAGACCATTAATTCCCTAATGGGCGTGTCCCTTGTATTGAAGTCCAGAGAGATTTTAGGAGCGACTGAAAGGGGAGAGATGAAACGACAGGATGTTAATTGTACGAGAAAATTGATTTTAGGGATGCTCGCTGGTACGAAAGGGTTAGGGGCGACAGTGGATTTGGATGGTGGGTCGATTGTTCATGGGCCTTCTACTAAGTGTTCAGTGCTCAACCAACTCCCCTCAATTGGATCAAATCTACCAACCAATGATGTTCAGGCAATCGACCCATCAAAACCCCACAAGCCGAATTCCAAGGGGGCAGTTCTTCATAGGGTATGGCCCAATTTGTGA

Protein sequence

MESTNRVGTQDDPIEDWSKLNLTIEEEEVSVDVKFVSKFTEEDQLGGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHVAFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGRNCNLFYKNATQSSRFHQYDQQLRFTGRSQPIAKSPSYANSWKGHGPDGRVSTTQGTLMVTSLSQFPKTDRGIHLVPTIGVRANSSPVTTLKTINSLMGVSLVLKSREILGATERGEMKRQDVNCTRKLILGMLAGTKGLGATVDLDGGSIVHGPSTKCSVLNQLPSIGSNLPTNDVQAIDPSKPHKPNSKGAVLHRVWPNL
Homology
BLAST of Tan0021429 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 103.6 bits (257), Expect = 3.5e-18
Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0

Query: 12  DPIEDWSKLNLTIEEEEVSVDVKFVSKFTEEDQL-------------------------- 71
           D +E+W    LT EEEE ++DV   +  T   +L                          
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 72  -----GGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVF 131
                   EV+ +G NLF F F   LD  +++  G W FDR L+ + KP     PS+L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 132 EHVAFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGRN 148
             +  WVRF D+PL C  ++MA RLGN +G FE+ D  D    WG N
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSN 171

BLAST of Tan0021429 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-17
Identity = 52/163 (31.90%), Postives = 75/163 (46.01%), Query Frame = 0

Query: 14  IEDWSKLNLTIEEEEVSVDV-------------------------------KFVSKFTEE 73
           +E+W    LT EE++++VD+                               K   K   +
Sbjct: 7   LEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAWK 66

Query: 74  DQLGGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEH 133
                  V++IG N+F F F    D  R+   G W FDR L+ ++ P   +KP D+ F +
Sbjct: 67  LDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRN 126

Query: 134 VAFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWG 146
           V+ WV F D+ LAC NK MA RLGN +G+FED +       WG
Sbjct: 127 VSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWG 169

BLAST of Tan0021429 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 5.1e-17
Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0

Query: 14  IEDWSKLNLTIEEEEVSVDVK-------------------FVSKFTEEDQLG-------- 73
           + DW K  LT EE+E+++DV                       +    D L         
Sbjct: 7   LADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWK 66

Query: 74  ---GLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHV 133
               L VE IG+NLF F F    D  RV   G W FD+ L+ L+KP      S+L F  V
Sbjct: 67  VEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRV 126

Query: 134 AFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGRNCNL 151
           AFW+   D+P++  NK MA RLGN +G F D D  ++  SWG +  +
Sbjct: 127 AFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRI 173

BLAST of Tan0021429 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-14
Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 47  GLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHVAFW 106
           G++V VIG NLF F F  V+D  RV   G W FD+ LL L + +   +PSD+    V FW
Sbjct: 68  GMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLTGVQFW 127

Query: 107 VRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGRNCNL 151
           V   ++PL   NK++ Q +GN +G F D D  D  ++WGR   +
Sbjct: 128 VHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRI 171

BLAST of Tan0021429 vs. NCBI nr
Match: TXG61207.1 (hypothetical protein EZV62_012570 [Acer yangbiense])

HSP 1 Score: 89.0 bits (219), Expect = 8.9e-14
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 46  GGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHVAF 105
           G +E+EV+G N+F F+F  + D  R++ RG W FDR L+ LEKP      S L F+ V F
Sbjct: 68  GNVEIEVVGENIFMFYFNNLEDRNRIWQRGPWHFDRSLIVLEKPEGTGNISQLSFDKVEF 127

Query: 106 WVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGR 147
           WV+  DIP+ C N+  A+ L   +G F +     R+  WG+
Sbjct: 128 WVQIHDIPIMCMNRRTAKWLAEQIGKFIEIPMESRE-CWGK 167

BLAST of Tan0021429 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-18
Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0

Query: 12  DPIEDWSKLNLTIEEEEVSVDVKFVSKFTEEDQL-------------------------- 71
           D +E+W    LT EEEE ++DV   +  T   +L                          
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 72  -----GGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVF 131
                   EV+ +G NLF F F   LD  +++  G W FDR L+ + KP     PS+L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 132 EHVAFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGRN 148
             +  WVRF D+PL C  ++MA RLGN +G FE+ D  D    WG N
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSN 171

BLAST of Tan0021429 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17
Identity = 52/163 (31.90%), Postives = 75/163 (46.01%), Query Frame = 0

Query: 14  IEDWSKLNLTIEEEEVSVDV-------------------------------KFVSKFTEE 73
           +E+W    LT EE++++VD+                               K   K   +
Sbjct: 7   LEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAWK 66

Query: 74  DQLGGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEH 133
                  V++IG N+F F F    D  R+   G W FDR L+ ++ P   +KP D+ F +
Sbjct: 67  LDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRN 126

Query: 134 VAFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWG 146
           V+ WV F D+ LAC NK MA RLGN +G+FED +       WG
Sbjct: 127 VSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWG 169

BLAST of Tan0021429 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-17
Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0

Query: 14  IEDWSKLNLTIEEEEVSVDVK-------------------FVSKFTEEDQLG-------- 73
           + DW K  LT EE+E+++DV                       +    D L         
Sbjct: 7   LADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWK 66

Query: 74  ---GLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHV 133
               L VE IG+NLF F F    D  RV   G W FD+ L+ L+KP      S+L F  V
Sbjct: 67  VEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRV 126

Query: 134 AFWVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGRNCNL 151
           AFW+   D+P++  NK MA RLGN +G F D D  ++  SWG +  +
Sbjct: 127 AFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRI 173

BLAST of Tan0021429 vs. ExPASy TrEMBL
Match: A0A5C7HVP8 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012570 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-14
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 46  GGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHVAF 105
           G +E+EV+G N+F F+F  + D  R++ RG W FDR L+ LEKP      S L F+ V F
Sbjct: 68  GNVEIEVVGENIFMFYFNNLEDRNRIWQRGPWHFDRSLIVLEKPEGTGNISQLSFDKVEF 127

Query: 106 WVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGR 147
           WV+  DIP+ C N+  A+ L   +G F +     R+  WG+
Sbjct: 128 WVQIHDIPIMCMNRRTAKWLAEQIGKFIEIPMESRE-CWGK 167

BLAST of Tan0021429 vs. ExPASy TrEMBL
Match: A0A5C7HJF0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_017649 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.1e-13
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0

Query: 46  GGLEVEVIGRNLFSFWFREVLDCTRVFHRGLWLFDRFLLALEKPNLYSKPSDLVFEHVAF 105
           G +++EV+G N+F F+F   +D  R+++RG W FDR L+ LEKP      S   F    F
Sbjct: 68  GTVDIEVVGENIFMFYFNNPIDQDRIWNRGPWHFDRSLIVLEKPEGTGHISQFSFSRAKF 127

Query: 106 WVRFLDIPLACFNKEMAQRLGNVMGVFEDFDEGDRQLSWGR 147
           WV+  DIP+ C N+ MA+ L   +G   D     R   WG+
Sbjct: 128 WVQIHDIPIICMNRRMARWLAEQIGEVIDIPTESRD-CWGK 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022158377.13.5e-1834.13uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_022132681.13.0e-1731.90uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022156185.15.1e-1734.13uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_028124075.14.0e-1441.35uncharacterized protein LOC114321128 [Camellia sinensis][more]
TXG61207.18.9e-1440.59hypothetical protein EZV62_012570 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
A0A6J1DX301.7e-1834.13uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1BSZ11.4e-1731.90uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DU552.4e-1734.13uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5C7HVP84.3e-1440.59Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012570 PE=4 SV=1[more]
A0A5C7HJF08.1e-1338.61Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_017649 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 44..144
e-value: 2.0E-13
score: 50.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0021429.1Tan0021429.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity