Tan0021425 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAAGATTTGGAACCTAGATGCCCCAACCTCTTTTGATCGTGCTGGTAAAGGTATATTTATATGCACTTTCTCGACAAAAAAGGACAAAATGCAAGTGGTTAGATGAGGCCCATGGATTTTCGACAAAGCCTTGGTGGTGCTCGAAGAACTGAAAGGTACAAGTAAGATCACCGAACTGGACTTCAGGTATGCATCTTTCTGGCTTCATTTCCATAATTTACCCATTGTAGGAATCTCTAGGAAAACTACAGTGGCTCATGGAAACGAGGTAGGTCAGTTTGAGGGAGTGGATTTAGATGACGAAAGATGTAGGGGAGGCAAATCGCTAAGGGTGAGAGTGAAAATTGATATTCAAAAGCCTCTAAAGCGTGTTGTGAGGTTCAAAATTGGTTCAATGATAGAGGAGGCCTGGGCTCCCATAACCTATGAAAAACTTCCTGATTTGTGCTTTTGTTGCGGGATTTTAGGGCATGGAGCCCAAGAGTGTGAGGAAAGAGGATCGGATCAAGCTGCTGAAATGCCTTTTGGGAGCTGGTTACGCGAAAGTTCAAACTGGAAAGGAAAAAAACATAATAGAGGAGTCGAAGAGTTGAAAGATCAACTGGAAAGGACCTCGGTAAGATCTGAAATAGTGGGTAGGGACGGGGTAGAGGACGATTTGGGGCGGGAAGTCAACGAGAGAAGGAGACTGGGCAGGCTCAGATTGACGACCAGAGTTTAAGCGGCCAACCAGAAAAGAAAAAGGAAAACATTTTTGGTCGGCGGGTTCAATCGAAAACGGGAGGGGTTATTCTCAAGACAAAAGCTGACAATTGTGGCAACGTTTCTTCAGAGGTGGGGCCCACAAATTTGGATGCTAATTCACATCACCGTTCAACTGTAAAAGACACCTCTTTAGAGAACTTCCATCATTTGGGCCCTTCCGAGGAAAGTGGAGTCCAGCAGCCCACCAACTCTCCTTTATTTTCTAACCCAGATTTGGTAGGTGTTGGTGGGCCTGGACATAAGCCACCCATTTTGGGTCCAGATCCAAACCAACCTAAAAGCAAGCCTGGTTCTTTTAAACAACTAAATCCTTATACAGAGTTGTTCTCCCCAATACAAGCTACGAAACTTCAACCTGGCCACGAGGAAGTTTTGGCTTCAAAAAGTTGGACCACACAAACTCAAACCATTACTATTTTCGATCAAAAAGCCGACAAGGCAAACCCAAGCAATAAGGTCGAAAAGCAAATGCTACCAAGGAAGAAATGGAAACGAATGGCCCGTGTCGAAAAAGGATATGAAGTGAGTAGTTGCAGATCCCCAATTAAGGCAGGCTCCAAACATATTCTGGACTCTGGCTTTAATTCAATTGCCCACAAGAGACTGTATTCTCAAGACTCGACTTCACAAAATGAGATATCGGCGGAGGCTGGTCAACAGCCCCGTCGGACGCTATGAAAATATTGTGCTGGAACGTTAGAGGGTTGGGGAGCCCTCGAACGTTTCGTGATCTCCGCTACGAGGTTTGTAGCAAGTCCCCACAGCTTGTGTTCATTTCTGAATCTAAATGTGATTATAGCAAGGTTGAAAGTCTTAAAGTGCTTCTGAATTTTGATAAGGATTTTTGTGTGCCAAGTGAGGGAAGGAAAGGTGGTTTGATTCTATTTTGGAACGACATTTCTCATGTAACTATTTCCTCCTCTCCGGTTGGCCACGTTGATGCTACATTTCTTTGCCAGAATAAAAGGTGGAGATTTACGGGGTTTTATGGAAACCCTTTTAGAGAGAAACAGATCGATTCCTGGAAGTTGCTTGAGCGTTTGAGTGAGACTAATGATTTGCCTTGGGTGATGGGTGGAGACTTTAATGAAATTCTTTATAACAACGAAAAGGAGGGAGGCGCCACCCAGAATGCTAGACAAATAAAGGACTTCAAGGATACGATAAATTATTGCAACCTCATTGACCAGGGCTTCAGGGGAAGCTGTTTTACTTGGTTTAAAAATAGGAACAACAAAAATAGTATTCGGGAAAGATTGGAAAGGTTTTTTATAACCCCTTCTGTGAGAGATGATGTCAAAATGGTCTCGGTTGATCATCTGAACTTTCACAAGTCTAACCATAGACCCATCATGCTGACCCTTTACTTTTGGACTCGGCATAGGCAGGGGCGCAAGAACGGAAGAATCACAAAGTTTGAGGAGAGTTGGATCCAACATGAGGAATGTGGTAGCATTATATAAAGATCATTGGGCGAATCATTGGGGGAGAAACGTTGGAAACTACGACACCAAGATTAGCAGTTGTATTGATTCCCTCAACTCTTGGAACAAGAAAAGACTTGAAGGGAATCTTAAGGCAACCATACATAGAAAAGAAGATGAAAGTAAGACTTTGCTTGCCTCCAATGGAAATGTCGATACTGACCAAGTAAGAGTGGCTGAAAGGGATCTTAATGTTCTTCTTGAGGAGGAGGATTTTATTGGAGAACGAGATCGAGAGATGTGTGGCTTAGTTGTGGCGACAAAAACACGAAATGGTTTCACTCGAAAGCGTCGCATCGAAAGAAAAGAAATCACTTGAGTGGAGTCTTTGATAAACAAGGGAGATGGGTGGAAGGGGAAGAGGAAATTGGCATCGTTGCTCAGAATTACTTCCAAAAGCTCTGTTCCAAGCGGGGAGGCGGTCACAAGAGTGCTGGAAGGTGTCCAAAAGTCAATATCTGAGTCTATGAATAGAATTTTGCTGGAAAAATTTACTAGAAGTGAGATTGAAGGAGCTCTCAAGGCTATGCATCCCCTAAAAGCCCCAGGTCCTGATGGGGCTCATGCTCTTTTCTTTAAACACTAGTCGAAGGATGTTGGCCAGGAAACCGTGGAAATTTGCTTGAAAGTTCTTAATGACAGGGAGAACGTTAGGCCTCTGAATAAAACTCTGATTGCTCTAATCCCTAAAGATCAAAAGCCTACCCAGATGCAGGATTTTCGCCCTATCAGTCTCTGTAATGTCATCTACAAGATCATCGCTAAGGTTCTGGCAAATAGACTTAGAAACGTTTTGGACACGGTCATTTCTCCAACACAAGCAGCTTTTGTCCCTGACAGACAAATCTCTGACAATGTGA ATGCCGAAGATTTGGAACCTAGATGCCCCAACCTCTTTTGATCGTGCTGGTAAAGGAATCTCTAGGAAAACTACAGTGGCTCATGGAAACGAGGTAGGTCAGTTTGAGGGAGTGGATTTAGATGACGAAAGATGTAGGGGAGGCAAATCGCTAAGGGTGAGAGTGAAAATTGATATTCAAAAGCCTCTAAAGCGTGTTGTGAGGTTCAAAATTGGTTCAATGATAGAGGAGGCCTGGGCTCCCATAACCTATGAAAAACTTCCTGATTTGTGCTTTTGTTGCGGGATTTTAGGGCATGGAGCCCAAGAGTGTGAGGAAAGAGGATCGGATCAAGCTGCTGAAATAGGACGATTTGGGGCGGGAAGTCAACGAGAGAAGGAGACTGGGCAGGCTCAGATTGACGACCAGAGTTTAAGCGGCCAACCAGAAAAGAAAAAGGAAAACATTTTTGGTCGGCGGGTTCAATCGAAAACGGGAGGGGTTATTCTCAAGACAAAAGCTGACAATTTCCAGCAGCCCACCAACTCTCCTTTATTTTCTAACCCAGATTTGGTAGGTACTAATGATTTGCCTTGGGTGATGGGTGGAGACTTTAATGAAATTCTTTATAACAACGAAAAGGAGGGAGGCGCCACCCAGAATGCTAGACAAATAAAGGACTTCAAGGATACGATAAATTATTGCAACCTCATTGACCAGGGCTTCAGGGGAAGCTGTTTTACTTGGTTTAAAAATAGGAACAACAAAAATATCTCTGTAATGTCATCTACAAGATCATCGCTAAGGTTCTGGCAAATAGACTTAGAAACGTTTTGGACACGGTCATTTCTCCAACACAAGCAGCTTTTGTCCCTGACAGACAAATCTCTGACAATGTGA ATGCCGAAGATTTGGAACCTAGATGCCCCAACCTCTTTTGATCGTGCTGGTAAAGGAATCTCTAGGAAAACTACAGTGGCTCATGGAAACGAGGTAGGTCAGTTTGAGGGAGTGGATTTAGATGACGAAAGATGTAGGGGAGGCAAATCGCTAAGGGTGAGAGTGAAAATTGATATTCAAAAGCCTCTAAAGCGTGTTGTGAGGTTCAAAATTGGTTCAATGATAGAGGAGGCCTGGGCTCCCATAACCTATGAAAAACTTCCTGATTTGTGCTTTTGTTGCGGGATTTTAGGGCATGGAGCCCAAGAGTGTGAGGAAAGAGGATCGGATCAAGCTGCTGAAATAGGACGATTTGGGGCGGGAAGTCAACGAGAGAAGGAGACTGGGCAGGCTCAGATTGACGACCAGAGTTTAAGCGGCCAACCAGAAAAGAAAAAGGAAAACATTTTTGGTCGGCGGGTTCAATCGAAAACGGGAGGGGTTATTCTCAAGACAAAAGCTGACAATTTCCAGCAGCCCACCAACTCTCCTTTATTTTCTAACCCAGATTTGGTAGGTACTAATGATTTGCCTTGGGTGATGGGTGGAGACTTTAATGAAATTCTTTATAACAACGAAAAGGAGGGAGGCGCCACCCAGAATGCTAGACAAATAAAGGACTTCAAGGATACGATAAATTATTGCAACCTCATTGACCAGGGCTTCAGGGGAAGCTGTTTTACTTGGTTTAAAAATAGGAACAACAAAAATATCTCTGTAATGTCATCTACAAGATCATCGCTAAGGTTCTGGCAAATAGACTTAGAAACGTTTTGGACACGGTCATTTCTCCAACACAAGCAGCTTTTGTCCCTGACAGACAAATCTCTGACAATGTGA MPKIWNLDAPTSFDRAGKGISRKTTVAHGNEVGQFEGVDLDDERCRGGKSLRVRVKIDIQKPLKRVVRFKIGSMIEEAWAPITYEKLPDLCFCCGILGHGAQECEERGSDQAAEIGRFGAGSQREKETGQAQIDDQSLSGQPEKKKENIFGRRVQSKTGGVILKTKADNFQQPTNSPLFSNPDLVGTNDLPWVMGGDFNEILYNNEKEGGATQNARQIKDFKDTINYCNLIDQGFRGSCFTWFKNRNNKNISVMSSTRSSLRFWQIDLETFWTRSFLQHKQLLSLTDKSLTM Homology
BLAST of Tan0021425 vs. NCBI nr
Match: PPR85699.1 (hypothetical protein GOBAR_AA34985 [Gossypium barbadense]) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-17 Identity = 67/240 (27.92%), Postives = 113/240 (47.08%), Query Frame = 0
BLAST of Tan0021425 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 97.1 bits (240), Expect = 2.8e-16 Identity = 81/301 (26.91%), Postives = 128/301 (42.52%), Query Frame = 0
BLAST of Tan0021425 vs. NCBI nr
Match: PPD84469.1 (hypothetical protein GOBAR_DD18598 [Gossypium barbadense]) HSP 1 Score: 92.4 bits (228), Expect = 6.8e-15 Identity = 69/257 (26.85%), Postives = 115/257 (44.75%), Query Frame = 0
BLAST of Tan0021425 vs. NCBI nr
Match: XP_027118730.1 (uncharacterized protein LOC113735973 [Coffea arabica]) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-14 Identity = 69/243 (28.40%), Postives = 105/243 (43.21%), Query Frame = 0
BLAST of Tan0021425 vs. NCBI nr
Match: PPD94756.1 (hypothetical protein GOBAR_DD08216 [Gossypium barbadense]) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-14 Identity = 73/242 (30.17%), Postives = 110/242 (45.45%), Query Frame = 0
BLAST of Tan0021425 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-20 Identity = 80/284 (28.17%), Postives = 122/284 (42.96%), Query Frame = 0
BLAST of Tan0021425 vs. ExPASy TrEMBL
Match: A0A2P5W3R4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA34985 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.1e-18 Identity = 67/240 (27.92%), Postives = 113/240 (47.08%), Query Frame = 0
BLAST of Tan0021425 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-16 Identity = 81/301 (26.91%), Postives = 128/301 (42.52%), Query Frame = 0
BLAST of Tan0021425 vs. ExPASy TrEMBL
Match: A0A2N9FNT0 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15 Identity = 77/280 (27.50%), Postives = 119/280 (42.50%), Query Frame = 0
BLAST of Tan0021425 vs. ExPASy TrEMBL
Match: A0A2N9HDU2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38224 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.9e-15 Identity = 85/328 (25.91%), Postives = 138/328 (42.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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