Tan0021374 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTAATTTTGAAAGAAATTGTTAAAACCCTAAAAGCCGCCTCTTATTCCTCCCCTCCATCTTCACGCTTTCTCCTCTTCCTCTTCCTCTTTGCACCTTCCCGCCGCTGCCGTCTCCGTCGCTCTCGGTGTCGCCGTCGCACCCCTTCTTCCCTGACTTTTCTACTCTTTCTTGGTCTCAGGTATTCTCTCTATTTCCTATCTTTCTCTTTTAAGCTTCACTCCTTACAGTGTGTGAGACCCCATGGGAACTGATTTGATTTAGTTTTGCCTAATTTTCATTCGTTTGGTTGCTCATTCGTACAATTCGAGACCATTGCATTCTATTGTTGTGTTGGTCAAATTTGAAATTGGATTATAGTATTTTAGAACCCGGTGTTGTTTTTCGTTCAATCTTTCTCCTTTATTATTAGTTAATAGTTATATTGGATTATAGTAGTTTAGAATCAATCCATTTTTTACCTGAGGGCTTTTTGTTTCTTTAACAAAATTTTCCCAGGAGGCAGCTGTTGAAGTTTATTAAGATTATATATGCCTTCAATTATGCTGCCTATCTTGTTGATGGGTTTATATATTCTTTGCTTTGTTTAACTGTAGTTTTTTGGGTGTTTACAGTGTTGAAACTCGGAACAATTCTATAATGCAGTCGATGGAAGCCTCCACTTCCATGGAAGTGGAAACAGTTTCAACACAAACGAAAGATGTAGTTAGCACATTGCCAACAAAACCACAATTTGATCCTCTAAAGCCTCATGAGATGAACGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAGCAGATGAAAATTGACATCCGAATGAATCTCAAGGCACGGAAAGTTGAATTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCATGCCTTCATGCTCGGTTTCGATGTGATCGATGCCATTGCCCTCTTACGGGTGGATGAACTCTATGTGGAATCTTTTGAGATTAAAGATGTTAAAACATTGCGAGGCGAGCACTTGTCCCGTGCCATAGGAAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAATGCCACGAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCTAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTTATTTTAGGGTCCCCTGCAGGTAAAGTTTATTCAAAACTGAGAGCAGTGACAGCCAGATTGGCAGAAAGGTTTTGATCTTTCATGACTATTGTACTTTTTATGAGCTTCTCTTGATTAATGATTTTTGCGCATTGGTTATTTGAGGAAGAGTGTATAACTATGTCCAAAAGCTTGTGCATTGAAGTTTTGTTCGAGATACTGATTACTAATCAATCTATATTCAGAAAATGGGCATCAAGTGATTGGCATTTGTTGGTGTCGTTTTTGCTTGTCGATGGAGGTTTGTATGTTATAGTTGTGTCCATTGATTGAAGTAACATTGATATCCATTTGGG CTTAATTTTGAAAGAAATTGTTAAAACCCTAAAAGCCGCCTCTTATTCCTCCCCTCCATCTTCACGCTTTCTCCTCTTCCTCTTCCTCTTTGCACCTTCCCGCCGCTGCCGTCTCCGTCGCTCTCGGTGTCGCCGTCGCACCCCTTCTTCCCTGACTTTTCTACTCTTTCTTGGTCTCAGTGTTGAAACTCGGAACAATTCTATAATGCAGTCGATGGAAGCCTCCACTTCCATGGAAGTGGAAACAGTTTCAACACAAACGAAAGATGTAGTTAGCACATTGCCAACAAAACCACAATTTGATCCTCTAAAGCCTCATGAGATGAACGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAGCAGATGAAAATTGACATCCGAATGAATCTCAAGGCACGGAAAGTTGAATTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCATGCCTTCATGCTCGGTTTCGATGTGATCGATGCCATTGCCCTCTTACGGGTGGATGAACTCTATGTGGAATCTTTTGAGATTAAAGATGTTAAAACATTGCGAGGCGAGCACTTGTCCCGTGCCATAGGAAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAATGCCACGAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCTAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTTATTTTAGGGTCCCCTGCAGGTAAAGTTTATTCAAAACTGAGAGCAGTGACAGCCAGATTGGCAGAAAGGTTTTGATCTTTCATGACTATTGTACTTTTTATGAGCTTCTCTTGATTAATGATTTTTGCGCATTGGTTATTTGAGGAAGAGTGTATAACTATGTCCAAAAGCTTGTGCATTGAAGTTTTGTTCGAGATACTGATTACTAATCAATCTATATTCAGAAAATGGGCATCAAGTGATTGGCATTTGTTGGTGTCGTTTTTGCTTGTCGATGGAGGTTTGTATGTTATAGTTGTGTCCATTGATTGAAGTAACATTGATATCCATTTGGG ATGCAGTCGATGGAAGCCTCCACTTCCATGGAAGTGGAAACAGTTTCAACACAAACGAAAGATGTAGTTAGCACATTGCCAACAAAACCACAATTTGATCCTCTAAAGCCTCATGAGATGAACGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAGCAGATGAAAATTGACATCCGAATGAATCTCAAGGCACGGAAAGTTGAATTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCATGCCTTCATGCTCGGTTTCGATGTGATCGATGCCATTGCCCTCTTACGGGTGGATGAACTCTATGTGGAATCTTTTGAGATTAAAGATGTTAAAACATTGCGAGGCGAGCACTTGTCCCGTGCCATAGGAAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAATGCCACGAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCTAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTTATTTTAGGGTCCCCTGCAGGTAAAGTTTATTCAAAACTGAGAGCAGTGACAGCCAGATTGGCAGAAAGGTTTTGA MQSMEASTSMEVETVSTQTKDVVSTLPTKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF Homology
BLAST of Tan0021374 vs. ExPASy Swiss-Prot
Match: Q9VR89 (RNA-binding protein pno1 OS=Drosophila melanogaster OX=7227 GN=l(1)G0004 PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.0e-66 Identity = 123/187 (65.78%), Postives = 156/187 (83.42%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy Swiss-Prot
Match: A7RP64 (RNA-binding protein pno1 OS=Nematostella vectensis OX=45351 GN=pno1 PE=3 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.6e-65 Identity = 119/196 (60.71%), Postives = 157/196 (80.10%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy Swiss-Prot
Match: Q29IG6 (RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=l(1)G0004 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.3e-65 Identity = 120/178 (67.42%), Postives = 153/178 (85.96%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy Swiss-Prot
Match: Q6VEU3 (RNA-binding protein PNO1 OS=Danio rerio OX=7955 GN=pno1 PE=2 SV=2) HSP 1 Score: 249.2 bits (635), Expect = 4.4e-65 Identity = 124/211 (58.77%), Postives = 162/211 (76.78%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy Swiss-Prot
Match: Q6VBQ6 (RNA-binding protein PNO1 OS=Oryzias latipes OX=8090 GN=pno1 PE=2 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 8.2e-64 Identity = 118/196 (60.20%), Postives = 156/196 (79.59%), Query Frame = 0
BLAST of Tan0021374 vs. NCBI nr
Match: XP_008449001.1 (PREDICTED: RNA-binding protein pno1 [Cucumis melo]) HSP 1 Score: 425.6 bits (1093), Expect = 2.6e-115 Identity = 219/224 (97.77%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Tan0021374 vs. NCBI nr
Match: XP_022932417.1 (RNA-binding protein pno1 [Cucurbita moschata]) HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114 Identity = 218/224 (97.32%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Tan0021374 vs. NCBI nr
Match: KAG7015597.1 (RNA-binding protein pno1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 421.8 bits (1083), Expect = 3.7e-114 Identity = 217/224 (96.88%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Tan0021374 vs. NCBI nr
Match: XP_038904158.1 (RNA-binding protein pno1 [Benincasa hispida]) HSP 1 Score: 420.6 bits (1080), Expect = 8.3e-114 Identity = 216/224 (96.43%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Tan0021374 vs. NCBI nr
Match: KAG6577533.1 (Gamma-tubulin complex component 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113 Identity = 216/224 (96.43%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy TrEMBL
Match: A0A1S3BLP2 (RNA-binding protein pno1 OS=Cucumis melo OX=3656 GN=LOC103491005 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115 Identity = 219/224 (97.77%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy TrEMBL
Match: A0A6J1EWL7 (RNA-binding protein pno1 OS=Cucurbita moschata OX=3662 GN=LOC111438772 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 8.1e-115 Identity = 218/224 (97.32%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy TrEMBL
Match: A0A6J1HQ98 (RNA-binding protein pno1-like OS=Cucurbita maxima OX=3661 GN=LOC111465109 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114 Identity = 216/224 (96.43%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy TrEMBL
Match: A0A0A0L7D9 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G045150 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114 Identity = 217/224 (96.88%), Postives = 221/224 (98.66%), Query Frame = 0
BLAST of Tan0021374 vs. ExPASy TrEMBL
Match: A0A6J1KXN9 (RNA-binding protein pno1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498497 PE=3 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113 Identity = 218/224 (97.32%), Postives = 218/224 (97.32%), Query Frame = 0
BLAST of Tan0021374 vs. TAIR 10
Match: AT3G13230.1 (RNA-binding KH domain-containing protein ) HSP 1 Score: 345.1 bits (884), Expect = 4.2e-95 Identity = 176/219 (80.37%), Postives = 198/219 (90.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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