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Tan0021289 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGTACTTCGAAAAACTCCAAACATACGTGGACGAAGGTCGAGGATGCAAGGTTGGTAGAGTCATTGGTATCTTTAGTACAAAATGGGTGGCAATCAGACAACGAGACCTTCAGGCCTGGATATTTGCAACATCTCCAAAAGATGCTAGCGGAGAAATTGGCTAATTCATCATTAGAACAAAACACTATAAATTGTAAGGTGAGAACTCTGAAAAAGAAATACAATGTTGTTGTAGAGAAGCTTGGTAATGTTTATAGTGGATTTAGATGGAATGAGGTATTTAAGTGTGTTGAGGCAGAGAAGAAGGTATTTGATGCATGGGTTAAAGTGAGATAGTACTATTATAGCATATTGTTATTATCATTTATTGTAGATATATGTAATATCTGTTCATTTGAAGAGCTATACAAACACAAAGGGGATGAGGAACAAACCATTTCTACACTATGATGATCTGACATTTGTCTTCGGAAAAGATAGAGCTACAGGAATTGGACGTAGAGACCTCAGTTGA ATGACAGGTACTTCGAAAAACTCCAAACATACGTGGACGAAGGTCGAGGATGCAAGGTTGGTAGAGTCATTGGTATCTTTAGTACAAAATGGGTGGCAATCAGACAACGAGACCTTCAGGCCTGGATATTTGCAACATCTCCAAAAGATGCTAGCGGAGAAATTGGCTAATTCATCATTAGAACAAAACACTATAAATTGTAAGGTGAGAACTCTGAAAAAGAAATACAATGTTGTTGTAGAGAAGCTTGGTAATGTTTATAGTGGATTTAGATGGAATGAGGTATTTAAGTGTGTTGAGGCAGAGAAGAAGGTATTTGATGCATGGGTTAAAAGCTATACAAACACAAAGGGGATGAGGAACAAACCATTTCTACACTATGATGATCTGACATTTGTCTTCGGAAAAGATAGAGCTACAGGAATTGGACGTAGAGACCTCAGTTGA ATGACAGGTACTTCGAAAAACTCCAAACATACGTGGACGAAGGTCGAGGATGCAAGGTTGGTAGAGTCATTGGTATCTTTAGTACAAAATGGGTGGCAATCAGACAACGAGACCTTCAGGCCTGGATATTTGCAACATCTCCAAAAGATGCTAGCGGAGAAATTGGCTAATTCATCATTAGAACAAAACACTATAAATTGTAAGGTGAGAACTCTGAAAAAGAAATACAATGTTGTTGTAGAGAAGCTTGGTAATGTTTATAGTGGATTTAGATGGAATGAGGTATTTAAGTGTGTTGAGGCAGAGAAGAAGGTATTTGATGCATGGGTTAAAAGCTATACAAACACAAAGGGGATGAGGAACAAACCATTTCTACACTATGATGATCTGACATTTGTCTTCGGAAAAGATAGAGCTACAGGAATTGGACGTAGAGACCTCAGTTGA MTGTSKNSKHTWTKVEDARLVESLVSLVQNGWQSDNETFRPGYLQHLQKMLAEKLANSSLEQNTINCKVRTLKKKYNVVVEKLGNVYSGFRWNEVFKCVEAEKKVFDAWVKSYTNTKGMRNKPFLHYDDLTFVFGKDRATGIGRRDLS Homology
BLAST of Tan0021289 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida]) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45 Identity = 90/139 (64.75%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of Tan0021289 vs. NCBI nr
Match: XP_038902479.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 188.7 bits (478), Expect = 3.5e-44 Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 0
BLAST of Tan0021289 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida]) HSP 1 Score: 185.7 bits (470), Expect = 3.0e-43 Identity = 87/139 (62.59%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of Tan0021289 vs. NCBI nr
Match: XP_038889264.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 183.3 bits (464), Expect = 1.5e-42 Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 0
BLAST of Tan0021289 vs. NCBI nr
Match: XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 181.8 bits (460), Expect = 4.3e-42 Identity = 85/141 (60.28%), Postives = 104/141 (73.76%), Query Frame = 0
BLAST of Tan0021289 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36 Identity = 76/143 (53.15%), Postives = 105/143 (73.43%), Query Frame = 0
BLAST of Tan0021289 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36 Identity = 76/143 (53.15%), Postives = 105/143 (73.43%), Query Frame = 0
BLAST of Tan0021289 vs. ExPASy TrEMBL
Match: A0A5D3CM34 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001480 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.5e-35 Identity = 74/143 (51.75%), Postives = 102/143 (71.33%), Query Frame = 0
BLAST of Tan0021289 vs. ExPASy TrEMBL
Match: A0A5A7VFF1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G002210 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 3.2e-35 Identity = 74/142 (52.11%), Postives = 101/142 (71.13%), Query Frame = 0
BLAST of Tan0021289 vs. ExPASy TrEMBL
Match: A0A5D3D513 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001660 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 3.2e-35 Identity = 74/142 (52.11%), Postives = 101/142 (71.13%), Query Frame = 0
BLAST of Tan0021289 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 2.0e-05 Identity = 37/141 (26.24%), Postives = 63/141 (44.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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