Tan0021263 (gene) Snake gourd v1

Overview


Name	Tan0021263
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein OSB2, chloroplastic-like
Location	LG06: 9396018 .. 9402179 (-)
RNA-Seq Expression	Tan0021263
Synteny	Tan0021263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATGGCGCTAGAACAAACCCTATCTTTTTCGTCATCACTGTTATCAAAACACTCCATTCTCTCCATCCCTAGAAACAAATTACGAACAACTTCTTTCTCTCCATTTCTCTCGCGTTTAAACGCTGCTAAACAGCTCCGAATCGCTACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTGTAACCTACCCTAAACCTCCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTGAGTCTCATCGGGACCGTTGGTCTGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGTACTAATCTTTTTTTTCTTTTCGAAATGGGGTTTGATTGCATTTCAGTAGAAGATTGAATATAATGTTTTTTTCTTTGGGTGAGGTGATGAAGTTATTTGCAAATTTTGGAGAGTAAGCTCTTGAGTAGTTAAAGTTGAGATGTTAAGAATATGGAAATTTTAGGGCCATGGTTCTTATGGACTTCATTTCTGTTTCACATGGGAGTGGCATTCCCAAAATTGGTGTCCCAATTTCAGTAGGATGTAGAAACCATATGAATCTTAAAATGCATGAACTTATTTCAGAAAAAATGGCGGCTTTTTATGGTTTACCAAGCTTGGAAGGAAGTTACGCGAATGGGAGGATGTTTGGAATTTGACACATTTTAATATTCTTAAAAATGAAAGGTTAAAGTTAAATGAGTGTTAATTTATAATAAAGGAAATTAATTTCTTTTCTGTTGTAGGAGTTTACTTGTTTCATTTCTCTGAATCTATCCTACCATAAGGCCAACTAATCAATTGTCATTTGAAGCAAATATTATCTGCTGGTGCATCCTAGAACGATTTCATTCCAACCACCTCTAGTCTCTGCTCTGTGACCCATATCAGCTGCCAAATTATTAGCCTTTTCACCGTGTTTAACTTTATAATCATCCAAAGTTCTTGTAATTTTGTTATTGTGTTAGTTGTTCTTATAACTTGGTTAGGTAGAGCAGCAATATGCTTGGCATGAAGTGACAACTATGGGTTAACCTAATGGTCATTAGGAAAAGTGAAAAGGTAAAGGGACTTAAGAGAATAGGTTTAAACCCATAGTGATCACCTTCCTCGGATATTAAAGTTTTTCGAGATTCTTGACGCTTAAATTTTGTTCAGATAGAGGGTAGGAGTTGTCCCATGAGTTAAGTCAATGTTTTCCTAAGCTAGCCTAGGCACTTATAATTAACCAAAACAAAAACTTGGCATGAAGTACTTTCTAGTCATATTAATATAGCATAGTAGAGGGCAATATGAGCTGGCAAGACATTACTCCAATTGGGGTTGATAAAATTTAAAAGAAAAGGGGAAAACAAGGGGAAGAAGAAGAAGAAGAAGAATCATAACTACCAAAATCCAAGGGTAGGGAAAACACACTCACCACACAAGGCACCAAAATATCATAGAGGTTACCAATGTCGTCCTTGGAAATTTATTCTACTTCTTTTCGGATTGAGTTCTGAAGTCAATCCAATGTCGACATTGGTCCATGGAATCTTACATTTTCTCTTGAAAGGGTGACTGCAAAAATTTGAATGAGGAACTTTCGAGTCTTGTATGCTTGAGAGAGCATTAAAGTATGGAGGTAGTGCTAAATTTAAAAGAAAGAAAAAAAGGGAAGAAGAAGAACCATTACTGCCAAAATCCAAGGGTAGGGAAAACACACTCACCACACAAAGGCACCAAAATATCATAGAGGTTACCAGTGTCGTCCTTGAAATTTATTCTTCTTCTTTTTCAGATTGAGTTACCAATTCAAACCAATGCTGACATTGGTCCATGGAATCTTACATTTTCTCTTGAAAGGGTGACAACTTTTGAGTCTCATGCTTGAGAGAGCATTAGGTTAAACTAAGTATGGAGGTAGTTCTAAATTTTAAGCTTAATGGGTAATGAATAGTAAGTGAATGTCCCTTTTTGAATTCCACTATCCTTGCTAAATTTTGAGCTAAATCTTAGATTCAGTTTTTGCACTAACCTTGCTGCACATGACGCACCAAGAGGGAAAAAGCTAAGTGAATGTCCCTGTTTTGAATTCTATCATTCATATTGAGACCTCCCAAAGTAAGCATCCAAAGAAAGACCTGGATCTTTTCTGGAACCTTCAGAAGCCTTTGATCAATGATGGAGGCTGCCTCCACCAATTTACCAAAAAGAAACTCTTAGGGGTGGCTTGAAGAATCATGCACTCAAATTCTTCCATTCTCTAACAAGAATACTCCAAAATCCTCAAGAAGGAACAAACTACTCGCTCCCTATTATTTTAATTTTCTTCTAAAGCCTTGATTCCACCATCCTCTGTCTTTGTTCTTAGAATCGTCGACACATTTCCATTGGAATTAGTGAGGGGATAAAGTTCGAAGCTTGATGAATTGGTAGGGAAGTATGGATGATGGGTCCAAGGATCTTCTAAATATTTAACTAAAGAATCTGACCGACTTTAAATGTCGGAGGTGATCCATTTTTACATAAAGAAATAAAACTCTAAGCACGCTTTTGACTAATGAGCACATCATCTATCATATAGCTTCCTTACATATTTTCTATCAATTACTTGTACCAAGTACCATTAGATTCATTGGGGAAGCTCCTCGGTGAGGCACCTCCCTCCAAGAGAGTGGTACCTAAGCACATGCCTAGGTGCAACTTTTTAAATTATGACCTTGCACTTTAGCCTCGGAGGACTAATATACTTCAATGCACTTCTAGATATGCACGTCTTTTTGGTGCTCAAACTTACCAGTTCAAGTTTGCATCATCTTGTTAGTTATACTATTAGGGCAAATGTTATGCATTCTTTAAAAAATTAGGTACATATTGGTAATTACTAATTAGCTAGGTAATTACTAATTAAGGCGAGCTGCTTGCAATTTAAGGAAATCCCTGCAAGGGGACTCTGTGCTATCAAATTGAAATTACATTATTTTGATAGGAGATGGTTCAAAAAGAGGTTAGTTTAGAAGGTCCTTGAAAAAGTTGTTTCAGAGGATGCCCCCATTCAAGCTTTATGGTGTTGTGATTTGTTGGAAGGTGTTTATACCTTTTTGGAAATTGATGCTTTTGGCTGGGTTTTCGGTGAAGTTGTTGGTAGTTCAGGAGGTTTGTTATTTTTGTGGAAGGAAGCTAAAGTTTTGGTAAAAGAAGGGCGTCTGTTGAAGGATAATGGTTGTTTTCTGATAAGCAAGATGGAAGAGGTTCGAAGATTGGTTTTTTCTGTTGGTGGTGTTGGGTCTCTTTTGGAGGGGTTGTTGTGGGGCTTTGGGAATTCAGTGCTCCCTTGGTATTTTGTTCGTGTGTTTGTGCGATGCAGTTTTTATTTGTTGTGGTTCTCTATGTCTTGTATTCTTTTGCTTATCTTCATTCGAGCTTGTATTTTGAGCAGAAGTCTCTTTTCATTATATCAATGAAATTCTCTTGTCACCTTTTCAAAAAAAAAAAAAATACTAATTAGCTAGGGAATTGGTTAGAGTAGTTATACATAGAGTGAAATCAGAGGAATTAGAGATAGATGTATTATTGGGAATGATCTTCGGAGAGAACTAAGCCTCTTTAATGCTTGGTAACCCTTGTAGTTTTCCCCGTTTCAGTAGACATATCAATATCATATTTTCATTAATTTTCCTCTAAAACATTCAAGTCCCACTCATCCTTCATTTACCTTTTAAAGTAGTCATCTAACGTGTTTGTATCATACCTCTTTAGAAATTGACATGTCAACAGTTTAGTGTTGTATTGTATCCCTATCCTGTGTTCATGTTTGTGCTTCTTAAGTTATCTAGAATGTGTTTGTGCTTCTTAAGTTATCTAGAATGGGCATGCTTCTTGAGTTATATAGAAATTTTCCATTGAGCTTTATAGATCTAGTCACTCTACGTCCATTTTAATTTTTGTGAAGGAAATTTAGCGACATTAAAATCACCTGCTAAATGCCTAGCCTCTCATAGTCTATAAATTCCCAACTCTTCCCAAAAAAAAAAAGCTCCTCTTTCCTAATTATAGACACGGCAGACCATAATTCTTGAAAGCTACCAAAAAGGTTTATTGAAAGTACAAAAATGAACCATTAAAGAGAATGATCTAAGAACTACTTCCTTGCACAAAAAACAGAACCAGAGACCTCAAGATAATAATACCACCAGAAGAGCCCCAAACCTTTGATTACTTCCATTCCGCCCACATCTTTTCCAAACACTTTTGACTCAACTGGAAGACAAGAAAAAATTTTGTTTTCTTGAAGAATAAGCACCTCAGGTCTCTTGTGCAGTAAAACCTCCTTGGTGAACCTCCTTCTACTTATGCCCCAATTCCTAAATGAAGACCTTAGGAGACTCCATGAAGACCCATCCATCTTAGCCAACAAATTCTCAAGTTAGACAACTCAAAAGACAAATCTACACTCCTCTAGACATAGCAGAAAGAAGCCTGGTAGTACCCTGGTATTAGCTAGTGAGCTAAGTCTTTTGAATGCCTAGTTACCCTTTTGTCACTTTGCTCTATTGATTAGCATTTCCTATAGCATTTTTTGTTAGTTTCCCTCTCAACTTTTGGTCCCTATCACATTTTGCTTGCTTTGATGAGAACCAAGTTACATTAAGAGAGATAAAAAGAAGGAAGGAAAAAAAAACAGAAGGCATAACTTTGTTGAAGGACTCCTCATTTCTTTCATGCAAAATCTCCCACAAAGTTCTGCTTTCACTCCTTTGCACCACAGAACTTTAAAATTCGGATGTATAGATGGATTCAACATGGCATGAAATCTTCACATGTTCAAATATAGATTCAATCAGGACTATGATCCAGATCAGTATCTTGCTGAGATTTCCATTTGCCTATTCCAACATGCATAGTCGGCCTTTTCAGGATAAATTTAACATTCTGGGATGAATTGGCGCATGTTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTAAGTGGCCGGCTGATTGCAGATTTGGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTTTTGCCGTCTTTGTTCACATTATTCCATGGTTTTCTGTTCTTTCCTGAAGTAGATACTGATGTTTCTACATCTTTTGCAGGTAGTAGTTCAACAACTGAATTTTATAGAAAGAAGCAACTCAACAGCACCCCATTATGATCAGGACTCTAATTCCGTAATGGCAGGCATGGGATATTTTGAATTTAAGATTATTGGTGTGACACTTTGTTTTGCTTCAGGATCTTATTTGGTGACCTATCACATTTCTTCATGGGGAGAAATCTCGGCAGTGGTGCCGTTGATAATATGGGGTCCACACAAGAATTATGGCAAGCATTCTTCGCTAATCCTGTCGACTGGTGGGACAATAGGAAGAACAAGGTACTTGATTTATTCTTTTGCAATTTCCAGGATTCAAGTATCCTGTTTTGGATTCCAATTGTTCTTAAGGTGCACCAAGTCTGGTATTTGTGCTTTTATGAATGTTATTACTTCTGTTGTATTTTGCCAAAGAACATGTGAAGCTTTTCATTGATGCATGAAAAAACCTTAGGAGCTTAGGAGCTTACACCAAGCTGCATGATATAATAACATACATAAAATGTATGTTATTACTAAATATGGCAGAAAGCAGACCTCTTGAATGATAACATTTTCTTCTAAGAAACAATTTCATAGATGATATGATTCATATGAAATCACAAAAGAGGGAAAGTTGGGAGAGTCAAGTCTCAGAGCCAACCAAGACTTTAAAAAAATGCTTCCTTTTAGCTAAAAGCCTAAAAGAGTATTTAAGCTTTCCTTCACTATATGATTCACTTGGATCCTTGATGGGAGACGAGATTCACACCTTAATGTTAATACATTGAACTTTTGATTCTACTTGCAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTATGGGTTGAGGGCAGGTATAATCCACCTTGGGTGAAGTCCCAACTGGCAATATTGGACATGAGAATGGGTTCTCTTGATGAGCAGGAAGCTAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

mRNA sequence

ATGATAATGGCGCTAGAACAAACCCTATCTTTTTCGTCATCACTGTTATCAAAACACTCCATTCTCTCCATCCCTAGAAACAAATTACGAACAACTTCTTTCTCTCCATTTCTCTCGCGTTTAAACGCTGCTAAACAGCTCCGAATCGCTACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTGTAACCTACCCTAAACCTCCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTGAGTCTCATCGGGACCGTTGGTCTGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGATAAATTTAACATTCTGGGATGAATTGGCGCATGTTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTAAGTGGCCGGCTGATTGCAGATTTGGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTTTTGCCAAATCTCGGCAGTGGTGCCGTTGATAATATGGGGTCCACACAAGAATTATGGCAAGCATTCTTCGCTAATCCTGTCGACTGGTGGGACAATAGGAAGAACAAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTATGGGTTGAGGGCAGGTATAATCCACCTTGGGTGAAGTCCCAACTGGCAATATTGGACATGAGAATGGGTTCTCTTGATGAGCAGGAAGCTAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

Coding sequence (CDS)

ATGATAATGGCGCTAGAACAAACCCTATCTTTTTCGTCATCACTGTTATCAAAACACTCCATTCTCTCCATCCCTAGAAACAAATTACGAACAACTTCTTTCTCTCCATTTCTCTCGCGTTTAAACGCTGCTAAACAGCTCCGAATCGCTACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTGTAACCTACCCTAAACCTCCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTGAGTCTCATCGGGACCGTTGGTCTGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGATAAATTTAACATTCTGGGATGAATTGGCGCATGTTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTAAGTGGCCGGCTGATTGCAGATTTGGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTTTTGCCAAATCTCGGCAGTGGTGCCGTTGATAATATGGGGTCCACACAAGAATTATGGCAAGCATTCTTCGCTAATCCTGTCGACTGGTGGGACAATAGGAAGAACAAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTATGGGTTGAGGGCAGGTATAATCCACCTTGGGTGAAGTCCCAACTGGCAATATTGGACATGAGAATGGGTTCTCTTGATGAGCAGGAAGCTAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

Protein sequence

MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAMENYSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTETSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVLPNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY

Homology

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BLAST of Tan0021263 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.6e-24
Identity = 73/238 (30.67%), Postives = 115/238 (48.32%), Query Frame = 0


Query: 48  RIATRFPKCSAMEN----YSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASG 107
           +I++ FPK     +      +++  + KP     K  L NSVSL+G V   +++ +    
Sbjct: 17  QISSSFPKSRFFSDGESAVYHHARLFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPD 76

Query: 108 KDVAWTRLAVWK--SSTETSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADD- 167
           +   +T L V    +   +  I+L  WD +A     H++  + I VSGRL +    + D 
Sbjct: 77  RFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDV 136

Query: 168 --GKQQTYY-------------------KVLPNLGSGAVDNMGSTQE----LWQAFFANP 227
             G    Y                    ++  N  +   D++  +++    LWQ FF+NP
Sbjct: 137 YSGLNLDYQVKVAEVNYVAAPPSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNP 196

Query: 228 VDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAK 254
            DWWDNR+NKKNPK PDFKHKDTGEALW+     P W+  +L + D +    DE++ +
Sbjct: 197 YDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTR 253

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BLAST of Tan0021263 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17
Identity = 61/210 (29.05%), Postives = 99/210 (47.14%), Query Frame = 0


Query: 70  PKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFW 129
           P+P EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVAFQHVQKGNQIYVSGRLIAD---------------------------------L 189
            +LA  A ++V K +QI+VSG+L  D                                 +
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 VEADDGKQQTYYKVLPNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYP 242
           V +   K+++  K  P      +  +    + W     NP +WWD+R+NK N    P++P
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDI-VIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHP 265

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BLAST of Tan0021263 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16
Identity = 58/209 (27.75%), Postives = 97/209 (46.41%), Query Frame = 0


Query: 66  SVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTETS---- 125
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 126 ----WINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYY---------- 185
               WI + F  +LAH A  +++K ++++++G+++ D++++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 186 -------------------KVLPNL--GSGAVDNMGSTQ-------ELWQAFFANPVDWW 225
                              KVLP L    G + +  S Q        LW      P +W 
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWC 235

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BLAST of Tan0021263 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 185 QELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQL 238
           +E+W+    NP  WWDNR +K+NPK PDFKHK+TGEALW+    +P W  S+L
Sbjct: 377 EEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD--SPTWALSKL 427

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BLAST of Tan0021263 vs. ExPASy Swiss-Prot
Match: Q8DCJ0 (Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=ssb PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 30/113 (26.55%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 83  NSVSLIGTVGLPVELKHLASGKDVA---------WTRLAVWKSSTETSWINLTFWDELAH 142
           N V L+G +G   E++++ SG  VA         W   A  +   +T W  +T + +LA 
Sbjct: 7   NKVILVGNLGNDPEIRYMPSGGAVANITVATSETWRDKATGEPREKTEWHRVTLYGKLAE 66

Query: 143 VAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVLPNLGSGAVDNMGSTQE 187
           VA ++++KG+Q+Y+ G+L     +  +G+ +   +V+    +G +  +G  Q+
Sbjct: 67  VAGEYLRKGSQVYIEGQLQTRKWQDQNGQDRYSTEVVVQGYNGIMQMLGGRQQ 119

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BLAST of Tan0021263 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-132
Identity = 238/293 (81.23%), Postives = 252/293 (86.01%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           MIMALEQTL+ SSSLLSK+SI SIPRN+LR +SF PFLS LNA K LR ATRFPKCSAME
Sbjct: 1   MIMALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAPKHLRFATRFPKCSAME 60

Query: 61  NYSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTET 120
           NYS+YS TYPKP EIPWKK+LSNSVSLIGTVG+PVELKHLA+GKDVAWTRLAVWKSSTET
Sbjct: 61  NYSSYSPTYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL---------- 180
           SWINLTFWDELAHVA QH+QKGNQIYVSGRL+ADLVEADDGKQQTYYKV+          
Sbjct: 121 SWINLTFWDELAHVASQHIQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 -----------------PNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240
                              LGSGAVDN+GSTQELWQAFFANPVDWWDNRKNKKNPKYPDF
Sbjct: 181 NSTGPHYDQDSNSVMAGKKLGSGAVDNVGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240

Query: 241 KHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           KHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QEAKMANFVTNFDFPSY
Sbjct: 241 KHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEAKMANFVTNFDFPSY 293

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BLAST of Tan0021263 vs. NCBI nr
Match: XP_022155802.1 (protein OSB2, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 468.0 bits (1203), Expect = 5.4e-128
Identity = 231/293 (78.84%), Postives = 246/293 (83.96%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M+MALEQTLS SSSLL KH++LSIPRN+ R  S    LS L+AAK+LR A RFPKCSAME
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAAKRLRFARRFPKCSAME 60

Query: 61  NYSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTET 120
           N+SNYS +Y KPPEIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTET
Sbjct: 61  NFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL---------- 180
           SWINLTFWDELAH+AFQHVQKGNQI+VSGRL+ADLVEADDGKQQTYYKV+          
Sbjct: 121 SWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 -----------------PNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240
                              LG+GA DNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF
Sbjct: 181 ISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240

Query: 241 KHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           KHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 KHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Tan0021263 vs. NCBI nr
Match: XP_022155803.1 (protein OSB2, chloroplastic-like isoform X2 [Momordica charantia])

HSP 1 Score: 461.8 bits (1187), Expect = 3.9e-126
Identity = 230/293 (78.50%), Postives = 245/293 (83.62%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M+MALEQTLS SSSLL KH++LSIPRN+ R  S    LS L+AAK+LR A RFPKCSAME
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAAKRLRFARRFPKCSAME 60

Query: 61  NYSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTET 120
           N+SNYS +Y KPPEIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTET
Sbjct: 61  NFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL---------- 180
           SWINLTFWDELAH+AFQHVQKGNQI+VSGRL+ADLVEADDGKQQTYYKV+          
Sbjct: 121 SWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 -----------------PNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240
                              LG+GA DNMGSTQELWQAFFANPVDWWDNRKN KNPKYPDF
Sbjct: 181 ISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKN-KNPKYPDF 240

Query: 241 KHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           KHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 KHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 288

[Close]

BLAST of Tan0021263 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 9.6e-125
Identity = 230/294 (78.23%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M+MALEQTL  SSSL SK+SI SIPRN+L  +SF PF S LN  K LR    FPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 61  NYSNYS-VTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTE 120
           NY+NYS VTYPKP +IPWKKELSNSV+LIGTVGLPVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 121 TSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL--------- 180
           TSWI LTFWDELAH+A QHVQKGNQIYVSGRL+ADLVEADDGKQQTYYKV+         
Sbjct: 121 TSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 -----PNL-------------GSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240
                P+              GSGAVDN GSTQELWQAFFANPVDWWDNRKNKKNPKYPD
Sbjct: 181 SNSTAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           FKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLD+QEAKMANFVT+FDFPSY
Sbjct: 241 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Tan0021263 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 3.6e-124
Identity = 228/294 (77.55%), Postives = 243/294 (82.65%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M +ALEQTL+ SSS  SK+SI SIPRN+LR +SF PF S LN  K LR ATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSNYS-VTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTE 120
           NY+NYS VTYPKP EIPWKKELSNSV+LIGTVGLPVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL--------- 180
           TSWI+LTFWDELAH+A QHVQKGNQIYVSGRL+ADLVEADDGKQQTYYKV+         
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 -----PNL-------------GSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240
                P+               SGAVDN  STQELWQAFFANPVDWWDNRKNKKNPKYPD
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYPD 242

Query: 241 FKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           FKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Tan0021263 vs. ExPASy TrEMBL
Match: A0A6J1DQC6 (protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128
Identity = 231/293 (78.84%), Postives = 246/293 (83.96%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M+MALEQTLS SSSLL KH++LSIPRN+ R  S    LS L+AAK+LR A RFPKCSAME
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAAKRLRFARRFPKCSAME 60

Query: 61  NYSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTET 120
           N+SNYS +Y KPPEIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTET
Sbjct: 61  NFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL---------- 180
           SWINLTFWDELAH+AFQHVQKGNQI+VSGRL+ADLVEADDGKQQTYYKV+          
Sbjct: 121 SWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 -----------------PNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240
                              LG+GA DNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF
Sbjct: 181 ISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240

Query: 241 KHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           KHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 KHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Tan0021263 vs. ExPASy TrEMBL
Match: A0A6J1DNW7 (protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.9e-126
Identity = 230/293 (78.50%), Postives = 245/293 (83.62%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M+MALEQTLS SSSLL KH++LSIPRN+ R  S    LS L+AAK+LR A RFPKCSAME
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAAKRLRFARRFPKCSAME 60

Query: 61  NYSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTET 120
           N+SNYS +Y KPPEIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTET
Sbjct: 61  NFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL---------- 180
           SWINLTFWDELAH+AFQHVQKGNQI+VSGRL+ADLVEADDGKQQTYYKV+          
Sbjct: 121 SWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 -----------------PNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDF 240
                              LG+GA DNMGSTQELWQAFFANPVDWWDNRKN KNPKYPDF
Sbjct: 181 ISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKN-KNPKYPDF 240

Query: 241 KHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           KHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 KHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 288

[Close]

BLAST of Tan0021263 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.6e-125
Identity = 230/294 (78.23%), Postives = 244/294 (82.99%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M+MALEQTL  SSSL SK+SI SIPRN+L  +SF PF S LN  K LR    FPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 61  NYSNYS-VTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTE 120
           NY+NYS VTYPKP +IPWKKELSNSV+LIGTVGLPVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 121 TSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL--------- 180
           TSWI LTFWDELAH+A QHVQKGNQIYVSGRL+ADLVEADDGKQQTYYKV+         
Sbjct: 121 TSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 -----PNL-------------GSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240
                P+              GSGAVDN GSTQELWQAFFANPVDWWDNRKNKKNPKYPD
Sbjct: 181 SNSTAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           FKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLD+QEAKMANFVT+FDFPSY
Sbjct: 241 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Tan0021263 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.8e-124
Identity = 228/294 (77.55%), Postives = 243/294 (82.65%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M +ALEQTL+ SSS  SK+SI SIPRN+LR +SF PF S LN  K LR ATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSNYS-VTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTE 120
           NY+NYS VTYPKP EIPWKKELSNSV+LIGTVGLPVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL--------- 180
           TSWI+LTFWDELAH+A QHVQKGNQIYVSGRL+ADLVEADDGKQQTYYKV+         
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 -----PNL-------------GSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240
                P+               SGAVDN  STQELWQAFFANPVDWWDNRKNKKNPKYPD
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYPD 242

Query: 241 FKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           FKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Tan0021263 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.7e-124
Identity = 227/294 (77.21%), Postives = 243/294 (82.65%), Query Frame = 0


Query: 1   MIMALEQTLSFSSSLLSKHSILSIPRNKLRTTSFSPFLSRLNAAKQLRIATRFPKCSAME 60
           M +ALEQTL+ SSS  SK+SI SIPRN+LR +SF PF S LN  K LR ATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYSNYS-VTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTE 120
           NY+NYS VTYPKP EIPWKKELSNSV+LIGTVGLPVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYYKVL--------- 180
           TSWI+LTFWDELAH+A QHVQKGNQIYVSGRL+ADLVEADDGKQQTYYKV+         
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 -----PNL-------------GSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240
                P+               SGAVDN  STQELWQAFFANPVDWWDNRKNKK+PKYPD
Sbjct: 183 SNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKYPD 242

Query: 241 FKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 267
           FKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Tan0021263 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 112.5 bits (280), Expect = 5.4e-25
Identity = 73/238 (30.67%), Postives = 115/238 (48.32%), Query Frame = 0


Query: 48  RIATRFPKCSAMEN----YSNYSVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASG 107
           +I++ FPK     +      +++  + KP     K  L NSVSL+G V   +++ +    
Sbjct: 17  QISSSFPKSRFFSDGESAVYHHARLFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPD 76

Query: 108 KDVAWTRLAVWK--SSTETSWINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADD- 167
           +   +T L V    +   +  I+L  WD +A     H++  + I VSGRL +    + D 
Sbjct: 77  RFGVFTILRVKDPLNPNRSFRISLRMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDV 136

Query: 168 --GKQQTYY-------------------KVLPNLGSGAVDNMGSTQE----LWQAFFANP 227
             G    Y                    ++  N  +   D++  +++    LWQ FF+NP
Sbjct: 137 YSGLNLDYQVKVAEVNYVAAPPSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNP 196

Query: 228 VDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAK 254
            DWWDNR+NKKNPK PDFKHKDTGEALW+     P W+  +L + D +    DE++ +
Sbjct: 197 YDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of Tan0021263 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 92.4 bits (228), Expect = 5.8e-19
Identity = 61/210 (29.05%), Postives = 100/210 (47.62%), Query Frame = 0


Query: 70  PKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFW 129
           P+P EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVAFQHVQKGNQIYVSGRLIAD---------------------------------L 189
            +LA  A ++V K +QI+VSG+L  D                                 +
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 VEADDGKQQTYYKVLPNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYP 242
           V +   K+++  K  P +    +  +    + W     NP +WWD+R+NK N    P++P
Sbjct: 206 VMSSSEKEESGIKKQPGIAKQDI-VIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHP 265

[Close]

BLAST of Tan0021263 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-18
Identity = 61/210 (29.05%), Postives = 99/210 (47.14%), Query Frame = 0


Query: 70  PKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFW 129
           P+P EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVAFQHVQKGNQIYVSGRLIAD---------------------------------L 189
            +LA  A ++V K +QI+VSG+L  D                                 +
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 VEADDGKQQTYYKVLPNLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYP 242
           V +   K+++  K  P      +  +    + W     NP +WWD+R+NK N    P++P
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDI-VIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHP 265

[Close]

BLAST of Tan0021263 vs. TAIR 10
Match: AT1G31010.1 (organellar single-stranded DNA binding protein 4 )

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-17
Identity = 58/209 (27.75%), Postives = 97/209 (46.41%), Query Frame = 0


Query: 66  SVTYPKPPEIPWKKELSNSVSLIGTVGLPVELKHLASGKDVAWTRLAVWKSSTETS---- 125
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 126 ----WINLTFWDELAHVAFQHVQKGNQIYVSGRLIADLVEADDGKQQTYY---------- 185
               WI + F  +LAH A  +++K ++++++G+++ D++++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 186 -------------------KVLPNL--GSGAVDNMGSTQ-------ELWQAFFANPVDWW 225
                              KVLP L    G + +  S Q        LW      P +W 
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWC 235

[Close]

BLAST of Tan0021263 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 0


Query: 185 QELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQL 238
           +E+W+    NP  WWDNR +K+NPK PDFKHK+TGEALW+    +P W  S+L
Sbjct: 379 EEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD--SPTWALSKL 429

The following BLAST results are available for this feature:

BLAST of Tan0021263 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	7.6e-24	30.67	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GXH3	4.0e-17	29.05	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9FYJ2	1.5e-16	27.75	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q8GWJ4	1.9e-11	54.72	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8DCJ0	1.1e-06	26.55	Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) OX=21689...	[more]

BLAST of Tan0021263 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896738.1	1.6e-132	81.23	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_022155802.1	5.4e-128	78.84	protein OSB2, chloroplastic-like isoform X1 [Momordica charantia]	[more]
XP_022155803.1	3.9e-126	78.50	protein OSB2, chloroplastic-like isoform X2 [Momordica charantia]	[more]
XP_004146958.1	9.6e-125	78.23	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
XP_008451268.1	3.6e-124	77.55	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]

BLAST of Tan0021263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQC6	2.6e-128	78.84	protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DNW7	1.9e-126	78.50	protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0K4W2	4.6e-125	78.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A1S3BRV3	1.8e-124	77.55	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	6.7e-124	77.21	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]

BLAST of Tan0021263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	5.4e-25	30.67	Primosome PriB/single-strand DNA-binding	[more]
AT4G20010.2	5.8e-19	29.05	plastid transcriptionally active 9	[more]
AT4G20010.1	2.9e-18	29.05	plastid transcriptionally active 9	[more]
AT1G31010.1	1.1e-17	27.75	organellar single-stranded DNA binding protein 4	[more]
AT5G44785.2	1.4e-12	54.72	organellar single-stranded DNA binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 83..169 e-value: 4.2E-14 score: 52.5
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 81..182 score: 16.82794
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 85..169 e-value: 1.09338E-16 score: 71.4893
None	No IPR available	GENE3D	2.40.50.140		coord: 81..212 e-value: 1.0E-16 score: 63.2
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 26..170 coord: 175..258
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 175..258
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 26..170
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 83..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021263.1	Tan0021263.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding