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Tan0021260 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAAGGATCTCGAAGTTGGTGGGTTCCCTGCCAAGGACTACCAAGACCCACCTCCAACCCCACTGATCGACGCCGACGAGTTCACCCAATGGTCATTTTACAGAGTTATCATAGTCGAGTTTGTCGCCACGCTTCTCTTCTTGTACGTCACTGTTCTCACCGTCATTGGCTACAACAACCAATCCGACACCAAAAACGGCGACCAAATCTGTGGCGGCGTCGACACTCTCGGCATTGCTTGGGTATTCGGCGACATGATCTTCGTCCTCGTCTACCGCACCGCTGGAATTTTTGGGCAATTTATTTTTCTTTCGTTGCTCTGTTTCTCTCTGTTTCCGATTGGGTTGAGTAAAAATTTACCATTTTTTGTTGAACTTTGTAGGATGGCACATTAA ATGTCTAAGGATCTCGAAGTTGGTGGGTTCCCTGCCAAGGACTACCAAGACCCACCTCCAACCCCACTGATCGACGCCGACGAGTTCACCCAATGGTCATTTTACAGAGTTATCATAGTCGAGTTTGTCGCCACGCTTCTCTTCTTGTACGTCACTGTTCTCACCGTCATTGGCTACAACAACCAATCCGACACCAAAAACGGCGACCAAATCTGTGGCGGCGTCGACACTCTCGGCATTGCTTGGGTATTCGGCGACATGATCTTCGTCCTCGTCTACCGCACCGCTGGAATTTTTGGGCAATTTATTTTTCTTTCGTTGCTCTGTTTCTCTCTGTTTCCGATTGGGTTGAGTAAAAATTTACCATTTTTTGTTGAACTTTGTAGGATGGCACATTAA ATGTCTAAGGATCTCGAAGTTGGTGGGTTCCCTGCCAAGGACTACCAAGACCCACCTCCAACCCCACTGATCGACGCCGACGAGTTCACCCAATGGTCATTTTACAGAGTTATCATAGTCGAGTTTGTCGCCACGCTTCTCTTCTTGTACGTCACTGTTCTCACCGTCATTGGCTACAACAACCAATCCGACACCAAAAACGGCGACCAAATCTGTGGCGGCGTCGACACTCTCGGCATTGCTTGGGTATTCGGCGACATGATCTTCGTCCTCGTCTACCGCACCGCTGGAATTTTTGGGCAATTTATTTTTCTTTCGTTGCTCTGTTTCTCTCTGTTTCCGATTGGGTTGAGTAAAAATTTACCATTTTTTGTTGAACTTTGTAGGATGGCACATTAA MSKDLEVGGFPAKDYQDPPPTPLIDADEFTQWSFYRVIIVEFVATLLFLYVTVLTVIGYNNQSDTKNGDQICGGVDTLGIAWVFGDMIFVLVYRTAGIFGQFIFLSLLCFSLFPIGLSKNLPFFVELCRMAH Homology
BLAST of Tan0021260 vs. ExPASy Swiss-Prot
Match: P43287 (Aquaporin PIP2-2 OS=Arabidopsis thaliana OX=3702 GN=PIP2-2 PE=1 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 7.6e-33 Identity = 71/104 (68.27%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy Swiss-Prot
Match: P30302 (Aquaporin PIP2-3 OS=Arabidopsis thaliana OX=3702 GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.3e-32 Identity = 71/104 (68.27%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy Swiss-Prot
Match: P43286 (Aquaporin PIP2-1 OS=Arabidopsis thaliana OX=3702 GN=PIP2-1 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 9.2e-31 Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy Swiss-Prot
Match: Q9ATM6 (Aquaporin PIP2-4 OS=Zea mays OX=4577 GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30 Identity = 75/138 (54.35%), Postives = 89/138 (64.49%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy Swiss-Prot
Match: Q9ATM4 (Aquaporin PIP2-7 OS=Zea mays OX=4577 GN=PIP2-7 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 6.0e-30 Identity = 75/136 (55.15%), Postives = 89/136 (65.44%), Query Frame = 0
BLAST of Tan0021260 vs. NCBI nr
Match: XP_022978378.1 (aquaporin PIP2-2-like [Cucurbita maxima]) HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40 Identity = 87/103 (84.47%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of Tan0021260 vs. NCBI nr
Match: XP_023543139.1 (aquaporin PIP2-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39 Identity = 86/103 (83.50%), Postives = 87/103 (84.47%), Query Frame = 0
BLAST of Tan0021260 vs. NCBI nr
Match: XP_022926050.1 (aquaporin PIP2-2-like [Cucurbita moschata] >KAG6604426.1 Aquaporin PIP2-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034572.1 Aquaporin PIP2-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39 Identity = 86/103 (83.50%), Postives = 87/103 (84.47%), Query Frame = 0
BLAST of Tan0021260 vs. NCBI nr
Match: XP_038880916.1 (aquaporin PIP2-2-like [Benincasa hispida]) HSP 1 Score: 171.8 bits (434), Expect = 4.0e-39 Identity = 92/131 (70.23%), Postives = 100/131 (76.34%), Query Frame = 0
BLAST of Tan0021260 vs. NCBI nr
Match: NP_001292671.1 (aquaporin PIP2-2 [Cucumis sativus] >AHB33479.1 plasma intrinsic protein 2-3 [Cucumis sativus] >KGN48149.1 hypothetical protein Csa_002998 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 2.6e-38 Identity = 90/131 (68.70%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy TrEMBL
Match: A0A6J1ISY0 (aquaporin PIP2-2-like OS=Cucurbita maxima OX=3661 GN=LOC111478388 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40 Identity = 87/103 (84.47%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy TrEMBL
Match: A0A6J1EJX2 (aquaporin PIP2-2-like OS=Cucurbita moschata OX=3662 GN=LOC111433285 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 8.6e-40 Identity = 86/103 (83.50%), Postives = 87/103 (84.47%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy TrEMBL
Match: V5RDW7 (Plasma intrinsic protein 2-3 OS=Cucumis sativus OX=3659 GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38 Identity = 90/131 (68.70%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy TrEMBL
Match: A0A1S3BL05 (aquaporin PIP2-2-like OS=Cucumis melo OX=3656 GN=LOC107990277 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.6e-38 Identity = 83/103 (80.58%), Postives = 87/103 (84.47%), Query Frame = 0
BLAST of Tan0021260 vs. ExPASy TrEMBL
Match: A0A6J1CQG7 (aquaporin PIP2-2-like OS=Momordica charantia OX=3673 GN=LOC111013638 PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.8e-37 Identity = 80/103 (77.67%), Postives = 86/103 (83.50%), Query Frame = 0
BLAST of Tan0021260 vs. TAIR 10
Match: AT2G37170.1 (plasma membrane intrinsic protein 2 ) HSP 1 Score: 141.4 bits (355), Expect = 5.4e-34 Identity = 71/104 (68.27%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Tan0021260 vs. TAIR 10
Match: AT2G37180.1 (Aquaporin-like superfamily protein ) HSP 1 Score: 140.6 bits (353), Expect = 9.2e-34 Identity = 71/104 (68.27%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Tan0021260 vs. TAIR 10
Match: AT3G53420.1 (plasma membrane intrinsic protein 2A ) HSP 1 Score: 134.4 bits (337), Expect = 6.6e-32 Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Tan0021260 vs. TAIR 10
Match: AT3G53420.2 (plasma membrane intrinsic protein 2A ) HSP 1 Score: 134.4 bits (337), Expect = 6.6e-32 Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Tan0021260 vs. TAIR 10
Match: AT5G60660.1 (plasma membrane intrinsic protein 2;4 ) HSP 1 Score: 124.4 bits (311), Expect = 6.8e-29 Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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