Tan0021149 (gene) Snake gourd v1

Overview


Name	Tan0021149
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	PSI subunit V
Location	LG08: 15723956 .. 15725381 (-)
RNA-Seq Expression	Tan0021149
Synteny	Tan0021149

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCGTCGAACACCAGAGCTTTGATCTCTCCCAAAGGCCTCTCTGCCTCGCCACTCCGACGCATCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGGTAACCCAACCCCATTTTCCAAATCTACATAATAATCCGCAAATCTCTGAGCTTTTAAGATATATACTATTTCAAGGGATACAAACTTAGGATCCCTACAGGTCAAGTTAGAACTGAATGATATAAACGAATTAGCTGTATAAAAGTTTAACAGGTGTGGTTGGGAGTGCCTTATAAGTTATAAGTACTTTAATAATAATATACTTTACTGTTTAGTTTTGGTATTTTAAAAGCGGTTTTTATCTAGTTAGAACTATTATTTAAAGGATTTATATTTACTTAAATGATGAACAACTAAAATTAAAATAGCTAAATTATAAAAGAATTAAAAAAAATAAAAACTTATATTATAAGAAAATGAAATAAGTATGCAGAGAAAGATTAGTGAGAGGAATTATAATTATAAAGAATATGGTAAGATAAAGTATGAAGAGAGAGGTTAGTAAGAGAAATTGAAAGCATAAAGAATATATAGTAAGAGAACGTGCGTAAGACGATTTGAGAAGAGATTAATAGAGAGAATATACTTGACAAGTTAACAAGAGAAAATGTATAAAGATAGTTAGAGAACAGGTGTTAGAGTGTGCAGATATAAGTTACTAAAGAGTGTTGAAAAGTTAAATGGAAAAATGTATGTGAAGAGAGTAATTAGAAAAAAAGAATGTGTGTGATGAGAGATTACAATAAAGTATTAAAGTCAAATAAAAAACATAGCCATGTTTATTTGAAAAGCACTTCTCCACATGTTAACAACCTATTGAAACTGTTGCAGCCAACTTACCAAGTGATCCAGCCAATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCTTGGTACCTCTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTCTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTAAGGAACACACCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGTCTCATTGTCATTTTGAGCATCTGTATGACAATGTATGGCGTTGCATCCTTCAATGAAGGAGAGCCATCCACCGCACCGTCATTGACCTTGACAGGCCGGAAGAAGACCCCGGATCAGCTGCAAACAGCCGATGGGTGGGCGAAATTCTCTGGCGGGTTCTTCTTTGGTGGGATCTCCGGTGTGATCTGGGCTTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTACGTCAAGTAG

mRNA sequence

ATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCGTCGAACACCAGAGCTTTGATCTCTCCCAAAGGCCTCTCTGCCTCGCCACTCCGACGCATCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCAACTTACCAAGTGATCCAGCCAATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCTTGGTACCTCTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTCTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTAAGGAACACACCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGTCTCATTGTCATTTTGAGCATCTGTATGACAATGTATGGCGTTGCATCCTTCAATGAAGGAGAGCCATCCACCGCACCGTCATTGACCTTGACAGGCCGGAAGAAGACCCCGGATCAGCTGCAAACAGCCGATGGGTGGGCGAAATTCTCTGGCGGGTTCTTCTTTGGTGGGATCTCCGGTGTGATCTGGGCTTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTACGTCAAGTAG

Coding sequence (CDS)

ATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCGTCGAACACCAGAGCTTTGATCTCTCCCAAAGGCCTCTCTGCCTCGCCACTCCGACGCATCCCTGCAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCAACTTACCAAGTGATCCAGCCAATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCTTGGTACCTCTCAAACCTCCCAGCCTACAGAACAGCAGTCAGCCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCCCATGGTTTTCTTCTCGTCGGCCCATTTGTCAAAGCTGGGCCTCTAAGGAACACACCCTACGCCGGAGGAGCCGGCTCACTGGCCGCCGGCGGTCTCATTGTCATTTTGAGCATCTGTATGACAATGTATGGCGTTGCATCCTTCAATGAAGGAGAGCCATCCACCGCACCGTCATTGACCTTGACAGGCCGGAAGAAGACCCCGGATCAGCTGCAAACAGCCGATGGGTGGGCGAAATTCTCTGGCGGGTTCTTCTTTGGTGGGATCTCCGGTGTGATCTGGGCTTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTACGTCAAGTAG

Protein sequence

MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK

Homology

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BLAST of Tan0021149 vs. ExPASy Swiss-Prot
Match: Q39654 (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 6.4e-114
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILS+C+TMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

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BLAST of Tan0021149 vs. ExPASy Swiss-Prot
Match: Q41385 (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 5.3e-92
Identity = 170/219 (77.63%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPA--RTHSFTIRAIQADKPTYQ 60
           MA  TSP+ASQL S F    T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPTYQ
Sbjct: 1   MAATTSPMASQLKSGF---TTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFV 120
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGFLLVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 121 KAGPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQ 180
           KAGPLRNT YAG AGSLAA GL+VILS+C+TMYG+ASF EGEPS AP+LTLTGRKK PDQ
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQ+ADGWAKF+GGFFFGG+SGV WA FL+YVLDLPYY K
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

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BLAST of Tan0021149 vs. ExPASy Swiss-Prot
Match: Q9SUI4 (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 335.9 bits (860), Expect = 3.4e-91
Identity = 168/219 (76.71%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPA-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQ 180
           KAGPLRNT YAG AGSLAA GL+VILS+C+T+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

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BLAST of Tan0021149 vs. ExPASy Swiss-Prot
Match: P23993 (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.5e-81
Identity = 154/218 (70.64%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MATA-TSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQV 60
           MATA   P+ASQ+  S       A   P+G+S + L R P     F ++A+++DKPTYQV
Sbjct: 1   MATAYAPPMASQVMKS-----GLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVK 120
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+LLVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 121 AGPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQL 180
            GPLRNTP  G AG+L A GL+ ILS+C+TMYGVASFNEGEPSTAP LTLTGRKK  D+L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPY+ K
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

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BLAST of Tan0021149 vs. ExPASy Swiss-Prot
Match: Q9TM17 (Photosystem I reaction center subunit XI OS=Cyanidium caldarium OX=2771 GN=psaL PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33
Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 60  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVK 119
           I+P   +PF+G+L TPV SS +  WYL NLP YR  +SPLLRG+E+G+AHG+ ++GPF K
Sbjct: 5   IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64

Query: 120 AGPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQL 179
            GPLRNT  +  +G +AA GLI+I SI M +YG+ +F+  E +              D+L
Sbjct: 65  LGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKL 124

Query: 180 QTADGWAKFSGGFFFGGISGVIWAYFLL 208
           QTA+GW + + GF  G + G  +AY LL
Sbjct: 125 QTANGWRQLASGFLLGAVGGAGFAYILL 138

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BLAST of Tan0021149 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-112
Identity = 211/217 (97.24%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Tan0021149 vs. NCBI nr
Match: XP_008441854.1 (PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo])

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-112
Identity = 212/217 (97.70%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Tan0021149 vs. NCBI nr
Match: XP_022965497.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 209/217 (96.31%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Tan0021149 vs. NCBI nr
Match: XP_038889551.1 (photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 211/217 (97.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKNPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Tan0021149 vs. NCBI nr
Match: NP_001267647.1 (photosystem I reaction center subunit XI, chloroplastic [Cucumis sativus] >KGN61263.1 hypothetical protein Csa_006403 [Cucumis sativus] >BAA11677.1 subunit of photosystem I [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILS+C+TMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Tan0021149 vs. ExPASy TrEMBL
Match: A0A6J1D7U0 (PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 211/217 (97.24%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Tan0021149 vs. ExPASy TrEMBL
Match: A0A1S3B555 (PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 212/217 (97.70%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Tan0021149 vs. ExPASy TrEMBL
Match: A0A6J1HKH3 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112
Identity = 209/217 (96.31%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILSIC+TMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

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BLAST of Tan0021149 vs. ExPASy TrEMBL
Match: A0A0A0LHJ8 (PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIP RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLIVILS+C+TMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Tan0021149 vs. ExPASy TrEMBL
Match: A0A6J1KBZ8 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111492490 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.1e-111
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPARTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASS TRAL++PKGLS SPLRRIPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSTTRALVAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120

Query: 121 GPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180
           GPLRNT YAGGAGSLAAGGLI ILSIC+TMYG+ASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIAILSICLTMYGIASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Tan0021149 vs. TAIR 10
Match: AT4G12800.1 (photosystem I subunit l )

HSP 1 Score: 335.9 bits (860), Expect = 2.4e-92
Identity = 168/219 (76.71%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPA-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTPYAGGAGSLAAGGLIVILSICMTMYGVASFNEGEPSTAPSLTLTGRKKTPDQ 180
           KAGPLRNT YAG AGSLAA GL+VILS+C+T+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

The following BLAST results are available for this feature:

BLAST of Tan0021149 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39654	6.4e-114	96.31	Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q41385	5.3e-92	77.63	Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=...	[more]
Q9SUI4	3.4e-91	76.71	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ...	[more]
P23993	5.5e-81	70.64	Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45...	[more]
Q9TM17	5.6e-33	46.62	Photosystem I reaction center subunit XI OS=Cyanidium caldarium OX=2771 GN=psaL ...	[more]

BLAST of Tan0021149 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149833.1	3.4e-112	97.24	photosystem I reaction center subunit XI, chloroplastic [Momordica charantia]	[more]
XP_008441854.1	3.4e-112	97.70	PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo...	[more]
XP_022965497.1	1.3e-111	96.31	photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima]	[more]
XP_038889551.1	1.3e-111	97.24	photosystem I reaction center subunit XI, chloroplastic [Benincasa hispida]	[more]
NP_001267647.1	1.3e-111	96.77	photosystem I reaction center subunit XI, chloroplastic [Cucumis sativus] >KGN61...	[more]

BLAST of Tan0021149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7U0	1.6e-112	97.24	PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1	[more]
A0A1S3B555	1.6e-112	97.70	PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1	[more]
A0A6J1HKH3	6.3e-112	96.31	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1	[more]
A0A0A0LHJ8	6.3e-112	96.77	PSI subunit V OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=3 SV=1	[more]
A0A6J1KBZ8	4.1e-111	95.39	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111492490 PE=3 SV=1	[more]

BLAST of Tan0021149 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12800.1	2.4e-92	76.71	photosystem I subunit l	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PFAM	PF02605	PsaL	coord: 59..211 e-value: 9.3E-58 score: 194.1
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	GENE3D	1.20.1240.10	Photosystem I PsaL, reaction centre subunit XI	coord: 54..217 e-value: 1.3E-72 score: 244.5
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	81568	Photosystem I reaction center subunit XI, PsaL	coord: 60..216
IPR022980	Photosystem I, reaction centre subunit XI	PANTHER	PTHR34803	FAMILY NOT NAMED	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021149.1	Tan0021149.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I