Tan0021146 (gene) Snake gourd v1

Overview


Name	Tan0021146
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	calmodulin-like protein 2
Location	LG02: 94556708 .. 94557448 (+)
RNA-Seq Expression	Tan0021146
Synteny	Tan0021146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCCTCCCATCATCAAACACAACTAACAATTCTTATAATTTCAATCCAACGCATTCGATCCATAAATCTCCAATTCTAAATTATTTCTCTGCCAGCTCTCAATCACCGCCATCGCTCATAAATTCCCCAATCCACGATCACTTTTAAATCATTTCCAATCCCCTGTTGCAATTTCCACCAAATGGGTATTTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGATCTCGAGCGGCGGAATCCACCGCTGACGACGGCGCTCCGGTAACCCACAGAGTCGTCTACGACGATGTGCTGGTAAGGGCGTTGATCACAGTGTTTGGGATGAGAGAAAACGGGAGAATTAAGAAGGAAAAGGCGAAGGGGGTGGTGGAGAAACTGGGGCTGATACAGAGTGAAGAAGAGAAGGAGAGGTTCGAGCTGCCGGCGGAGGGCGGCGACGAGATGGCGGTGGAGGAGGTGATCGGAGAAATGAAAGAGGAAAGGAAAAGAAATGAGCTGCTAAGGGAAGCGTTCAAGATATTTGATGTGGATGGAGATGGTTTCATTGATACAGTGGAATTGAAAAGAGTTCTTGAATGTTTGGGATTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGTGTTGTGGATGTGAATTTGGATGGGAAAGTTGATTTTATTGAGTTTCAATTAATGATGGGTGTCAAATGTTCTTGATTTGTTCTTGTTTTTTCATGCCAA

mRNA sequence

ATTCCCTCCCATCATCAAACACAACTAACAATTCTTATAATTTCAATCCAACGCATTCGATCCATAAATCTCCAATTCTAAATTATTTCTCTGCCAGCTCTCAATCACCGCCATCGCTCATAAATTCCCCAATCCACGATCACTTTTAAATCATTTCCAATCCCCTGTTGCAATTTCCACCAAATGGGTATTTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGATCTCGAGCGGCGGAATCCACCGCTGACGACGGCGCTCCGGTAACCCACAGAGTCGTCTACGACGATGTGCTGGTAAGGGCGTTGATCACAGTGTTTGGGATGAGAGAAAACGGGAGAATTAAGAAGGAAAAGGCGAAGGGGGTGGTGGAGAAACTGGGGCTGATACAGAGTGAAGAAGAGAAGGAGAGGTTCGAGCTGCCGGCGGAGGGCGGCGACGAGATGGCGGTGGAGGAGGTGATCGGAGAAATGAAAGAGGAAAGGAAAAGAAATGAGCTGCTAAGGGAAGCGTTCAAGATATTTGATGTGGATGGAGATGGTTTCATTGATACAGTGGAATTGAAAAGAGTTCTTGAATGTTTGGGATTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGTGTTGTGGATGTGAATTTGGATGGGAAAGTTGATTTTATTGAGTTTCAATTAATGATGGGTGTCAAATGTTCTTGATTTGTTCTTGTTTTTTCATGCCAA

Coding sequence (CDS)

ATGGGTATTTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGATCTCGAGCGGCGGAATCCACCGCTGACGACGGCGCTCCGGTAACCCACAGAGTCGTCTACGACGATGTGCTGGTAAGGGCGTTGATCACAGTGTTTGGGATGAGAGAAAACGGGAGAATTAAGAAGGAAAAGGCGAAGGGGGTGGTGGAGAAACTGGGGCTGATACAGAGTGAAGAAGAGAAGGAGAGGTTCGAGCTGCCGGCGGAGGGCGGCGACGAGATGGCGGTGGAGGAGGTGATCGGAGAAATGAAAGAGGAAAGGAAAAGAAATGAGCTGCTAAGGGAAGCGTTCAAGATATTTGATGTGGATGGAGATGGTTTCATTGATACAGTGGAATTGAAAAGAGTTCTTGAATGTTTGGGATTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGTGTTGTGGATGTGAATTTGGATGGGAAAGTTGATTTTATTGAGTTTCAATTAATGATGGGTGTCAAATGTTCTTGA

Protein sequence

MGISRFIGDFLQTLGGRSRAAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKKEKAKGVVEKLGLIQSEEEKERFELPAEGGDEMAVEEVIGEMKEERKRNELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKCS

Homology

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BLAST of Tan0021146 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-14
Identity = 48/130 (36.92%), Postives = 77/130 (59.23%), Query Frame = 0


Query: 48  VFGMRENGRIKKEKAKGVVEKLGLIQSEEEKERF--ELPAEGGDEMAVEE---VIGEMKE 107
           +F    +G+I K + K   + +G++  E E      ++   G   M ++E   +  EM E
Sbjct: 12  MFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVE 71

Query: 108 ERKRNELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGK 167
           E++  E +REAF++FD +GDGFI   EL+ VL  +GL +G  + + +KM+S VDV+ DG 
Sbjct: 72  EKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGM 131

Query: 168 VDFIEFQLMM 173
           V+F EF+ MM
Sbjct: 132 VNFKEFKQMM 141

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BLAST of Tan0021146 vs. ExPASy Swiss-Prot
Match: Q9FI19 (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 110 LREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQ 169
           L EAF +FD DGDGFI  VEL++VL+ LGL +   I ++EKM+  VD N DG+VDF EF+
Sbjct: 112 LEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFK 171

Query: 170 LMM 173
            MM
Sbjct: 172 NMM 174

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BLAST of Tan0021146 vs. ExPASy Swiss-Prot
Match: Q9SRR7 (Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-12
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 38  DDVLVRALITVFGMRENGRIKKEKAKGVVEKLGLIQSEEEKERF--ELPAEGGDEMAVEE 97
           D   +  +  +F    +G+I K++    +E LG+   +++  +   ++   G   + +EE
Sbjct: 2   DQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEE 61

Query: 98  VIG---EMKEERKRNELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMV 157
             G    + EER   E +REAF +FD + DGFI   EL+ VL  LGL +G  + + ++M+
Sbjct: 62  FGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMI 121

Query: 158 SVVDVNLDGKVDFIEFQLMM 173
           S VDV+ DG V+F EF+ MM
Sbjct: 122 SKVDVDGDGMVNFKEFKQMM 141

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BLAST of Tan0021146 vs. ExPASy Swiss-Prot
Match: Q84UL5 (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica OX=39947 GN=CML32 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 108 ELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIE 167
           E +REAFK+FDVDGDGFI   EL+ VL+ LGL +   +  + +M+  VD N DG+VDF E
Sbjct: 124 EEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGE 183

Query: 168 FQLMM 173
           F+ MM
Sbjct: 184 FKSMM 188

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BLAST of Tan0021146 vs. ExPASy Swiss-Prot
Match: Q9SVG9 (Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 110 LREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQ 169
           L EAFK+FD +GDGFI   EL+ VL+ LGL +G  +  +EKM+  VD N DG+VDF EF+
Sbjct: 121 LAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFK 180

Query: 170 LMM 173
            MM
Sbjct: 181 NMM 183

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BLAST of Tan0021146 vs. NCBI nr
Match: XP_022951438.1 (calmodulin-like protein 2 [Cucurbita moschata] >XP_023537761.1 calmodulin-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 2.8e-80
Identity = 160/178 (89.89%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSRAAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQT+GGRSRAA+STAD GAP  HRV++DDVL+RALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIQSEEEKERFELPAE-GGDEMAVEEVIGEMKEERKRNELLREAFKIFDV 120
           KAKGVVEKLGLI+SEEEKE FELPA+ GGDE+AVEEVIGEM+EE KRNELL EAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

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BLAST of Tan0021146 vs. NCBI nr
Match: KAG6585405.1 (putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020321.1 putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 159/178 (89.33%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSRAAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQT+ GRSRAA+STAD GAP  HRV++DDVL+RALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVSGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIQSEEEKERFELPAE-GGDEMAVEEVIGEMKEERKRNELLREAFKIFDV 120
           KAKGVVEKLGLI+SEEEKE FELPA+ GGDE+AVEEVIGEM+EE KRNELL EAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

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BLAST of Tan0021146 vs. NCBI nr
Match: XP_023002517.1 (calmodulin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSRAAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQT+GGRSRAA+S AD GAP   RV++DDVL+RALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSAADGGAPSPCRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIQSEEEKERFELPAE-GGDEMAVEEVIGEMKEERKRNELLREAFKIFDV 120
           KAKGVVEKLGLI+SEEEKE FELPA+ GGDE+AVEEVIGEM+EE KRNELL EAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

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BLAST of Tan0021146 vs. NCBI nr
Match: XP_038886166.1 (calmodulin-like protein 2 [Benincasa hispida])

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-75
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSR-AAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKK 60
           MGISRFIGDFLQT GGRSR AAEST DDG    HR+VYDDVL+RALITVFGMRENGRIKK
Sbjct: 1   MGISRFIGDFLQTFGGRSRSAAESTIDDGKTRPHRMVYDDVLLRALITVFGMRENGRIKK 60

Query: 61  EKAKGVVEKLGLIQSEEEKERFEL--PAEGGDEMAVEEVIGEMKEERKRNELLREAFKIF 120
           EKAKGVVEKLGLIQSEEEK RFEL   AEGGDE+AVEEVIGE  EE KRNELL EAFKIF
Sbjct: 61  EKAKGVVEKLGLIQSEEEKARFELATAAEGGDEVAVEEVIGE--EEGKRNELLYEAFKIF 120

Query: 121 DVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKC 177
           DVDGDGFIDTVELKRVL+CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKC
Sbjct: 121 DVDGDGFIDTVELKRVLDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 177

[Close]

BLAST of Tan0021146 vs. NCBI nr
Match: XP_008445056.1 (PREDICTED: calmodulin-like protein 7 [Cucumis melo] >KAA0065018.1 calmodulin-like protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 2.0e-70
Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSR-AAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKK 60
           MGISRFIGDFLQTLGGRSR AAEST D G    +R+VYDDVL+RALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAAESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIQSEEEKERFELPA-EGGDEMAVEEVIGEMKEERKRNELLREAFKIFD 120
           EKAKGVVEKLGLI   EEKE+FEL A EGGDE+AVEEVIGE  EE KRNELL EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEVIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Tan0021146 vs. ExPASy TrEMBL
Match: A0A6J1GHP6 (calmodulin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111454254 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 160/178 (89.89%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSRAAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQT+GGRSRAA+STAD GAP  HRV++DDVL+RALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSTADGGAPSPHRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIQSEEEKERFELPAE-GGDEMAVEEVIGEMKEERKRNELLREAFKIFDV 120
           KAKGVVEKLGLI+SEEEKE FELPA+ GGDE+AVEEVIGEM+EE KRNELL EAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Tan0021146 vs. ExPASy TrEMBL
Match: A0A6J1KJR1 (calmodulin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496334 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.7e-79
Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSRAAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKKE 60
           MGISRFIGDFLQT+GGRSRAA+S AD GAP   RV++DDVL+RALITVFGMRENGRIKKE
Sbjct: 1   MGISRFIGDFLQTVGGRSRAADSAADGGAPSPCRVIHDDVLLRALITVFGMRENGRIKKE 60

Query: 61  KAKGVVEKLGLIQSEEEKERFELPAE-GGDEMAVEEVIGEMKEERKRNELLREAFKIFDV 120
           KAKGVVEKLGLI+SEEEKE FELPA+ GGDE+AVEEVIGEM+EE KRNELL EAFKIFDV
Sbjct: 61  KAKGVVEKLGLIKSEEEKEGFELPADGGGDEVAVEEVIGEMEEEGKRNELLWEAFKIFDV 120

Query: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKCS 178
           DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKCS
Sbjct: 121 DGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFGEFELMMGVKCS 178

[Close]

BLAST of Tan0021146 vs. ExPASy TrEMBL
Match: A0A5A7VBM3 (Calmodulin-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003420 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.7e-71
Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSR-AAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKK 60
           MGISRFIGDFLQTLGGRSR AAEST D G    +R+VYDDVL+RALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAAESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIQSEEEKERFELPA-EGGDEMAVEEVIGEMKEERKRNELLREAFKIFD 120
           EKAKGVVEKLGLI   EEKE+FEL A EGGDE+AVEEVIGE  EE KRNELL EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEVIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Tan0021146 vs. ExPASy TrEMBL
Match: A0A1S3BBS0 (calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103488209 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.7e-71
Identity = 151/178 (84.83%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSR-AAESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKK 60
           MGISRFIGDFLQTLGGRSR AAEST D G    +R+VYDDVL+RALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAAESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIQSEEEKERFELPA-EGGDEMAVEEVIGEMKEERKRNELLREAFKIFD 120
           EKAKGVVEKLGLI   EEKE+FEL A EGGDE+AVEEVIGE  EE KRNELL EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEVIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Tan0021146 vs. ExPASy TrEMBL
Match: A0A0A0LP90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376820 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.2e-70
Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 1   MGISRFIGDFLQTLGGRSRAA-ESTADDGAPVTHRVVYDDVLVRALITVFGMRENGRIKK 60
           MGISRFIGDFLQTLGGRSRAA EST D G    +R+VYDDVL+RALITVFGMRENGRIK 
Sbjct: 1   MGISRFIGDFLQTLGGRSRAAVESTIDAGESKPNRMVYDDVLLRALITVFGMRENGRIKT 60

Query: 61  EKAKGVVEKLGLIQSEEEKERFELPA-EGGDEMAVEEVIGEMKEERKRNELLREAFKIFD 120
           EKAKGVVEKLGLI   EEKE+FEL A EGGDE+AVEE+IGE  EE KRNELL EAFKIFD
Sbjct: 61  EKAKGVVEKLGLI---EEKEKFELAAGEGGDEVAVEEMIGE--EEGKRNELLYEAFKIFD 120

Query: 121 VDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQLMMGVKC 177
           VDGDGFIDT+ELKRV++CLGLDKGWGIREIEKMVSVVDVNLDGKVDF EF+LMMGVKC
Sbjct: 121 VDGDGFIDTIELKRVIDCLGLDKGWGIREIEKMVSVVDVNLDGKVDFSEFELMMGVKC 173

[Close]

BLAST of Tan0021146 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 48/130 (36.92%), Postives = 77/130 (59.23%), Query Frame = 0


Query: 48  VFGMRENGRIKKEKAKGVVEKLGLIQSEEEKERF--ELPAEGGDEMAVEE---VIGEMKE 107
           +F    +G+I K + K   + +G++  E E      ++   G   M ++E   +  EM E
Sbjct: 12  MFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVE 71

Query: 108 ERKRNELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGK 167
           E++  E +REAF++FD +GDGFI   EL+ VL  +GL +G  + + +KM+S VDV+ DG 
Sbjct: 72  EKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGM 131

Query: 168 VDFIEFQLMM 173
           V+F EF+ MM
Sbjct: 132 VNFKEFKQMM 141

[Close]

BLAST of Tan0021146 vs. TAIR 10
Match: AT5G44460.1 (calmodulin like 43 )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 110 LREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQ 169
           L EAF +FD DGDGFI  VEL++VL+ LGL +   I ++EKM+  VD N DG+VDF EF+
Sbjct: 112 LEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFK 171

Query: 170 LMM 173
            MM
Sbjct: 172 NMM 174

[Close]

BLAST of Tan0021146 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 38  DDVLVRALITVFGMRENGRIKKEKAKGVVEKLGLIQSEEEKERF--ELPAEGGDEMAVEE 97
           D   +  +  +F    +G+I K++    +E LG+   +++  +   ++   G   + +EE
Sbjct: 2   DQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEE 61

Query: 98  VIG---EMKEERKRNELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMV 157
             G    + EER   E +REAF +FD + DGFI   EL+ VL  LGL +G  + + ++M+
Sbjct: 62  FGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMI 121

Query: 158 SVVDVNLDGKVDFIEFQLMM 173
           S VDV+ DG V+F EF+ MM
Sbjct: 122 SKVDVDGDGMVNFKEFKQMM 141

[Close]

BLAST of Tan0021146 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 38  DDVLVRALITVFGMRENGRIKKEKAKGVVEKLGL-IQSEEEKERFELPAEGGDEMAVEEV 97
           D   ++ +  +F    +G I  ++    +  LG+ I  +E  +  E     GD     + 
Sbjct: 2   DPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDE 61

Query: 98  IGE-----MKEERKRNELLREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKM 157
            GE     M EE +  E ++EAF +FD +GDGFI   ELK VL  LGL +G  + + +KM
Sbjct: 62  FGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKM 121

Query: 158 VSVVDVNLDGKVDFIEFQLMM 173
           +  VDV+ DG+V++ EF+ MM
Sbjct: 122 IKKVDVDGDGRVNYKEFRQMM 142

[Close]

BLAST of Tan0021146 vs. TAIR 10
Match: AT4G20780.1 (calmodulin like 42 )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 110 LREAFKIFDVDGDGFIDTVELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFIEFQ 169
           L EAFK+FD +GDGFI   EL+ VL+ LGL +G  +  +EKM+  VD N DG+VDF EF+
Sbjct: 121 LAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFK 180

Query: 170 LMM 173
            MM
Sbjct: 181 NMM 183

The following BLAST results are available for this feature:

BLAST of Tan0021146 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SU00	2.8e-14	36.92	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]
Q9FI19	1.5e-12	57.14	Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 ...	[more]
Q9SRR7	3.4e-12	33.57	Calmodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CML3 PE=2 SV=1	[more]
Q84UL5	1.3e-11	53.85	Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9SVG9	2.2e-11	55.56	Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1	[more]

BLAST of Tan0021146 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951438.1	2.8e-80	89.89	calmodulin-like protein 2 [Cucurbita moschata] >XP_023537761.1 calmodulin-like p...	[more]
KAG6585405.1	1.4e-79	89.33	putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023002517.1	2.0e-78	88.76	calmodulin-like protein 2 [Cucurbita maxima]	[more]
XP_038886166.1	2.7e-75	88.27	calmodulin-like protein 2 [Benincasa hispida]	[more]
XP_008445056.1	2.0e-70	84.83	PREDICTED: calmodulin-like protein 7 [Cucumis melo] >KAA0065018.1 calmodulin-lik...	[more]

BLAST of Tan0021146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHP6	1.4e-80	89.89	calmodulin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111454254 PE=4 SV=...	[more]
A0A6J1KJR1	9.7e-79	88.76	calmodulin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496334 PE=4 SV=1	[more]
A0A5A7VBM3	9.7e-71	84.83	Calmodulin-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BBS0	9.7e-71	84.83	calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103488209 PE=4 SV=1	[more]
A0A0A0LP90	2.2e-70	84.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376820 PE=4 SV=1	[more]

BLAST of Tan0021146 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12860.1	2.0e-15	36.92	EF hand calcium-binding protein family	[more]
AT5G44460.1	1.1e-13	57.14	calmodulin like 43	[more]
AT3G07490.1	2.4e-13	33.57	ARF-GAP domain 11	[more]
AT1G05990.1	1.6e-12	34.04	EF hand calcium-binding protein family	[more]
AT4G20780.1	1.6e-12	55.56	calmodulin like 42	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..113
None	No IPR available	GENE3D	1.10.238.10		coord: 11..175 e-value: 1.0E-19 score: 73.2
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 103..173
None	No IPR available	PANTHER	PTHR10891:SF743	CALCIUM-BINDING PROTEIN CML42	coord: 103..173
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 109..137 e-value: 5.7E-5 score: 32.5 coord: 147..175 e-value: 2.5 score: 14.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 109..172 e-value: 1.3E-9 score: 38.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 143..177 score: 8.515894
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 105..140 score: 15.378162
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 110..172 e-value: 1.26841E-14 score: 62.9505
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 118..130
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 48..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021146.1	Tan0021146.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding