Tan0021145 (gene) Snake gourd v1

Overview


Name	Tan0021145
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG06: 26395442 .. 26396611 (-)
RNA-Seq Expression	Tan0021145
Synteny	Tan0021145

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACTCCGACGAAGTCCCACAGTCGCCGAATGAAGGGCTCTCAGATGGGTGAGGCGTCGGAAACCCTCATGCAACATTCAAACTTACCCCCGAGGGTTACGCCGCCCAGCTCGGAACAAGAGAAGCCAACAGACAAAGACCTTTTCTCTCTCAAACTGGGGTCAGAGGAGTCGAAGGAGCAACTCCAGAAGCTTGTTGATGACCAGTGGGATTACGAGATGCGAATGAAAAAGTCCTTGACAGTGCAACAACCCTCAGGTTCGAAGAAAGGAAAAAAGCCCTCTGTGCTGGCAGAACCAAAGAGAGGAACAGAGGAATGGCGACACTGGGTAAAGCAGTGGCACGAGGAATGAAAGATTCGCTCAATCGAAAGAACACTCCTCGGAAAAAGCTACGAGTCCAAAGAAGAAGTCGAGGAAGTGGGAGAAAAAACCCATTCGGCTCTACCGAGCAATAAGCCACCCGAGGGTAACATTGAGAGTGTTGCAGGTGGGAAAGAAGAGAAATTGAAGGAACCCAAGCCATATGCGGTGTCCAAATCGGGAAGGAAGAAATTTTTAGCCCGAAAGAATGTGGCCCCGGTACACAGATTGCCAAAAGAGAAGAAGAAGGTAGAACCGGAGGAAGAGAAGAAGACTGAGTCGAAGGAGCCTTATTATGAAGAATGGGCACAACAAGTTGTTGCCCAAGCAAAAGTATTGGCAGAAAAGTTACACAAGGAACATTTAGACAAGGGAGGAAGCACCAAAAGGCCAAGTCGATGGGCCCCAACCGCTTCAGAACAACGAGTGGAGAACGAGGCAGTAAATGAAAGTATAACTGAACCCTCTTTTGAAATGCAATTTGATGAAGATATTGCTGGATTGGAGCCTAGAGATGCTGAAATCTCTAGCCCCCCGTCATCTGAGATGGGGGCTGAAAAGGAAAAGACCGAAAAATAGGGGACATGCTACCCAAATTTTGAAAACGAAGTGGAAGAAGAACTAGGGGACCAAAAGACTGAAATTGAAGAGGAAAAGATAGAAGAAATGCAGGTGGAAGAAAATCAAGATGAAGTGCAGGGGGAGAAGAGGCAGGAAGAAGAGGTTGATGAAGTGCAGGAAGAAGAAATCCAAGAAGAAATTCATGAAGAAGAGGCCCCAAGGGAAGATCCCGAGGAAGAGTAG

mRNA sequence

ATGAAGACTCCGACGAAGTCCCACAGTCGCCGAATGAAGGGCTCTCAGATGGGTGAGGCGTCGGAAACCCTCATGCAACATTCAAACTTACCCCCGAGGGTTACGCCGCCCAGCTCGGAACAAGAGAAGCCAACAGACAAAGACCTTTTCTCTCTCAAACTGGGGTCAGAGGAGTCGAAGGAGCAACTCCAGAAGCTTGTTGATGACCAGTGGGATTACGAGATGCGAATGAAAAAGTCCTTGACAGTGCAACAACCCTCAGGTTCGAAGAAAGGAAAAAAGCCCTCTGTGCTGGCAGAACCAAAGAGAGGAACAGAGGAATGGCGACACTGGCCACCCGAGGGTAACATTGAGAGTGTTGCAGGTGGGAAAGAAGAGAAATTGAAGGAACCCAAGCCATATGCGGTGTCCAAATCGGGAAGGAAGAAATTTTTAGCCCGAAAGAATGTGGCCCCGGTACACAGATTGCCAAAAGAGAAGAAGAAGGTAGAACCGGAGGAAGAGAAGAAGACTGAGTCGAAGGAGCCTTATTATGAAGAATGGGCACAACAAGTTGTTGCCCAAGCAAAAGTATTGGCAGAAAAGTTACACAAGGAACATTTAGACAAGGGAGGAAGCACCAAAAGGCCAAGTCGATGGGCCCCAACCGCTTCAGAACAACGAGTGGAGAACGAGGCAGTAAATGAAAGTATAACTGAACCCTCTTTTGAAATGCAATTTGATGAAGATATTGCTGGATTGGAGCCTAGAGATGGGACATGCTACCCAAATTTTGAAAACGAAGTGGAAGAAGAACTAGGGGACCAAAAGACTGAAATTGAAGAGGAAAAGATAGAAGAAATGCAGGTGGAAGAAAATCAAGATGAAGTGCAGGGGGAGAAGAGGCAGGAAGAAGAGGTTGATGAAGTGCAGGAAGAAGAAATCCAAGAAGAAATTCATGAAGAAGAGGCCCCAAGGGAAGATCCCGAGGAAGAGTAG

Coding sequence (CDS)

ATGAAGACTCCGACGAAGTCCCACAGTCGCCGAATGAAGGGCTCTCAGATGGGTGAGGCGTCGGAAACCCTCATGCAACATTCAAACTTACCCCCGAGGGTTACGCCGCCCAGCTCGGAACAAGAGAAGCCAACAGACAAAGACCTTTTCTCTCTCAAACTGGGGTCAGAGGAGTCGAAGGAGCAACTCCAGAAGCTTGTTGATGACCAGTGGGATTACGAGATGCGAATGAAAAAGTCCTTGACAGTGCAACAACCCTCAGGTTCGAAGAAAGGAAAAAAGCCCTCTGTGCTGGCAGAACCAAAGAGAGGAACAGAGGAATGGCGACACTGGCCACCCGAGGGTAACATTGAGAGTGTTGCAGGTGGGAAAGAAGAGAAATTGAAGGAACCCAAGCCATATGCGGTGTCCAAATCGGGAAGGAAGAAATTTTTAGCCCGAAAGAATGTGGCCCCGGTACACAGATTGCCAAAAGAGAAGAAGAAGGTAGAACCGGAGGAAGAGAAGAAGACTGAGTCGAAGGAGCCTTATTATGAAGAATGGGCACAACAAGTTGTTGCCCAAGCAAAAGTATTGGCAGAAAAGTTACACAAGGAACATTTAGACAAGGGAGGAAGCACCAAAAGGCCAAGTCGATGGGCCCCAACCGCTTCAGAACAACGAGTGGAGAACGAGGCAGTAAATGAAAGTATAACTGAACCCTCTTTTGAAATGCAATTTGATGAAGATATTGCTGGATTGGAGCCTAGAGATGGGACATGCTACCCAAATTTTGAAAACGAAGTGGAAGAAGAACTAGGGGACCAAAAGACTGAAATTGAAGAGGAAAAGATAGAAGAAATGCAGGTGGAAGAAAATCAAGATGAAGTGCAGGGGGAGAAGAGGCAGGAAGAAGAGGTTGATGAAGTGCAGGAAGAAGAAATCCAAGAAGAAATTCATGAAGAAGAGGCCCCAAGGGAAGATCCCGAGGAAGAGTAG

Protein sequence

MKTPTKSHSRRMKGSQMGEASETLMQHSNLPPRVTPPSSEQEKPTDKDLFSLKLGSEESKEQLQKLVDDQWDYEMRMKKSLTVQQPSGSKKGKKPSVLAEPKRGTEEWRHWPPEGNIESVAGGKEEKLKEPKPYAVSKSGRKKFLARKNVAPVHRLPKEKKKVEPEEEKKTESKEPYYEEWAQQVVAQAKVLAEKLHKEHLDKGGSTKRPSRWAPTASEQRVENEAVNESITEPSFEMQFDEDIAGLEPRDGTCYPNFENEVEEELGDQKTEIEEEKIEEMQVEENQDEVQGEKRQEEEVDEVQEEEIQEEIHEEEAPREDPEEE

Homology

The following BLAST results are available for this feature:

BLAST of Tan0021145 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021145 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021145 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021145 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 259..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021145.1	Tan0021145.1	mRNA