Tan0020954 (gene) Snake gourd v1

Overview


Name	Tan0020954
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Poly(A)-specific ribonuclease
Location	LG05: 10386646 .. 10387574 (-)
RNA-Seq Expression	Tan0020954
Synteny	Tan0020954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAAGAAAGTGTTTGATTCGAGAAGTTTGGGCTTTGAATTTCGATTACGAAATCTCGAAGCTGGATACATGTCTTGAATTAAACCCTATTTTGTCCATTGACACAGAATTCCCAGGATGTATTAGGAGCAGTCCTGGGGGATCGATTGATAAACAAGTGTACGGACATCTTCGATTCAATGTGAACCAAACGAAGTTGATTCAACTAGGTTTAACAGCTTCTAATGAATTAGGGAAAATTGGCGGCTCATGGGAGTTCAACTTCTCTGACTTCGACTCTGAATTGGACGCCCACAATCCTTCATCGATTTCGTTTCTGAAACAGAATGGACTCGATTTTGAGAAACTGAAGAAAGATGGAATCCCGGTGAGAGTATTCACTATGAATATCGGTGATGTGTTGGGAAAGAATAAGATCTTCAGATGGGTCACATTTCACGGATTATACGACATTGGGTATGTAAAAATAAACACAAACTCAAGAACTTGATTATTGGATCGGTGGTTTGCTTCAATTTTTGGTTTTTTGTTGTCAACAGATATCTTGTGAAGGCGATTGGCTTAGTTGAGTACTTGCCAGAATCAGTAGAAGAATTTGCACAGGTAGTGAGTGCAATGGGGCTTGTGAGAGATTTGAAGCATATGGCTCGATTCTGTCAAGAGTTGGAAGATGGGAAACTAGGGCTTGAAAGACTTGGCCAATTATTAGGCCAAAAGCGGTTTGGAAAAAAACACCATGCTGGTTCTGACAGCTTCTTAACTGCTTCTTTACATACAAAGATGATAGAATGTTATGGCTTGAATTCAGAAATTTGTGACGGGTATTTGTACGGCCTCTCCGACAAACTCTGGATCCATATGAAAAATAAAATCTATCATCACATTATGATTTGCTCAAATTTTGTATTCTATGTCCCTTTATGA

mRNA sequence

ATGGGTAGAAGAAAGTGTTTGATTCGAGAAGTTTGGGCTTTGAATTTCGATTACGAAATCTCGAAGCTGGATACATGTCTTGAATTAAACCCTATTTTGTCCATTGACACAGAATTCCCAGGATGTATTAGGAGCAGTCCTGGGGGATCGATTGATAAACAAGTGTACGGACATCTTCGATTCAATGTGAACCAAACGAAGTTGATTCAACTAGGTTTAACAGCTTCTAATGAATTAGGGAAAATTGGCGGCTCATGGGAGTTCAACTTCTCTGACTTCGACTCTGAATTGGACGCCCACAATCCTTCATCGATTTCGTTTCTGAAACAGAATGGACTCGATTTTGAGAAACTGAAGAAAGATGGAATCCCGGTGAGAGTATTCACTATGAATATCGGTGATGTGTTGGGAAAGAATAAGATCTTCAGATGGGTCACATTTCACGGATTATACGACATTGGATATCTTGTGAAGGCGATTGGCTTAGTTGAGTACTTGCCAGAATCAGTAGAAGAATTTGCACAGGTAGTGAGTGCAATGGGGCTTGTGAGAGATTTGAAGCATATGGCTCGATTCTGTCAAGAGTTGGAAGATGGGAAACTAGGGCTTGAAAGACTTGGCCAATTATTAGGCCAAAAGCGGTTTGGAAAAAAACACCATGCTGGTTCTGACAGCTTCTTAACTGCTTCTTTACATACAAAGATGATAGAATGTTATGGCTTGAATTCAGAAATTTGTGACGGGTATTTGTACGGCCTCTCCGACAAACTCTGGATCCATATGAAAAATAAAATCTATCATCACATTATGATTTGCTCAAATTTTGTATTCTATGTCCCTTTATGA

Coding sequence (CDS)

ATGGGTAGAAGAAAGTGTTTGATTCGAGAAGTTTGGGCTTTGAATTTCGATTACGAAATCTCGAAGCTGGATACATGTCTTGAATTAAACCCTATTTTGTCCATTGACACAGAATTCCCAGGATGTATTAGGAGCAGTCCTGGGGGATCGATTGATAAACAAGTGTACGGACATCTTCGATTCAATGTGAACCAAACGAAGTTGATTCAACTAGGTTTAACAGCTTCTAATGAATTAGGGAAAATTGGCGGCTCATGGGAGTTCAACTTCTCTGACTTCGACTCTGAATTGGACGCCCACAATCCTTCATCGATTTCGTTTCTGAAACAGAATGGACTCGATTTTGAGAAACTGAAGAAAGATGGAATCCCGGTGAGAGTATTCACTATGAATATCGGTGATGTGTTGGGAAAGAATAAGATCTTCAGATGGGTCACATTTCACGGATTATACGACATTGGATATCTTGTGAAGGCGATTGGCTTAGTTGAGTACTTGCCAGAATCAGTAGAAGAATTTGCACAGGTAGTGAGTGCAATGGGGCTTGTGAGAGATTTGAAGCATATGGCTCGATTCTGTCAAGAGTTGGAAGATGGGAAACTAGGGCTTGAAAGACTTGGCCAATTATTAGGCCAAAAGCGGTTTGGAAAAAAACACCATGCTGGTTCTGACAGCTTCTTAACTGCTTCTTTACATACAAAGATGATAGAATGTTATGGCTTGAATTCAGAAATTTGTGACGGGTATTTGTACGGCCTCTCCGACAAACTCTGGATCCATATGAAAAATAAAATCTATCATCACATTATGATTTGCTCAAATTTTGTATTCTATGTCCCTTTATGA

Protein sequence

MGRRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAMGLVRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGLNSEICDGYLYGLSDKLWIHMKNKIYHHIMICSNFVFYVPL

Homology

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BLAST of Tan0020954 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.7e-43
Identity = 99/231 (42.86%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 10  EVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLI 69
           EVW  N   E++ +  CL+    ++IDTEFPGC++ +P  + D+  Y  ++FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 70  QLGLTASNELGK-IGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVF 129
           QLGLT     GK I  +WE N SDF+      N  SI+FLK NGLD +K++++GI +  F
Sbjct: 64  QLGLTL---FGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEF 123

Query: 130 TMNIGDVLG-KNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAM--GLVRD 189
            M    +L  K+   RWVTF G YD  YL+K +   + LPE+ +EF + V  +    V D
Sbjct: 124 FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYD 183

Query: 190 LKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMI 237
           +K MA  C  L   + GL+R+  +L  +R GK HHAGSDS LTA + TK+I
Sbjct: 184 VKKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]

BLAST of Tan0020954 vs. ExPASy Swiss-Prot
Match: Q9SHJ0 (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.5e-42
Identity = 100/250 (40.00%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 7   LIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQT 66
           L R VW  N D E++++  CL+  P+++ DTE+PG I  +   S   + Y  ++ NV  T
Sbjct: 8   LARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENT 67

Query: 67  KLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPV- 126
           KLIQ G T  N  G+IGG WE NFS+F    D  N  SI FL+++GLD +K++ +G+ + 
Sbjct: 68  KLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMF 127

Query: 127 -RVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFA-QVVSAMGLV 186
              F   +  V    K   +VTF G YD  Y +  +   + LPE+  EFA +VV   G V
Sbjct: 128 GYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGK-LPETHGEFATEVVKVFGQV 187

Query: 187 RDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGLNS 246
            D K MA FC+ L +  LGL +L QLL   R G+ HHAGSDS +TA +  K+   Y  +S
Sbjct: 188 YDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE-DS 247

Query: 247 EICDGYLYGL 254
               G +YG+
Sbjct: 248 RFARGLIYGI 254

[Close]

BLAST of Tan0020954 vs. ExPASy Swiss-Prot
Match: Q9SFX6 (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.4e-41
Identity = 93/229 (40.61%), Postives = 135/229 (58.95%), Query Frame = 0


Query: 10  EVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLI 69
           EVW  N + E++ +  CL+    ++IDTEFPGC++ +P  + ++  Y  ++FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 70  QLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFT 129
           QLG T  +  G    +WE N SDFD      N  SI+FLK NGL+ +K++++GI +  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 130 MNIGDVL-GKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAM--GLVRDL 189
            +   +L  K+    WV F G YD  YLVK +   + LPE+ EEF + V  +    V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 190 KHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKM 236
           K +A  C  L   + GL+R+  +L  KR GK HHAGSDS LTA + TK+
Sbjct: 188 KKIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 234

[Close]

BLAST of Tan0020954 vs. ExPASy Swiss-Prot
Match: Q9C6M9 (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.6e-40
Identity = 93/229 (40.61%), Postives = 134/229 (58.52%), Query Frame = 0


Query: 10  EVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLI 69
           EVW  N + E+  +  CL+    ++IDTEFPGC++ +P  + ++  Y  ++FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 70  QLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFT 129
           QLG T  +  G I  +WE N SDF+      N  SI+FLK NGL+ +K+ ++GI +  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 130 MNIGDVL-GKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAM--GLVRDL 189
            +   +L  K+    WV F G YD  YLVK +   + LPE+ EEF + V  +    V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 190 KHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKM 236
           K +A  C  L   + GL+R+  +L  KR GK HHAGSDS LTA + TK+
Sbjct: 183 KKIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229

[Close]

BLAST of Tan0020954 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-39
Identity = 95/224 (42.41%), Postives = 137/224 (61.16%), Query Frame = 0


Query: 20  ISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLIQLGLTASNEL 79
           +S ++ CL     ++IDTEFP  +R +   + D++ Y  + F+V++ KLIQLGLT  +  
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 80  GKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFTMNIGDVLGK- 139
           G+IGG+WE NFSDF  + DA N  SI FL++NGLD  K++++GI +  F   +  +L K 
Sbjct: 61  GRIGGTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKT 120

Query: 140 NKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMGLVRDLKHMARFCQELE 199
            +   WVTFHG YDI YL+K     E LP + E F++ V+  +G V DLK MA  C+ L 
Sbjct: 121 RRNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL- 180

Query: 200 DGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
             +LGLE L    G  R G  HHAGS++ LTA +  K++  + L
Sbjct: 181 SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

[Close]

BLAST of Tan0020954 vs. NCBI nr
Match: XP_038895744.1 (putative CCR4-associated factor 1 homolog 8 [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 3.1e-97
Identity = 182/282 (64.54%), Postives = 223/282 (79.08%), Query Frame = 0


Query: 4   RKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNV 63
           RK LI +VWA NFD EISKL+ CLE + I+SIDTEFPG IR+SP GSID+ +Y   RFNV
Sbjct: 7   RKSLIHKVWASNFDAEISKLEECLEFHTIVSIDTEFPGFIRNSPWGSIDETLYEDFRFNV 66

Query: 64  NQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGI 123
           NQTKLIQLGLTA ++ GKIGGSWEFNFSDFD E+DA +PSS SFL+QNGLDF KLKK GI
Sbjct: 67  NQTKLIQLGLTACDDSGKIGGSWEFNFSDFDPEIDAQSPSSASFLEQNGLDFNKLKKYGI 126

Query: 124 PVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQ-VVSAMGL 183
           P+ +FT     ++ K+ +FRWVTFHGLYDIGYL+KA+G+ E LPE++EEFA  VV  +G+
Sbjct: 127 PINLFTAKFVHIIRKHNVFRWVTFHGLYDIGYLIKAMGITEVLPETMEEFATVVVRRLGI 186

Query: 184 VRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGLN 243
           VRDLKHMARFC+ LEDGKLGLERLG+LL QKR+G KH+AGSDS LTAS H +MI+ + ++
Sbjct: 187 VRDLKHMARFCEGLEDGKLGLERLGKLLDQKRYGLKHNAGSDSLLTASAHFEMIQRFDMD 246

Query: 244 SEICDGYLYGLSDKLW---IHMKNKIYHHIMICSNFVFYVPL 282
           +EICDGYLYG S+KL    I+M N  +  I+      + +PL
Sbjct: 247 AEICDGYLYGFSNKLQSMDINM-NMFHRKIITFGQIPYAIPL 287

[Close]

BLAST of Tan0020954 vs. NCBI nr
Match: XP_022947867.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 8.3e-95
Identity = 174/280 (62.14%), Postives = 224/280 (80.00%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           RR   I+EVWA NFD+EI +L+ CL+ N ILSIDTEFPGCIRS+P GSID++VY  LRFN
Sbjct: 11  RRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VNQTKLIQLGLTAS+E G++ GSWEFNFSDFD ++D  NPSSI+FL+QNGLDF KLKK G
Sbjct: 71  VNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNGLDFAKLKKQG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMG 182
           IP+ +FT+N   ++ ++++ +WVTFHGLYDIGYLVKA+G+ E LPES+EEFA++V+  +G
Sbjct: 131 IPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG 190

Query: 183 LVRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
           +VRDLK +AR+C+ LE G++GLERLG+LLG+KRFG KHHAGSDS LTA +H KM   + L
Sbjct: 191 VVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRL 250

Query: 243 NSEICDGYLYGLSDKLWIHMKNKIYHHIMICSNFVFYVPL 282
            SE  DG+LYGL +KL    + +   H+   ++F+F V L
Sbjct: 251 ESEAYDGHLYGLRNKLQYMNEGESEDHVW--TDFLFTVGL 288

[Close]

BLAST of Tan0020954 vs. NCBI nr
Match: KAG6604931.1 (putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027010.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-94
Identity = 172/261 (65.90%), Postives = 215/261 (82.38%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           RR   I+EVWA NFD+EI +L+ CL+ N ILSIDTEFPGCIRS+P GSID++VY  LRFN
Sbjct: 11  RRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VNQTKLIQLGLTAS+E G++ GSWEFNFSDFD ++D  NPSSISFL+QNGLDF KLKK G
Sbjct: 71  VNQTKLIQLGLTASDESGQVVGSWEFNFSDFDHQIDTQNPSSISFLEQNGLDFAKLKKQG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMG 182
           IP+ +FT+N   ++ ++++ +WVTFHGLYDIGYLVKA+G+ E LPES+EEFA++V+  +G
Sbjct: 131 IPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG 190

Query: 183 LVRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
           +VRDLK +AR+C+ LE G++GLERLG+LLG+KRFG KHHAGSDS LTA +H KM   + L
Sbjct: 191 VVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRL 250

Query: 243 NSEICDGYLYGLSDKLWIHMK 263
            S   DG+LYGL +KL  HMK
Sbjct: 251 ESGAYDGHLYGLQNKL-EHMK 270

[Close]

BLAST of Tan0020954 vs. NCBI nr
Match: XP_031736916.1 (putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_006644 [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 2.7e-93
Identity = 175/283 (61.84%), Postives = 220/283 (77.74%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           R K LIR+VWA NFD EI++ D CL  + IL+IDTEFPG I  SP GSID ++Y    FN
Sbjct: 11  REKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VNQTKLIQLG+TAS++LG+IGGSWEFNFSDFD E DAH+P +I FL+ NGLD +K+KKDG
Sbjct: 71  VNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQ-VVSAMG 182
           IP+  FT     +L K  IFRWVTFHGLYDIGYL+KA+GL+  LP+S+EEFA  VV+ +G
Sbjct: 131 IPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 190

Query: 183 LVRDLKHMARFCQELED-GKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYG 242
           +VRDLKHMA+FC+ L+D G+LGLERLG+LL  KRFG KH+AGSDS LTAS H +M+E +G
Sbjct: 191 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 250

Query: 243 LNSEICDGYLYGLSDKL---WIHMKNKIYHHIMICSNFVFYVP 281
           +NS++C+G+LYG S+ L    + MK KI HH ++   F  Y+P
Sbjct: 251 MNSKVCNGFLYGFSETLESMKMKMKMKICHHNIL--RFSLYIP 291

[Close]

BLAST of Tan0020954 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 351.7 bits (901), Expect = 6.0e-93
Identity = 170/269 (63.20%), Postives = 213/269 (79.18%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           R    IREVW+ NFD E++ L+ CL L PIL+IDTEFPG IRS+P G+I++++Y   RFN
Sbjct: 11  RGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VN+TKLIQLGLTAS+E+G IG +WEFNFSDFD ++D HN SS+SFLKQNGLDF+KLK+ G
Sbjct: 71  VNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMG 182
           IP+  FT     +  K++I RWVTFHGLYDIGYL+KA+G+   +PES+EEFA++V  A+G
Sbjct: 131 IPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALG 190

Query: 183 LVRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
            V DLKHMA+FC+ LEDGKLGLE+L QL+ QKRFG KHHAGSDS LTASL+ KM   + L
Sbjct: 191 NVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFEL 250

Query: 243 NSEICDGYLYGLSDKLWIHMKNKIYHHIM 271
            SE+CDG+LYGL  KL  H K K+Y ++M
Sbjct: 251 GSEVCDGFLYGLRIKL--HAKIKLYQNLM 277

[Close]

BLAST of Tan0020954 vs. ExPASy TrEMBL
Match: A0A6J1G7L2 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451625 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 4.0e-95
Identity = 174/280 (62.14%), Postives = 224/280 (80.00%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           RR   I+EVWA NFD+EI +L+ CL+ N ILSIDTEFPGCIRS+P GSID++VY  LRFN
Sbjct: 11  RRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VNQTKLIQLGLTAS+E G++ GSWEFNFSDFD ++D  NPSSI+FL+QNGLDF KLKK G
Sbjct: 71  VNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNGLDFAKLKKQG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMG 182
           IP+ +FT+N   ++ ++++ +WVTFHGLYDIGYLVKA+G+ E LPES+EEFA++V+  +G
Sbjct: 131 IPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG 190

Query: 183 LVRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
           +VRDLK +AR+C+ LE G++GLERLG+LLG+KRFG KHHAGSDS LTA +H KM   + L
Sbjct: 191 VVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRL 250

Query: 243 NSEICDGYLYGLSDKLWIHMKNKIYHHIMICSNFVFYVPL 282
            SE  DG+LYGL +KL    + +   H+   ++F+F V L
Sbjct: 251 ESEAYDGHLYGLRNKLQYMNEGESEDHVW--TDFLFTVGL 288

[Close]

BLAST of Tan0020954 vs. ExPASy TrEMBL
Match: A0A0A0LPP0 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93
Identity = 175/283 (61.84%), Postives = 220/283 (77.74%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           R K LIR+VWA NFD EI++ D CL  + IL+IDTEFPG I  SP GSID ++Y    FN
Sbjct: 11  REKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VNQTKLIQLG+TAS++LG+IGGSWEFNFSDFD E DAH+P +I FL+ NGLD +K+KKDG
Sbjct: 71  VNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQ-VVSAMG 182
           IP+  FT     +L K  IFRWVTFHGLYDIGYL+KA+GL+  LP+S+EEFA  VV+ +G
Sbjct: 131 IPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 190

Query: 183 LVRDLKHMARFCQELED-GKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYG 242
           +VRDLKHMA+FC+ L+D G+LGLERLG+LL  KRFG KH+AGSDS LTAS H +M+E +G
Sbjct: 191 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 250

Query: 243 LNSEICDGYLYGLSDKL---WIHMKNKIYHHIMICSNFVFYVP 281
           +NS++C+G+LYG S+ L    + MK KI HH ++   F  Y+P
Sbjct: 251 MNSKVCNGFLYGFSETLESMKMKMKMKICHHNIL--RFSLYIP 291

[Close]

BLAST of Tan0020954 vs. ExPASy TrEMBL
Match: A0A6J1CXP9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.9e-93
Identity = 170/269 (63.20%), Postives = 213/269 (79.18%), Query Frame = 0


Query: 3   RRKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFN 62
           R    IREVW+ NFD E++ L+ CL L PIL+IDTEFPG IRS+P G+I++++Y   RFN
Sbjct: 11  RGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIEEKLYDDFRFN 70

Query: 63  VNQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDG 122
           VN+TKLIQLGLTAS+E+G IG +WEFNFSDFD ++D HN SS+SFLKQNGLDF+KLK+ G
Sbjct: 71  VNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNGLDFDKLKEFG 130

Query: 123 IPVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMG 182
           IP+  FT     +  K++I RWVTFHGLYDIGYL+KA+G+   +PES+EEFA++V  A+G
Sbjct: 131 IPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEEFAELVERALG 190

Query: 183 LVRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
            V DLKHMA+FC+ LEDGKLGLE+L QL+ QKRFG KHHAGSDS LTASL+ KM   + L
Sbjct: 191 NVSDLKHMAQFCEGLEDGKLGLEKLAQLMNQKRFGNKHHAGSDSLLTASLYAKMKNQFEL 250

Query: 243 NSEICDGYLYGLSDKLWIHMKNKIYHHIM 271
            SE+CDG+LYGL  KL  H K K+Y ++M
Sbjct: 251 GSEVCDGFLYGLRIKL--HAKIKLYQNLM 277

[Close]

BLAST of Tan0020954 vs. ExPASy TrEMBL
Match: A0A5A7TRG1 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001200 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 8.4e-93
Identity = 166/266 (62.41%), Postives = 214/266 (80.45%), Query Frame = 0


Query: 4   RKCLIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNV 63
           +K  IR+VWA NF+ EI++ D CL  + IL+IDTEFPG I  SP  SID+++Y + RFNV
Sbjct: 13  KKPFIRQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNV 72

Query: 64  NQTKLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGI 123
           NQ KLIQLG+TASN+ G+IGGSWEFNFSDFD ++D+H+PS+I FL++NGLDF+KLKK GI
Sbjct: 73  NQMKLIQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKNGLDFKKLKKYGI 132

Query: 124 PVRVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQ-VVSAMGL 183
           P+  FT     ++ K  IFRWVTFHGLYDIGYL+KA+GL+  LP+S+EEFA  VV+ +G+
Sbjct: 133 PIASFTKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATLVVNEVGI 192

Query: 184 VRDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGLN 243
           VRDLKHMARFC+ LEDG+LGLERLG++L +KRFG KH+AGSDS LTAS H +M++ +G+ 
Sbjct: 193 VRDLKHMARFCEGLEDGRLGLERLGKILNKKRFGMKHNAGSDSLLTASAHFEMVKRFGMT 252

Query: 244 SEICDGYLYGLSDKLWIHMKNKIYHH 269
            E+C+G+LYG S+ L   MK  IYHH
Sbjct: 253 YEVCNGFLYGFSESL-ESMKMIIYHH 277

[Close]

BLAST of Tan0020954 vs. ExPASy TrEMBL
Match: A0A6J1G7T4 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451626 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 8.4e-93
Identity = 167/251 (66.53%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 7   LIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQT 66
           LIREVWA N D+EI +LD CL    I+SIDTEFPGCI+ +P G+ D+++Y   RFNVNQT
Sbjct: 14  LIREVWAYNLDHEIIRLDRCLLSYSIMSIDTEFPGCIKRTPWGTFDEELYADFRFNVNQT 73

Query: 67  KLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVR 126
           K+IQLG+T S+E G IGG+WEFNFSDFD E+DAHNP+SI FLKQNGLDF KLKKDGI VR
Sbjct: 74  KVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDGIKVR 133

Query: 127 VFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMGLVRD 186
            F +     LGK+ I+RWVTFHGLYDIGYL+ A+G+V+ LPE++ EF  +V+  +G VRD
Sbjct: 134 KFAIRFLYTLGKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFKWIVARRVGTVRD 193

Query: 187 LKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGLNSEI 246
           LKHMARFC+ LE G LGLE+LGQLL QKRFG KHHAGSDS +TA LH KM++ Y  ++EI
Sbjct: 194 LKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDFHAEI 253

Query: 247 CDGYLYGLSDK 257
           CDG+LYGLS K
Sbjct: 254 CDGFLYGLSKK 264

[Close]

BLAST of Tan0020954 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 5.5e-44
Identity = 99/231 (42.86%), Postives = 139/231 (60.17%), Query Frame = 0


Query: 10  EVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLI 69
           EVW  N   E++ +  CL+    ++IDTEFPGC++ +P  + D+  Y  ++FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 70  QLGLTASNELGK-IGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVF 129
           QLGLT     GK I  +WE N SDF+      N  SI+FLK NGLD +K++++GI +  F
Sbjct: 64  QLGLTL---FGKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEF 123

Query: 130 TMNIGDVLG-KNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAM--GLVRD 189
            M    +L  K+   RWVTF G YD  YL+K +   + LPE+ +EF + V  +    V D
Sbjct: 124 FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYD 183

Query: 190 LKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMI 237
           +K MA  C  L   + GL+R+  +L  +R GK HHAGSDS LTA + TK+I
Sbjct: 184 VKKMAGLCSGL-SSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]

BLAST of Tan0020954 vs. TAIR 10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 4.6e-43
Identity = 100/250 (40.00%), Postives = 141/250 (56.40%), Query Frame = 0


Query: 7   LIREVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQT 66
           L R VW  N D E++++  CL+  P+++ DTE+PG I  +   S   + Y  ++ NV  T
Sbjct: 8   LARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENT 67

Query: 67  KLIQLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPV- 126
           KLIQ G T  N  G+IGG WE NFS+F    D  N  SI FL+++GLD +K++ +G+ + 
Sbjct: 68  KLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMF 127

Query: 127 -RVFTMNIGDVLGKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFA-QVVSAMGLV 186
              F   +  V    K   +VTF G YD  Y +  +   + LPE+  EFA +VV   G V
Sbjct: 128 GYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGK-LPETHGEFATEVVKVFGQV 187

Query: 187 RDLKHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGLNS 246
            D K MA FC+ L +  LGL +L QLL   R G+ HHAGSDS +TA +  K+   Y  +S
Sbjct: 188 YDTKVMAGFCEGLGE-HLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE-DS 247

Query: 247 EICDGYLYGL 254
               G +YG+
Sbjct: 248 RFARGLIYGI 254

[Close]

BLAST of Tan0020954 vs. TAIR 10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 6.7e-42
Identity = 93/229 (40.61%), Postives = 135/229 (58.95%), Query Frame = 0


Query: 10  EVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLI 69
           EVW  N + E++ +  CL+    ++IDTEFPGC++ +P  + ++  Y  ++FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 70  QLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFT 129
           QLG T  +  G    +WE N SDFD      N  SI+FLK NGL+ +K++++GI +  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 130 MNIGDVL-GKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAM--GLVRDL 189
            +   +L  K+    WV F G YD  YLVK +   + LPE+ EEF + V  +    V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 190 KHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKM 236
           K +A  C  L   + GL+R+  +L  KR GK HHAGSDS LTA + TK+
Sbjct: 188 KKIAESCSGL-SSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 234

[Close]

BLAST of Tan0020954 vs. TAIR 10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41
Identity = 93/229 (40.61%), Postives = 134/229 (58.52%), Query Frame = 0


Query: 10  EVWALNFDYEISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLI 69
           EVW  N + E+  +  CL+    ++IDTEFPGC++ +P  + ++  Y  ++FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 70  QLGLTASNELGKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFT 129
           QLG T  +  G I  +WE N SDF+      N  SI+FLK NGL+ +K+ ++GI +  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 130 MNIGDVL-GKNKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVSAM--GLVRDL 189
            +   +L  K+    WV F G YD  YLVK +   + LPE+ EEF + V  +    V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 190 KHMARFCQELEDGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKM 236
           K +A  C  L   + GL+R+  +L  KR GK HHAGSDS LTA + TK+
Sbjct: 183 KKIAESCSGL-SSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229

[Close]

BLAST of Tan0020954 vs. TAIR 10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 7.4e-41
Identity = 95/224 (42.41%), Postives = 137/224 (61.16%), Query Frame = 0


Query: 20  ISKLDTCLELNPILSIDTEFPGCIRSSPGGSIDKQVYGHLRFNVNQTKLIQLGLTASNEL 79
           +S ++ CL     ++IDTEFP  +R +   + D++ Y  + F+V++ KLIQLGLT  +  
Sbjct: 1   MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDIN 60

Query: 80  GKIGGSWEFNFSDFDSELDAHNPSSISFLKQNGLDFEKLKKDGIPVRVFTMNIGDVLGK- 139
           G+IGG+WE NFSDF  + DA N  SI FL++NGLD  K++++GI +  F   +  +L K 
Sbjct: 61  GRIGGTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKT 120

Query: 140 NKIFRWVTFHGLYDIGYLVKAIGLVEYLPESVEEFAQVVS-AMGLVRDLKHMARFCQELE 199
            +   WVTFHG YDI YL+K     E LP + E F++ V+  +G V DLK MA  C+ L 
Sbjct: 121 RRNITWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGL- 180

Query: 200 DGKLGLERLGQLLGQKRFGKKHHAGSDSFLTASLHTKMIECYGL 242
             +LGLE L    G  R G  HHAGS++ LTA +  K++  + L
Sbjct: 181 SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPFPL 221

The following BLAST results are available for this feature:

BLAST of Tan0020954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64773	7.7e-43	42.86	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SHJ0	6.5e-42	40.00	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SFX6	9.4e-41	40.61	Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9C6M9	3.6e-40	40.61	Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM4	1.0e-39	42.41	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Tan0020954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895744.1	3.1e-97	64.54	putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]	[more]
XP_022947867.1	8.3e-95	62.14	putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]	[more]
KAG6604931.1	2.4e-94	65.90	putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp....	[more]
XP_031736916.1	2.7e-93	61.84	putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypoth...	[more]
XP_022146113.1	6.0e-93	63.20	putative CCR4-associated factor 1 homolog 8 [Momordica charantia]	[more]

BLAST of Tan0020954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7L2	4.0e-95	62.14	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451625 PE=3...	[more]
A0A0A0LPP0	1.3e-93	61.84	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=3 SV...	[more]
A0A6J1CXP9	2.9e-93	63.20	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111015407 PE=...	[more]
A0A5A7TRG1	8.4e-93	62.41	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1G7T4	8.4e-93	66.53	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111451626 PE=3...	[more]

BLAST of Tan0020954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61470.1	5.5e-44	42.86	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G06450.1	4.6e-43	40.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27820.1	6.7e-42	40.61	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	2.5e-41	40.61	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44240.1	7.4e-41	42.41	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..257 e-value: 2.7E-63 score: 215.6
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 13..124 e-value: 2.2E-8 score: 33.8
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 6..272
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 6..272
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020954.1	Tan0020954.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity