Tan0020890 (gene) Snake gourd v1

Overview


Name	Tan0020890
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA binding
Location	LG01: 112519679 .. 112521745 (+)
RNA-Seq Expression	Tan0020890
Synteny	Tan0020890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAAGAGCAAGAGTCGCAGCCGCGAAGAAACACCCATTTTCAAATATCAAAACGCCTGTGGAGTTTAGCTGAGGAACATCGCATAAGCAGCAATGGTGGAGTTCTCAAACTCCGATCCAAGTGTTTGGTTAGAAGCTCTCTCTTCTTATCCATCTCAAATCGAAGCCTTAGGCAAGCCCAATTTAGTTTCTCTCGACGAATTTTACCGGAACGAACTCCCTCTTCTTCTCCACAACCGAAACCCTAGCTCTTACATTACTACTTCCGAGCTCTCAAAACTCATGCAGTGGAAGCTCACTCGCGGAAAATGGAGGTGCACAGTGCTCTGTGTCTCTCTCTTTTCATTTAGATTTCAACGATTGCTTATCAATTTTATCGACACTGATTTTACGGATTTCAGGCCGCGTCTCCTGGACTTCGTTTCATCATTGGACGAATCGCTCGTCAAATCGGCCTCTCAGAAGGCCTTTCAATGCCTTCCTGATATTTCCAAAGCTGTGTCTGAGCTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTGGCTGCTTACGCGCCGGATGTTGCGCCTTTTATGTCCGACGAGGTGAAATCAGGAGAAATGTTGATGCAATTAGATTATCAGTAACCATTGATTTCTGCAATTTGAGTTTTGAATGTCTTAACTTATGATGGCGAAGTAGGCTATGGAGGCGGCTCTTGGAAACTCCAAGGATTATTCGTTGAAGCAGTACTTATCGTTCGCAAATAAGTTGCAAGATAAAGCCAAGGTCCGTTTGTTATGTCTATAATGAAGCCCCTTGCTTTGTTTATTATGTATGGAAGTTTTCATTCTTAGAATCCAAAAGGTTGAGACATTTTTATATTCCCTTCCTTTTAGACATCAAATTCTTTCATTCTTTCTTTCTTGAAATTGACTTTCTGACGAGCCTGGCTCTGTTCCTCAAAACCATTATATGAGTTTAGCATTCTAAATTGAAGCGATGCTTTAAAACTCCGAGTTTAGAAATTTGACTGTGTATAACATTGATAGAGCCAAATCACCAAAGTAAATACTTAAGAAAAGAAAGAAAGGGGACCCAATGATGTAAATACGTAAGAATTATGGGCTGTATTTGTAAGGGTGTGTGCTCGTAGAAATTATTCAATGACGCTGACACAATGTGTGTTAAGGATCTTACATTGAAAAAATGTAGAGAGATCTTACAATTTACAAGAGATGAGTTACTTCTCTCCAATTGATTTTGAGATGAAACCCATGTAATCTAATAATGTGGCTGTATTTTTTGCACCATTGGGTGTATGGTAAAAGTTCTTCATTTTTGTATCCAATGATTATTAAGGTTGTTGTTGAGAGGGGTAGGATATCTTTTTGCATTTTAATGAATTGTAGCTCTTGTTGAGCATTGTGGATATGAAAAGCTCTCAAAGCTCTCTTGGCATTGCCAAAATAGTAAATACATAATTCGAGTTGGATCAACTATGCAATCAGATTATACAATAGAATAAGTTACAAAAGTCCAAACTCGTGTAACATGTGTTTCATCTGTGAATTTACAGTTTTTACAGATCTGTATTTAGCATCATAAAGTCTGGATTTATATATATGGGTTCATGTATTTTGTGAGATTAACAATCTTGGAATTTTGTAATGGACGAACACAGGAGTTAAACATAAGCTCGATTTCTGAATCTTGGAATATACAATTTTTAACTTAAAGTTAAAAATTCTATTGTTCACACGAGGTGGGTTACCAAATTTTACTGGTTTGATTATGGTCATTTGCAGGAATTAAGCTCAGAAGGACAAATTTTCACACCATCTGACGTAGAGAGGGCTTTGTGGAGTACAGCTATAGGGGAAAAATTAAAAGGTTCGCAATCACAATTAGATCCCAAGAATGGAGGCAAAACTGGCGCCAAAAGAAAGAGAAAAACTTGATGTCCGCTGCTTCAAGTGACAGCCCTACTACTGCTTTTGAGTTTTGTACTTCTAGTTTTCGACACGCAGTTTGTTCAGGACACGCGGTTAGGTTTATCCATCTCTATTCCTAAC

mRNA sequence

GCCAAGAGCAAGAGTCGCAGCCGCGAAGAAACACCCATTTTCAAATATCAAAACGCCTGTGGAGTTTAGCTGAGGAACATCGCATAAGCAGCAATGGTGGAGTTCTCAAACTCCGATCCAAGTGTTTGGTTAGAAGCTCTCTCTTCTTATCCATCTCAAATCGAAGCCTTAGGCAAGCCCAATTTAGTTTCTCTCGACGAATTTTACCGGAACGAACTCCCTCTTCTTCTCCACAACCGAAACCCTAGCTCTTACATTACTACTTCCGAGCTCTCAAAACTCATGCAGTGGAAGCTCACTCGCGGAAAATGGAGGCCGCGTCTCCTGGACTTCGTTTCATCATTGGACGAATCGCTCGTCAAATCGGCCTCTCAGAAGGCCTTTCAATGCCTTCCTGATATTTCCAAAGCTGTGTCTGAGCTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTGGCTGCTTACGCGCCGGATGTTGCGCCTTTTATGTCCGACGAGGCTATGGAGGCGGCTCTTGGAAACTCCAAGGATTATTCGTTGAAGCAGTACTTATCGTTCGCAAATAAGTTGCAAGATAAAGCCAAGGAATTAAGCTCAGAAGGACAAATTTTCACACCATCTGACGTAGAGAGGGCTTTGTGGAGTACAGCTATAGGGGAAAAATTAAAAGGTTCGCAATCACAATTAGATCCCAAGAATGGAGGCAAAACTGGCGCCAAAAGAAAGAGAAAAACTTGATGTCCGCTGCTTCAAGTGACAGCCCTACTACTGCTTTTGAGTTTTGTACTTCTAGTTTTCGACACGCAGTTTGTTCAGGACACGCGGTTAGGTTTATCCATCTCTATTCCTAAC

Coding sequence (CDS)

ATGGTGGAGTTCTCAAACTCCGATCCAAGTGTTTGGTTAGAAGCTCTCTCTTCTTATCCATCTCAAATCGAAGCCTTAGGCAAGCCCAATTTAGTTTCTCTCGACGAATTTTACCGGAACGAACTCCCTCTTCTTCTCCACAACCGAAACCCTAGCTCTTACATTACTACTTCCGAGCTCTCAAAACTCATGCAGTGGAAGCTCACTCGCGGAAAATGGAGGCCGCGTCTCCTGGACTTCGTTTCATCATTGGACGAATCGCTCGTCAAATCGGCCTCTCAGAAGGCCTTTCAATGCCTTCCTGATATTTCCAAAGCTGTGTCTGAGCTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCGGTTCTGGCTGCTTACGCGCCGGATGTTGCGCCTTTTATGTCCGACGAGGCTATGGAGGCGGCTCTTGGAAACTCCAAGGATTATTCGTTGAAGCAGTACTTATCGTTCGCAAATAAGTTGCAAGATAAAGCCAAGGAATTAAGCTCAGAAGGACAAATTTTCACACCATCTGACGTAGAGAGGGCTTTGTGGAGTACAGCTATAGGGGAAAAATTAAAAGGTTCGCAATCACAATTAGATCCCAAGAATGGAGGCAAAACTGGCGCCAAAAGAAAGAGAAAAACTTGA

Protein sequence

MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPSDVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT

Homology

[Close]

BLAST of Tan0020890 vs. NCBI nr
Match: KAG6591445.1 (hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 206/218 (94.50%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           MVEFS+SDP +W EALSSYPSQIEALGKPNLVSLD+FYRNELP LLH RNPS YITTSEL
Sbjct: 1   MVEFSHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA KLQDKAKELSSEGQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWSTAIGEK+KGSQSQLDPKNGGKTG+KRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKTGSKRKRKT 218

[Close]

BLAST of Tan0020890 vs. NCBI nr
Match: XP_023536029.1 (uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397.5 bits (1020), Expect = 7.4e-107
Identity = 205/218 (94.04%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           MVEFS+S+P +W EAL SYPSQIEALGKPNLVSLD+FYRNELP LLH RNPS YITTSEL
Sbjct: 1   MVEFSHSEPGLWSEALCSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA KLQDKAKELSSEGQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWSTAIGEK+KGSQSQLDPKNGGKTGAKRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKTGAKRKRKT 218

[Close]

BLAST of Tan0020890 vs. NCBI nr
Match: XP_022977105.1 (uncharacterized protein LOC111477273 [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 3.7e-106
Identity = 203/218 (93.12%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           MVEF++SDP +W EALSSYPSQIEALGKPNLVSLD+FYRNELP LLH RNPS YITTSEL
Sbjct: 1   MVEFAHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRL DFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLFDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL+FA KLQDKAKELSSEGQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLTFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWSTAIGEK+KGSQSQLDPKNGGK GAKRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKAGAKRKRKT 218

[Close]

BLAST of Tan0020890 vs. NCBI nr
Match: XP_022936826.1 (uncharacterized protein LOC111443296 [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 202/217 (93.09%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 2   VEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSELS 61
           +EFS+SDP +W EALSSYPS+IEALGKPNLVSLDEFYRNELP LLH RNPS YITTSELS
Sbjct: 1   MEFSHSDPGLWSEALSSYPSRIEALGKPNLVSLDEFYRNELPPLLHKRNPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPSD 181
           SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA KLQDKAKELSSEGQIFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPSD 180

Query: 182 VERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           VERALWSTAIGEK+KGSQSQL  KNGGKTG+KRKRKT
Sbjct: 181 VERALWSTAIGEKVKGSQSQLGSKNGGKTGSKRKRKT 217

[Close]

BLAST of Tan0020890 vs. NCBI nr
Match: XP_038898858.1 (uncharacterized protein LOC120086335 isoform X1 [Benincasa hispida])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 198/218 (90.83%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           M+EFSNSDP++W EALSSY SQIEALGKPNL SLD+FYRNELP LLH RNP+ YITTSEL
Sbjct: 1   MMEFSNSDPTLWREALSSYSSQIEALGKPNLASLDDFYRNELPRLLHKRNPNPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDI KAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDIFKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEG+IFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGEIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWS AIGEKLKG +S+LDP NGGKTG KRKRKT
Sbjct: 181 DVERALWSRAIGEKLKGPKSELDPNNGGKTGIKRKRKT 218

[Close]

BLAST of Tan0020890 vs. ExPASy TrEMBL
Match: A0A6J1ILC1 (uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.8e-106
Identity = 203/218 (93.12%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           MVEF++SDP +W EALSSYPSQIEALGKPNLVSLD+FYRNELP LLH RNPS YITTSEL
Sbjct: 1   MVEFAHSDPGLWSEALSSYPSQIEALGKPNLVSLDDFYRNELPPLLHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRL DFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLFDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL+FA KLQDKAKELSSEGQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLTFAKKLQDKAKELSSEGQIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWSTAIGEK+KGSQSQLDPKNGGK GAKRKRKT
Sbjct: 181 DVERALWSTAIGEKVKGSQSQLDPKNGGKAGAKRKRKT 218

[Close]

BLAST of Tan0020890 vs. ExPASy TrEMBL
Match: A0A6J1F8K0 (uncharacterized protein LOC111443296 OS=Cucurbita moschata OX=3662 GN=LOC111443296 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105
Identity = 202/217 (93.09%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 2   VEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSELS 61
           +EFS+SDP +W EALSSYPS+IEALGKPNLVSLDEFYRNELP LLH RNPS YITTSELS
Sbjct: 1   MEFSHSDPGLWSEALSSYPSRIEALGKPNLVSLDEFYRNELPPLLHKRNPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPSD 181
           SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA KLQDKAKELSSEGQIFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQIFTPSD 180

Query: 182 VERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           VERALWSTAIGEK+KGSQSQL  KNGGKTG+KRKRKT
Sbjct: 181 VERALWSTAIGEKVKGSQSQLGSKNGGKTGSKRKRKT 217

[Close]

BLAST of Tan0020890 vs. ExPASy TrEMBL
Match: A0A0A0L3W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.0e-103
Identity = 197/218 (90.37%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           M+EFS SDP++W EALS+Y SQIEALGKPNLVSLD+FYRNELPL+LH RNPS YITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FANKL+ KAKELS EG+IFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWS AIGEKLKGS+SQLDP NGGKTG KRKRKT
Sbjct: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKT 218

[Close]

BLAST of Tan0020890 vs. ExPASy TrEMBL
Match: A0A1S3BUF7 (uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493629 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.1e-103
Identity = 196/217 (90.32%), Postives = 205/217 (94.47%), Query Frame = 0


Query: 2   VEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSELS 61
           ++FSNSDP++W EALSSY SQIEALGKPNLVSLD+FYRNELPL+LH R PS YITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPSD 181
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FANKLQ+KAKELS EG+ FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 182 VERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           VERALWS AIGEKLKGSQSQLDP NGGKTG KRKRKT
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKT 217

[Close]

BLAST of Tan0020890 vs. ExPASy TrEMBL
Match: A0A6J1CCK9 (uncharacterized protein LOC111010256 OS=Momordica charantia OX=3673 GN=LOC111010256 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.5e-101
Identity = 197/218 (90.37%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MVEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSEL 60
           MVEF NSDP +W EALSSYPSQIEALGKPNLVSLD FYRNELP LLH RNP+ YITT EL
Sbjct: 1   MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVK ASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPS 180
           ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFAN LQ+KAKELSS+GQIFTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPS 180

Query: 181 DVERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKRKT 219
           DVERALWS+A GEKLK SQSQL+PKNG  +GAKRKRKT
Sbjct: 181 DVERALWSSATGEKLKASQSQLEPKNG--SGAKRKRKT 216

[Close]

BLAST of Tan0020890 vs. TAIR 10
Match: AT3G12210.2 (DNA binding )

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 151/215 (70.23%), Postives = 175/215 (81.40%), Query Frame = 0


Query: 2   VEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSELS 61
           +EF  SD  VW EALSSY S+IE+L KP LVSLD+FYR +LP LLH+R+P+ Y+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VKSAS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANKLQDKAKELSSEGQIFTPSD 181
           SAVLAAYAPD+APFMSDEAME ALGNSKDYSLKQYL FA KLQDKAKEL  +G+   PSD
Sbjct: 123 SAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAKELKLKGEWDGPSD 182

Query: 182 VERALWSTAIGEKLKGSQSQLDPKNGGKTGAKRKR 217
           +ERALWS  +  K +  +S         +G KRKR
Sbjct: 183 IERALWSCTVRAKSQPEKS--------SSGKKRKR 209

[Close]

BLAST of Tan0020890 vs. TAIR 10
Match: AT3G12210.1 (DNA binding )

HSP 1 Score: 211.1 bits (536), Expect = 9.1e-55
Identity = 106/138 (76.81%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 2   VEFSNSDPSVWLEALSSYPSQIEALGKPNLVSLDEFYRNELPLLLHNRNPSSYITTSELS 61
           +EF  SD  VW EALSSY S+IE+L KP LVSLD+FYR +LP LLH+R+P+ Y+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKSASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VKSAS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 122 SAVLAAYAPDVAPFMSDE 140
           SAVLAAYAPD+APFMSDE
Sbjct: 123 SAVLAAYAPDIAPFMSDE 140

The following BLAST results are available for this feature:

BLAST of Tan0020890 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591445.1	1.5e-107	94.50	hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023536029.1	7.4e-107	94.04	uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]	[more]
XP_022977105.1	3.7e-106	93.12	uncharacterized protein LOC111477273 [Cucurbita maxima]	[more]
XP_022936826.1	1.2e-104	93.09	uncharacterized protein LOC111443296 [Cucurbita moschata]	[more]
XP_038898858.1	2.2e-103	90.83	uncharacterized protein LOC120086335 isoform X1 [Benincasa hispida]	[more]

BLAST of Tan0020890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILC1	1.8e-106	93.12	uncharacterized protein LOC111477273 OS=Cucurbita maxima OX=3661 GN=LOC111477273...	[more]
A0A6J1F8K0	5.7e-105	93.09	uncharacterized protein LOC111443296 OS=Cucurbita moschata OX=3662 GN=LOC1114432...	[more]
A0A0A0L3W6	7.0e-103	90.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G645280 PE=4 SV=1	[more]
A0A1S3BUF7	9.1e-103	90.32	uncharacterized protein LOC103493629 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CCK9	6.5e-101	90.37	uncharacterized protein LOC111010256 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of Tan0020890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12210.2	1.1e-76	70.23	DNA binding	[more]
AT3G12210.1	9.1e-55	76.81	DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..218
None	No IPR available	PANTHER	PTHR21521	UNCHARACTERIZED	coord: 2..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020890.1	Tan0020890.1	mRNA