Tan0020856 (gene) Snake gourd v1

Overview


Name	Tan0020856
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein ROOT INITIATION DEFECTIVE 3-like
Location	LG01: 8732884 .. 8734497 (+)
RNA-Seq Expression	Tan0020856
Synteny	Tan0020856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCAAAGAAGCAGAAAGATTATAAAGATAAATGCATTGTTTTCAACGCCCATTACCATTAAGTTTCTACCTAAAACTTGCACTTCTTGTTTATCAAATTCTTCACTTTCATACGTTAAATTCTTCACTTTCATACCTTCCACAAGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCCTATGATGCCTCCACAGGCACCCCTCTAGCCAGCTTCAATGGTAGCCGTTCGCCTCGCCGTGGCATCACCCGGGCTGGGAGAAGTTTCATAGCCGTCTCCCACATCTGCCCTATCACTGCCTCGGGTTCGATCCACCTTTATAATTGGTGGACTTCATATGCCTTTCAAAGCCTCACTGTCCCTGAACCTGTTGCCCCTCTTACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCATTTCAGGCTGCATCCATGCACTCTCTCTTCCATCAGGGGATGTTCTCAACTCTTTACCTGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACCATTGTTGTCATCCCAATCTTTCAACTTGTACAAGCCAAACCAAAAGAAAATGCAACCAAACACATTCTGTATCAGTTTTCAGCCCATGCTGATTCAGTGACTTCCATTTACTCTGGCACGGGAATGTCCAGTTCCCAAATAGTCTCTTGTTCATTGGATGGAAGATGCAAGTTCTGGAGCTTGCTCTCAGGGACAGCCTTGCACACCGTGGTGTTCCCTTGTGCCATTTTCAGTGTAGTCTTAGACCCAACAGAGACAGAGTTTTTCGCTGCAGGATCTGATGGCTTGGTATACACGGGCTCATTGAGACATAAAAACAAACACCTTATGGGCACAGACTCTGAACCAATTCCACCAGCACCCAATGACTTGACATACAAGCGCTCATTGGGGCATGTAAACAAACACCATGTGGGCACAAGCTCTGAACTAATTCCATGGGCGCCAAAGCACGATACCGCCGTTGTCTCTATAGTTATAGTAAATGAAGGAACTCAGTTAATCTCTGCAGCAGAAGATGGGAGCATATGGGTTTGGCAAGTGAACAAAGGGCAGGTCATAATGGCGCTTGAAAATGAGATGGGAAGCATAAGCGATTTAGTGATGGCCACGGATAAAAGCCATGGAAAAGAACAGAGTGTTAGAATGAGCAGCCATGGCAGAGCATTGGAAAGTGAGAGCTTTAGATTACAGAGTAGAATGTTGGGCTCGTCAATAAATCAAACAGTTGATATGCAAGGTGCGTTGGCGGCGGCCGGAAGCGACATGAGGAGAGCCATTGAGTTGCTGGAATCTGCCATCGCTGTGTATGAGAAGATGTTGGAGTTAATCCTCAAGGAAGCCAAAGCAGCTTACAAACAAAGAGAAGAAAACAAGGATAATGATATATAAAATTGGATGCAAATCCCCATCATGCATCCATTTTCGTCTTACTATAGCACGACTAGTTTACACTCATCTCGACCTACTTTTAAATATTTGCCTCGATTTTTTTCTTTTTAATTTGAATGTCTAACATTTTCGTCGAA

mRNA sequence

GCCAAAGAAGCAGAAAGATTATAAAGATAAATGCATTGTTTTCAACGCCCATTACCATTAAGTTTCTACCTAAAACTTGCACTTCTTGTTTATCAAATTCTTCACTTTCATACGTTAAATTCTTCACTTTCATACCTTCCACAAGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCCTATGATGCCTCCACAGGCACCCCTCTAGCCAGCTTCAATGGTAGCCGTTCGCCTCGCCGTGGCATCACCCGGGCTGGGAGAAGTTTCATAGCCGTCTCCCACATCTGCCCTATCACTGCCTCGGGTTCGATCCACCTTTATAATTGGTGGACTTCATATGCCTTTCAAAGCCTCACTGTCCCTGAACCTGTTGCCCCTCTTACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCATTTCAGGCTGCATCCATGCACTCTCTCTTCCATCAGGGGATGTTCTCAACTCTTTACCTGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACCATTGTTGTCATCCCAATCTTTCAACTTGTACAAGCCAAACCAAAAGAAAATGCAACCAAACACATTCTGTATCAGTTTTCAGCCCATGCTGATTCAGTGACTTCCATTTACTCTGGCACGGGAATGTCCAGTTCCCAAATAGTCTCTTGTTCATTGGATGGAAGATGCAAGTTCTGGAGCTTGCTCTCAGGGACAGCCTTGCACACCGTGGTGTTCCCTTGTGCCATTTTCAGTGTAGTCTTAGACCCAACAGAGACAGAGTTTTTCGCTGCAGGATCTGATGGCTTGGTATACACGGGCTCATTGAGACATAAAAACAAACACCTTATGGGCACAGACTCTGAACCAATTCCACCAGCACCCAATGACTTGACATACAAGCGCTCATTGGGGCATGTAAACAAACACCATGTGGGCACAAGCTCTGAACTAATTCCATGGGCGCCAAAGCACGATACCGCCGTTGTCTCTATAGTTATAGTAAATGAAGGAACTCAGTTAATCTCTGCAGCAGAAGATGGGAGCATATGGGTTTGGCAAGTGAACAAAGGGCAGGTCATAATGGCGCTTGAAAATGAGATGGGAAGCATAAGCGATTTAGTGATGGCCACGGATAAAAGCCATGGAAAAGAACAGAGTGTTAGAATGAGCAGCCATGGCAGAGCATTGGAAAGTGAGAGCTTTAGATTACAGAGTAGAATGTTGGGCTCGTCAATAAATCAAACAGTTGATATGCAAGGTGCGTTGGCGGCGGCCGGAAGCGACATGAGGAGAGCCATTGAGTTGCTGGAATCTGCCATCGCTGTGTATGAGAAGATGTTGGAGTTAATCCTCAAGGAAGCCAAAGCAGCTTACAAACAAAGAGAAGAAAACAAGGATAATGATATATAAAATTGGATGCAAATCCCCATCATGCATCCATTTTCGTCTTACTATAGCACGACTAGTTTACACTCATCTCGACCTACTTTTAAATATTTGCCTCGATTTTTTTCTTTTTAATTTGAATGTCTAACATTTTCGTCGAA

Coding sequence (CDS)

ATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCCTATGATGCCTCCACAGGCACCCCTCTAGCCAGCTTCAATGGTAGCCGTTCGCCTCGCCGTGGCATCACCCGGGCTGGGAGAAGTTTCATAGCCGTCTCCCACATCTGCCCTATCACTGCCTCGGGTTCGATCCACCTTTATAATTGGTGGACTTCATATGCCTTTCAAAGCCTCACTGTCCCTGAACCTGTTGCCCCTCTTACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCATTTCAGGCTGCATCCATGCACTCTCTCTTCCATCAGGGGATGTTCTCAACTCTTTACCTGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACCATTGTTGTCATCCCAATCTTTCAACTTGTACAAGCCAAACCAAAAGAAAATGCAACCAAACACATTCTGTATCAGTTTTCAGCCCATGCTGATTCAGTGACTTCCATTTACTCTGGCACGGGAATGTCCAGTTCCCAAATAGTCTCTTGTTCATTGGATGGAAGATGCAAGTTCTGGAGCTTGCTCTCAGGGACAGCCTTGCACACCGTGGTGTTCCCTTGTGCCATTTTCAGTGTAGTCTTAGACCCAACAGAGACAGAGTTTTTCGCTGCAGGATCTGATGGCTTGGTATACACGGGCTCATTGAGACATAAAAACAAACACCTTATGGGCACAGACTCTGAACCAATTCCACCAGCACCCAATGACTTGACATACAAGCGCTCATTGGGGCATGTAAACAAACACCATGTGGGCACAAGCTCTGAACTAATTCCATGGGCGCCAAAGCACGATACCGCCGTTGTCTCTATAGTTATAGTAAATGAAGGAACTCAGTTAATCTCTGCAGCAGAAGATGGGAGCATATGGGTTTGGCAAGTGAACAAAGGGCAGGTCATAATGGCGCTTGAAAATGAGATGGGAAGCATAAGCGATTTAGTGATGGCCACGGATAAAAGCCATGGAAAAGAACAGAGTGTTAGAATGAGCAGCCATGGCAGAGCATTGGAAAGTGAGAGCTTTAGATTACAGAGTAGAATGTTGGGCTCGTCAATAAATCAAACAGTTGATATGCAAGGTGCGTTGGCGGCGGCCGGAAGCGACATGAGGAGAGCCATTGAGTTGCTGGAATCTGCCATCGCTGTGTATGAGAAGATGTTGGAGTTAATCCTCAAGGAAGCCAAAGCAGCTTACAAACAAAGAGAAGAAAACAAGGATAATGATATATAA

Protein sequence

MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITASGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSDGLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSVRMSSHGRALESESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKMLELILKEAKAAYKQREENKDNDI

Homology

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BLAST of Tan0020856 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.2e-35
Identity = 102/335 (30.45%), Postives = 152/335 (45.37%), Query Frame = 0


Query: 8   VVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITASGSIHLY 67
           V+ +SS D  I ++D  TGT    F    SP  G+T  G  F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 68  NWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLPAHKKPVS 127
           +W    A       EP+  L A  +G YL  GGISG I+   + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 128 CLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVTSIYSGTG 187
           CL  S D SLL+SG  DG+I V  + +L     ++       + F+ H  SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 188 MSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSDGLVYTGS 247
             ++ I+S S D  CK WSL  G  L  ++FP  I ++ LDP    F+A   D  +Y G+
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 248 LRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTAVVSIVIV 307
           +   +++  GT               + LG V+               +   A+  +   
Sbjct: 245 INATSEY--GT---------------QVLGSVS---------------EKGKAITCLAYC 304

Query: 308 NEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGS 343
            +G  LIS +EDG + VW     + +  L +  GS
Sbjct: 305 ADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGS 307

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BLAST of Tan0020856 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.7e-25
Identity = 87/340 (25.59%), Postives = 155/340 (45.59%), Query Frame = 0


Query: 3   SSPQEVVLASSPDGPI---VAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPIT 62
           ++P E+VL++   G +     ++  TG+ L ++ G  +  RG+   G  ++    +    
Sbjct: 2   AAPLELVLSADAAGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL---- 61

Query: 63  ASGSIHLYNW---WTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVL 122
             G  ++  W         Q +  P PV  L+A+P+G YL A GI+  I+   + +G +L
Sbjct: 62  --GKNYINVWELQRRDQLQQKIVCPGPVNCLSASPNGLYLVA-GIAESIYLWEVSTGHLL 121

Query: 123 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHA 182
             L +H + V+CL  + D S +ISG  D  ++V  ++ ++Q +          Y +S H+
Sbjct: 122 AILNSHYQDVTCLTFTDDSSHIISGAKDSLVLVWGLYSVLQVETSRGPEPR--YVWSRHS 181

Query: 183 DSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFA 242
             +T +  G G   +++ + SLD   K W + SG  L +V+F   I SV  DP E   F 
Sbjct: 182 LPITDVQCGIGGPQARVATSSLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFC 241

Query: 243 AGSDGLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPK 302
            GSDG++Y   L    +        P  P   ++ +K   GH N+               
Sbjct: 242 GGSDGVIYQVDLYTTPEQ----RERPFHP-EQEMVFK---GHRNQ--------------- 301

Query: 303 HDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMAL 337
               V  + +  +G+ LIS + D ++ VW +   Q + ++
Sbjct: 302 ----VTCLSVSLDGSMLISGSHDETVCVWDIQSKQSLRSV 305

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BLAST of Tan0020856 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 7.4e-24
Identity = 87/344 (25.29%), Postives = 156/344 (45.35%), Query Frame = 0


Query: 3   SSPQEVVLASSPDGPI---VAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPIT 62
           ++P EV + +    P+   + ++  +G  L ++ G ++  RG+      ++  + +    
Sbjct: 2   AAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL---- 61

Query: 63  ASGSIHLYNW---WTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVL 122
             G  ++  W         Q +  P PV  LTA+P+G Y+ A G++  IH   + +G++L
Sbjct: 62  --GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLA-GVAESIHLWEVSTGNLL 121

Query: 123 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKE-NATKHILYQFSAH 182
             L  H + VSCL+ + D S  ISGG D  ++V  +  ++QA P    A +H+   +S H
Sbjct: 122 VILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAPRHV---WSHH 181

Query: 183 ADSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFF 242
           A  +T ++ G G   +++ + SLD   K W + SG  L +V+F  +I +V +D  E   F
Sbjct: 182 ALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMF 241

Query: 243 AAGSDGLVYTGSL------RHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSE 302
             GS+G ++   L      R ++ H            P     K   GH N+        
Sbjct: 242 CGGSEGSIFQVDLFTWPGQRERSFH------------PEQDAGKVFKGHRNQ-------- 301

Query: 303 LIPWAPKHDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVI 334
                      V  + +  +G+ L+S + D ++ +W V   Q I
Sbjct: 302 -----------VTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCI 304

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BLAST of Tan0020856 vs. ExPASy Swiss-Prot
Match: Q68EI0 (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-23
Identity = 94/350 (26.86%), Postives = 154/350 (44.00%), Query Frame = 0


Query: 3   SSPQEVVLASSPDGPI---VAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPIT 62
           S+P EVVL++   G +     YD  TG+   S+ G  +  R +T     +I  + +    
Sbjct: 2   SAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQL---- 61

Query: 63  ASGSIHLYNW---WTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVL 122
             G  ++  W         Q +  P  V  L A+PDG Y+ A GI+  I+   + +G++L
Sbjct: 62  --GKNYINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLA-GIAEAIYLWEVSTGNLL 121

Query: 123 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQA-KPKENATKHILYQFSAH 182
             L  H + +SC+K + D S  +SGG D    +  +  +VQ    +    +HIL   S H
Sbjct: 122 AILSRHFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVVQLDSSRTPEPRHIL---SRH 181

Query: 183 ADSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFF 242
           +  +T I+ G     +++ + SLD   K W + SG  L +V+F   I SV  DP E   F
Sbjct: 182 SLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLF 241

Query: 243 AAGSDGLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAP 302
             GSDG ++  SL   +                D T++            + SE      
Sbjct: 242 CGGSDGNIFQVSLCSTS-------------LSRDKTFQ------------SDSEGNQVFK 301

Query: 303 KHDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISD 346
            H   V  + +  +GT L+S + D ++ +W V   Q I  + N  G +++
Sbjct: 302 GHRNLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWTI-NHRGPVTN 315

[Close]

BLAST of Tan0020856 vs. ExPASy Swiss-Prot
Match: Q10272 (Pre-rRNA-processing protein crb3/ipi3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=crb3 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.6e-21
Identity = 102/435 (23.45%), Postives = 184/435 (42.30%), Query Frame = 0


Query: 18  IVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITASGSIHLYNWWTSYAFQS 77
           ++ ++  TGT +++F  S   +          ++  H  P      ++++N+      QS
Sbjct: 18  VLCHNLHTGTLVSTFRQSSPAKNATCTTLNHLLSAQHTRP-----QLNIHNFGKEILDQS 77

Query: 78  LTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLPAHKKPVSCLKLSADGSL 137
           + +PE +  + ++P G +L AG   G ++  SL SG ++    AH +P++ LK S DG +
Sbjct: 78  IILPEILICVQSSPCGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQPLTILKFSNDGMV 137

Query: 138 LISGGDDGTIVVIPIFQLVQAK---PKENATKHILYQFSAHADSVTSIYSGTG-MSSSQI 197
           L +  +DG +    I  LV         N++   +  FS H  S+ S+  G G + S ++
Sbjct: 138 LFTASNDGDVFAWLISTLVDQNSTFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRL 197

Query: 198 VSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSDGLV----YTGSLR 257
            + S D   + W + +G  L T+  P     + +DP+E   +     G++    YTGS  
Sbjct: 198 YTASEDNTIRIWDVSTGNLLTTIALPSTPSCMTVDPSERVVYVGNEKGIIWIPLYTGSST 257

Query: 258 HKN-----KHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTAVVSI 317
             N     K +   D+  IP A         +G V  ++    S +I       T  VS 
Sbjct: 258 FSNNVKEKKRVTSVDNTTIPNAIG------GMGRVVDYNDSRESSIISCQSPITTLTVSF 317

Query: 318 VIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDK-SHGKEQSVRMS 377
               + + LIS  +DG++ VW     QV+  L      +S L    DK S     S+   
Sbjct: 318 ----DASLLISGDKDGNVLVWDSVSRQVLRRLVQYYSPVSFLQCKVDKISFYSNSSLSFP 377

Query: 378 SHGRALESESFRLQSRML--GSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKMLE 437
              R + +E      R+      + Q +  +  L  +   + +     ES+     +  E
Sbjct: 378 VLKRMITNEYLNSDVRICIQDDGVEQLMQPENILKISSDIVTQG---SESSWRAKAETSE 434

[Close]

BLAST of Tan0020856 vs. NCBI nr
Match: XP_038889657.1 (protein ROOT INITIATION DEFECTIVE 3-like [Benincasa hispida])

HSP 1 Score: 722.6 bits (1864), Expect = 2.0e-204
Identity = 374/439 (85.19%), Postives = 396/439 (90.21%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MP S QEVVLASSPDGPIVAYDASTGTPLASF+GS SPRRGITRAG+SFIAVSHI P+TA
Sbjct: 1   MPFSQQEVVLASSPDGPIVAYDASTGTPLASFSGSCSPRRGITRAGKSFIAVSHISPVTA 60

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
            GSIH+YNWWTS AFQSLTVPEPVAPLTAT DGFYLFAGG+SG IH LSLPSGDVLNSLP
Sbjct: 61  LGSIHIYNWWTSSAFQSLTVPEPVAPLTATTDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 120

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKP+ENAT HIL+QF AH DSVT
Sbjct: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPQENATTHILHQFLAHTDSVT 180

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SSSQIVSCSLDGRCKFWSLLSGT LHTVVFPCAIFSVVL+PTETEFFAAGSD
Sbjct: 181 SIYSGMGISSSQIVSCSLDGRCKFWSLLSGTILHTVVFPCAIFSVVLEPTETEFFAAGSD 240

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY  SLRH NKHLMGTD EPIPP  NDL YKR L   NKH  GTS ELIPW+PKH+ A
Sbjct: 241 GLVYKASLRHNNKHLMGTDYEPIPPISNDLGYKRPLRRKNKHLTGTSYELIPWSPKHEAA 300

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           V+SIVI+NEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT+KSHGKEQS 
Sbjct: 301 VISIVIINEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATEKSHGKEQST 360

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
              SHGRA+E SESFRL  +MLG SINQTVDMQ A+AAAGSD+RRAIE+LESAIAVYEKM
Sbjct: 361 --GSHGRAMEISESFRLPIKMLGLSINQTVDMQEAVAAAGSDVRRAIEMLESAIAVYEKM 420

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEAKA+Y QREE +
Sbjct: 421 LELILKEAKASYNQREEKQ 437

[Close]

BLAST of Tan0020856 vs. NCBI nr
Match: XP_008451730.1 (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo] >TYK16268.1 protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 717.2 bits (1850), Expect = 8.5e-203
Identity = 365/439 (83.14%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MPSSPQEVVLASSPDGPIVAYDASTGTPLA+FN SRSPRRGITRAG+SFIAVSHICP+TA
Sbjct: 3   MPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWWTS AFQ LTVPEPVAPLTATPDGFYL AGG+SG IH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT+HIL+QF AH DSVT
Sbjct: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SS++IVSCSLD RCKFWSLLSGT LHTVVFPCAIFSVVL+P+E EFFAAGSD
Sbjct: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH NKH  GTD + IP   NDL YKRSL H NKH  GTSSELIPW+PKH+ A
Sbjct: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHEAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVIVNEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT+++HGKEQ V
Sbjct: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
           R   HGR ++ SE FRL  +MLG SI +TVDMQG LAAAGSD+RRAIE+LESAIAVYEKM
Sbjct: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEA+A+Y QREE +
Sbjct: 423 LELILKEAEASYNQREETQ 441

[Close]

BLAST of Tan0020856 vs. NCBI nr
Match: KAA0059059.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 717.2 bits (1850), Expect = 8.5e-203
Identity = 365/439 (83.14%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MPSSPQEVVLASSPDGPIVAYDASTGTPLA+FN SRSPRRGITRAG+SFIAVSHICP+TA
Sbjct: 3   MPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWWTS AFQ LTVPEPVAPLTATPDGFYLFAGG+SG IH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT+HIL+QF AH DSVT
Sbjct: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SS++IVSCSLD RCKFWSLLSGT LHTVVFPCAIFSVVL+P+E EFFAAGSD
Sbjct: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH NKH  GTD + IP   NDL YKRSL H NKH  GTS ELIPW+PKH+ A
Sbjct: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVIVNEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT+++HGKEQ V
Sbjct: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
           R   HGR ++ SE FRL  +MLG SI +TVDMQG LAAAGSD+RRAIE+LESAIAVYEKM
Sbjct: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEA+A+Y QREE +
Sbjct: 423 LELILKEAEASYNQREETQ 441

[Close]

BLAST of Tan0020856 vs. NCBI nr
Match: KAG6577024.1 (Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 714.9 bits (1844), Expect = 4.2e-202
Identity = 365/436 (83.72%), Postives = 392/436 (89.91%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MP SPQEVVLASSPDGPIVAYDASTGTPLASFN SRSPRRGITRAGRS IAVSHICPITA
Sbjct: 3   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPITA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWW S AFQS+TVPEPVAPLTATPDGFYLFAGG+SGCIH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AH+K VSCL+LSADGSLLISGGDDG IVV+PIFQLVQAKP+ENATKHIL+QFSAH DSVT
Sbjct: 123 AHRKSVSCLELSADGSLLISGGDDGMIVVMPIFQLVQAKPQENATKHILHQFSAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYS  GMSSSQIVS S+DGRCKFWSLLSGT LHTVVFPCAIFSVVLDP+ETEFFAAGSD
Sbjct: 183 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH  KHL+ TDSE  PPA +DL Y+ SL H NKH +GTSSELI W+PKHD A
Sbjct: 243 GLVYKGSLRHNIKHLISTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHDAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVI+NEG  LISAAEDG+IWVWQVNKGQVIM LENEMGSISDLV+AT+K H KE++V
Sbjct: 303 VVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKERNV 362

Query: 361 RMSSHGRALESESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKML 420
           R  SHGRA++ ES RL S MLG  INQT +MQGA+AA GSD+RRAIELLESAIA+YEKML
Sbjct: 363 RSGSHGRAMKRESSRLPSPMLGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEKML 422

Query: 421 ELILKEAKAAYKQREE 437
           ELILKEAKA Y QREE
Sbjct: 423 ELILKEAKAGYNQREE 438

[Close]

BLAST of Tan0020856 vs. NCBI nr
Match: KAG7015046.1 (Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 714.5 bits (1843), Expect = 5.5e-202
Identity = 364/436 (83.49%), Postives = 392/436 (89.91%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MP SPQEVVLASSPDGPIVAYDASTGTPLASFN SRSPRRGITRAGRS IAVSHICPITA
Sbjct: 3   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPITA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWW S AFQS+TVPEPVAPLTATPDGFYLFAGG+SGCIH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AH+K VSCL+LSADGSLLISGGDDG IVV+PIFQLVQAKP+ENATKHIL+QFSAH DSVT
Sbjct: 123 AHRKSVSCLELSADGSLLISGGDDGMIVVMPIFQLVQAKPQENATKHILHQFSAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYS  GMSSSQIVS S+DGRCKFWSLLSGT LHTVVFPCAIFSVVLDP+ETEFFAAGSD
Sbjct: 183 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH  KHL+ TDSE  PPA +DL Y+ SL H NKH +GTSSELI W+PKHD A
Sbjct: 243 GLVYKGSLRHNIKHLISTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHDAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVS+VI+NEG  LISAAEDG+IWVWQVNKGQVIM LENEMGSISDLV+AT+K H KE++V
Sbjct: 303 VVSVVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKERNV 362

Query: 361 RMSSHGRALESESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKML 420
           R  SHGRA++ ES RL S MLG  INQT +MQGA+AA GSD+RRAIELLESAIA+YEKML
Sbjct: 363 RSGSHGRAMKRESSRLPSPMLGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEKML 422

Query: 421 ELILKEAKAAYKQREE 437
           ELILKEAKA Y QREE
Sbjct: 423 ELILKEAKAGYNQREE 438

[Close]

BLAST of Tan0020856 vs. ExPASy TrEMBL
Match: A0A5A7UZU9 (Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00860 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 4.1e-203
Identity = 365/439 (83.14%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MPSSPQEVVLASSPDGPIVAYDASTGTPLA+FN SRSPRRGITRAG+SFIAVSHICP+TA
Sbjct: 3   MPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWWTS AFQ LTVPEPVAPLTATPDGFYLFAGG+SG IH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT+HIL+QF AH DSVT
Sbjct: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SS++IVSCSLD RCKFWSLLSGT LHTVVFPCAIFSVVL+P+E EFFAAGSD
Sbjct: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH NKH  GTD + IP   NDL YKRSL H NKH  GTS ELIPW+PKH+ A
Sbjct: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHEAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVIVNEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT+++HGKEQ V
Sbjct: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
           R   HGR ++ SE FRL  +MLG SI +TVDMQG LAAAGSD+RRAIE+LESAIAVYEKM
Sbjct: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEA+A+Y QREE +
Sbjct: 423 LELILKEAEASYNQREETQ 441

[Close]

BLAST of Tan0020856 vs. ExPASy TrEMBL
Match: A0A5D3CYC7 (Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00370 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 4.1e-203
Identity = 365/439 (83.14%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MPSSPQEVVLASSPDGPIVAYDASTGTPLA+FN SRSPRRGITRAG+SFIAVSHICP+TA
Sbjct: 3   MPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWWTS AFQ LTVPEPVAPLTATPDGFYL AGG+SG IH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT+HIL+QF AH DSVT
Sbjct: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SS++IVSCSLD RCKFWSLLSGT LHTVVFPCAIFSVVL+P+E EFFAAGSD
Sbjct: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH NKH  GTD + IP   NDL YKRSL H NKH  GTSSELIPW+PKH+ A
Sbjct: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHEAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVIVNEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT+++HGKEQ V
Sbjct: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
           R   HGR ++ SE FRL  +MLG SI +TVDMQG LAAAGSD+RRAIE+LESAIAVYEKM
Sbjct: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEA+A+Y QREE +
Sbjct: 423 LELILKEAEASYNQREETQ 441

[Close]

BLAST of Tan0020856 vs. ExPASy TrEMBL
Match: A0A1S3BRK4 (protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo OX=3656 GN=LOC103492937 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 4.1e-203
Identity = 365/439 (83.14%), Postives = 395/439 (89.98%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MPSSPQEVVLASSPDGPIVAYDASTGTPLA+FN SRSPRRGITRAG+SFIAVSHICP+TA
Sbjct: 3   MPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPVTA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWWTS AFQ LTVPEPVAPLTATPDGFYL AGG+SG IH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT+HIL+QF AH DSVT
Sbjct: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SS++IVSCSLD RCKFWSLLSGT LHTVVFPCAIFSVVL+P+E EFFAAGSD
Sbjct: 183 SIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH NKH  GTD + IP   NDL YKRSL H NKH  GTSSELIPW+PKH+ A
Sbjct: 243 GLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHEAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVIVNEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT+++HGKEQ V
Sbjct: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQCV 362

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
           R   HGR ++ SE FRL  +MLG SI +TVDMQG LAAAGSD+RRAIE+LESAIAVYEKM
Sbjct: 363 RTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYEKM 422

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEA+A+Y QREE +
Sbjct: 423 LELILKEAEASYNQREETQ 441

[Close]

BLAST of Tan0020856 vs. ExPASy TrEMBL
Match: A0A6J1JCF3 (protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483208 PE=4 SV=1)

HSP 1 Score: 713.0 bits (1839), Expect = 7.8e-202
Identity = 364/435 (83.68%), Postives = 392/435 (90.11%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MP SPQEVVLASSPDGPIVAYDASTGTPLASFN S SPRRGITRAGRS IAVSHICPITA
Sbjct: 1   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSHSPRRGITRAGRSSIAVSHICPITA 60

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWW S AFQS+TVPEPVAPLTATPDGFYLFAGG+SGCIH LSLPSGDVLNSLP
Sbjct: 61  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 120

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AH+K VSCL+LSADGSLLISGGDDGTIVVIPIFQLVQAKP+ENATKHIL+QFSAH DSVT
Sbjct: 121 AHRKSVSCLELSADGSLLISGGDDGTIVVIPIFQLVQAKPQENATKHILHQFSAHNDSVT 180

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYS  GMSSSQIVS S+DGRCKFWSLLSGT LHTVVFPCAIFSVVLDP+ETEFFAAGSD
Sbjct: 181 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAGSD 240

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSLRH  KHL+ TDSE  PPA ++L Y+ SL H NKH +GTSSELI W+PKHD A
Sbjct: 241 GLVYKGSLRHNIKHLISTDSELTPPASDNLAYRCSLRHKNKHLMGTSSELISWSPKHDAA 300

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVI+NEG  LISAAEDG+IWVWQVNKGQVIM LENEMGSISDLV+AT+K H KE++V
Sbjct: 301 VVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKERNV 360

Query: 361 RMSSHGRALESESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKML 420
           R  SHGRA++SES RL S MLG  INQT +MQGA+AA GSD+RRAIELLESAIA+YEKML
Sbjct: 361 RRGSHGRAMKSESSRLPSPMLGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEKML 420

Query: 421 ELILKEAKAAYKQRE 436
           ELILKEAKA Y Q+E
Sbjct: 421 ELILKEAKAGYNQKE 435

[Close]

BLAST of Tan0020856 vs. ExPASy TrEMBL
Match: A0A0A0L0D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083560 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 6.6e-201
Identity = 364/439 (82.92%), Postives = 392/439 (89.29%), Query Frame = 0


Query: 1   MPSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITA 60
           MPSSPQEVVLASSPDGPIVAYDASTGT LASFN SRSPRRGITRAG+SFIAVSHICP+TA
Sbjct: 3   MPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62

Query: 61  SGSIHLYNWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLP 120
           SGSIH+YNWWTS AFQ LTVPEPVAPLTATPDGFYLFAGG+SG IH LSLPSGDVLNSLP
Sbjct: 63  SGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNSLP 122

Query: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVT 180
           AHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKP+ENAT+HIL+QF AH DSVT
Sbjct: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDSVT 182

Query: 181 SIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSD 240
           SIYSG G+SS+QIVSCSLDGRCK W+LLSGT LHTVVFPCAIFSVVL+P+ETEFFAAGSD
Sbjct: 183 SIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAGSD 242

Query: 241 GLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTA 300
           GLVY GSL H NK   GTD E IP   NDL Y+RSL H NKH  GTSSELIPW+ KH+ A
Sbjct: 243 GLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHEAA 302

Query: 301 VVSIVIVNEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGSISDLVMATDKSHGKEQSV 360
           VVSIVIVNEG  LISAAEDGSIWVW+V KGQVIMALENEMGSISDLVMAT++SHGKEQ V
Sbjct: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQCV 362

Query: 361 RMSSHGRALE-SESFRLQSRMLGSSINQTVDMQGALAAAGSDMRRAIELLESAIAVYEKM 420
           +  SHG A+E SE FRL  +MLG SI QTV+MQG + AAGSD+ RAIE+LESAIAVYEKM
Sbjct: 363 KTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYEKM 422

Query: 421 LELILKEAKAAYKQREENK 439
           LELILKEAKA+Y QREE +
Sbjct: 423 LELILKEAKASYNQREETQ 441

[Close]

BLAST of Tan0020856 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 3.0e-36
Identity = 102/335 (30.45%), Postives = 152/335 (45.37%), Query Frame = 0


Query: 8   VVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPITASGSIHLY 67
           V+ +SS D  I ++D  TGT    F    SP  G+T  G  F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 68  NWWTSYAFQSLTVPEPVAPLTATPDGFYLFAGGISGCIHALSLPSGDVLNSLPAHKKPVS 127
           +W    A       EP+  L A  +G YL  GGISG I+   + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 128 CLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPKENATKHILYQFSAHADSVTSIYSGTG 187
           CL  S D SLL+SG  DG+I V  + +L     ++       + F+ H  SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 188 MSSSQIVSCSLDGRCKFWSLLSGTALHTVVFPCAIFSVVLDPTETEFFAAGSDGLVYTGS 247
             ++ I+S S D  CK WSL  G  L  ++FP  I ++ LDP    F+A   D  +Y G+
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 248 LRHKNKHLMGTDSEPIPPAPNDLTYKRSLGHVNKHHVGTSSELIPWAPKHDTAVVSIVIV 307
           +   +++  GT               + LG V+               +   A+  +   
Sbjct: 245 INATSEY--GT---------------QVLGSVS---------------EKGKAITCLAYC 304

Query: 308 NEGTQLISAAEDGSIWVWQVNKGQVIMALENEMGS 343
            +G  LIS +EDG + VW     + +  L +  GS
Sbjct: 305 ADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGS 307

[Close]

BLAST of Tan0020856 vs. TAIR 10
Match: AT1G58230.1 (binding )

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-08
Identity = 39/143 (27.27%), Postives = 66/143 (46.15%), Query Frame = 0


Query: 92   DGFYLFAGGISGCIHALSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIP 151
            + F +  G      H +SL  G V+ S+  HK  VSC+ ++AD ++L +G  D T++V  
Sbjct: 2339 ENFLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWD 2398

Query: 152  IFQLVQAKPK---------------ENATKHILYQFSAHADSVTSIYSGTGMSSSQIVSC 211
            I ++   + +                +A  HIL     H D +T +Y  T +    ++S 
Sbjct: 2399 ILRMRTPEKRVRNTHAEVLRKDIVIADAPSHIL---CGHDDIITCLYVSTDLDI--VISG 2458

Query: 212  SLDGRCKFWSLLSGTALHTVVFP 220
            S DG C F +L  G  + ++  P
Sbjct: 2459 SKDGTCVFHTLREGRYIRSLKHP 2476

[Close]

BLAST of Tan0020856 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-05
Identity = 56/233 (24.03%), Postives = 89/233 (38.20%), Query Frame = 0


Query: 99  GGISGCIHALSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQA 158
           GG+         PSG +L++L  H K V+ +K   D  L+++   D T+        +  
Sbjct: 240 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTV-------RIWR 299

Query: 159 KPKEN--ATKHILYQFSAHADSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTV 218
            P +   A  + L   SA   +VT        ++   VS SLDG   F+ L SG+ L  V
Sbjct: 300 NPGDGNYACGYTLNDHSAEVRAVT-----VHPTNKYFVSASLDGTWCFYDLSSGSCLAQV 359

Query: 219 VFPCAIFSVVLDPTETEFFAAGSDGLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSL 278
                              +  S  + YT +  H +  ++GT +        D+   +S 
Sbjct: 360 -------------------SDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDV---KSQ 419

Query: 279 GHVNKHHVGTSSELIPWAPKHDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNK 330
            +V K               H   V +I     G  L +AAEDG + +W + K
Sbjct: 420 ANVAKF------------DGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRK 425

[Close]

BLAST of Tan0020856 vs. TAIR 10
Match: AT2G33340.2 (MOS4-associated complex 3B )

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-05
Identity = 56/233 (24.03%), Postives = 89/233 (38.20%), Query Frame = 0


Query: 99  GGISGCIHALSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQA 158
           GG+         PSG +L++L  H K V+ +K   D  L+++   D T+        +  
Sbjct: 240 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTV-------RIWR 299

Query: 159 KPKEN--ATKHILYQFSAHADSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTV 218
            P +   A  + L   SA   +VT        ++   VS SLDG   F+ L SG+ L  V
Sbjct: 300 NPGDGNYACGYTLNDHSAEVRAVT-----VHPTNKYFVSASLDGTWCFYDLSSGSCLAQV 359

Query: 219 VFPCAIFSVVLDPTETEFFAAGSDGLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSL 278
                              +  S  + YT +  H +  ++GT +        D+   +S 
Sbjct: 360 -------------------SDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDV---KSQ 419

Query: 279 GHVNKHHVGTSSELIPWAPKHDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNK 330
            +V K               H   V +I     G  L +AAEDG + +W + K
Sbjct: 420 ANVAKF------------DGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRK 425

[Close]

BLAST of Tan0020856 vs. TAIR 10
Match: AT2G33340.3 (MOS4-associated complex 3B )

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-05
Identity = 56/233 (24.03%), Postives = 89/233 (38.20%), Query Frame = 0


Query: 99  GGISGCIHALSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQA 158
           GG+         PSG +L++L  H K V+ +K   D  L+++   D T+        +  
Sbjct: 240 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTV-------RIWR 299

Query: 159 KPKEN--ATKHILYQFSAHADSVTSIYSGTGMSSSQIVSCSLDGRCKFWSLLSGTALHTV 218
            P +   A  + L   SA   +VT        ++   VS SLDG   F+ L SG+ L  V
Sbjct: 300 NPGDGNYACGYTLNDHSAEVRAVT-----VHPTNKYFVSASLDGTWCFYDLSSGSCLAQV 359

Query: 219 VFPCAIFSVVLDPTETEFFAAGSDGLVYTGSLRHKNKHLMGTDSEPIPPAPNDLTYKRSL 278
                              +  S  + YT +  H +  ++GT +        D+   +S 
Sbjct: 360 -------------------SDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDV---KSQ 419

Query: 279 GHVNKHHVGTSSELIPWAPKHDTAVVSIVIVNEGTQLISAAEDGSIWVWQVNK 330
            +V K               H   V +I     G  L +AAEDG + +W + K
Sbjct: 420 ANVAKF------------DGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRK 425

The following BLAST results are available for this feature:

BLAST of Tan0020856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B4	4.2e-35	30.45	Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1...	[more]
A0A1L8HX76	8.7e-25	25.59	WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1	[more]
Q9BV38	7.4e-24	25.29	WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2	[more]
Q68EI0	1.3e-23	26.86	WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1	[more]
Q10272	7.6e-21	23.45	Pre-rRNA-processing protein crb3/ipi3 OS=Schizosaccharomyces pombe (strain 972 /...	[more]

BLAST of Tan0020856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889657.1	2.0e-204	85.19	protein ROOT INITIATION DEFECTIVE 3-like [Benincasa hispida]	[more]
XP_008451730.1	8.5e-203	83.14	PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo] >TYK16268.1 p...	[more]
KAA0059059.1	8.5e-203	83.14	protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo var. makuwa]	[more]
KAG6577024.1	4.2e-202	83.72	Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. soro...	[more]
KAG7015046.1	5.5e-202	83.49	Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Tan0020856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZU9	4.1e-203	83.14	Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3CYC7	4.1e-203	83.14	Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BRK4	4.1e-203	83.14	protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo OX=3656 GN=LOC103492937...	[more]
A0A6J1JCF3	7.8e-202	83.68	protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0L0D5	6.6e-201	82.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G083560 PE=4 SV=1	[more]

BLAST of Tan0020856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49180.1	3.0e-36	30.45	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G58230.1	2.0e-08	27.27	binding	[more]
AT2G33340.1	7.9e-05	24.03	MOS4-associated complex 3B	[more]
AT2G33340.2	7.9e-05	24.03	MOS4-associated complex 3B	[more]
AT2G33340.3	7.9e-05	24.03	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 406..442
None	No IPR available	PANTHER	PTHR18763:SF3	OS09G0477800 PROTEIN	coord: 1..438
None	No IPR available	PANTHER	PTHR18763	WD-REPEAT PROTEIN 18	coord: 1..438
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 119..149 score: 8.65015
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 294..331 score: 8.966513
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 112..151 e-value: 8.6E-7 score: 38.6 coord: 209..247 e-value: 140.0 score: 3.5 coord: 287..326 e-value: 0.31 score: 20.1 coord: 165..206 e-value: 0.001 score: 28.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 169..206 e-value: 0.072 score: 14.0 coord: 115..149 e-value: 4.7E-6 score: 27.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 172..215 score: 8.703868
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 294..335 score: 11.845179
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 119..149 score: 10.274523
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..164 e-value: 6.3E-19 score: 69.8
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 277..367 e-value: 1.1E-6 score: 29.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 165..253 e-value: 4.8E-9 score: 37.5
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 8..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020856.1	Tan0020856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030174	regulation of DNA-dependent DNA replication initiation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005656	nuclear pre-replicative complex
cellular_component	GO:0097344	Rix1 complex
molecular_function	GO:0005515	protein binding