Tan0020839 (gene) Snake gourd v1

Overview


Name	Tan0020839
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	prefoldin subunit 1
Location	LG08: 13377622 .. 13381023 (+)
RNA-Seq Expression	Tan0020839
Synteny	Tan0020839

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACAAAACAACCCGGTAGATCACGGTTACATTTGGACCCTAAAAAGGTTCAAACATTCATATTCGTAATTTGCAAATTTGTCATCAGCCATCGTCTACGCGAACTCTGAATCAGCAATGGCGGACGAAGCGAATAGAGCTGTGAGTACTTTTCCTCTTCTAATCTTGTTTTTCCACTTGCCACTGCCATTTTACTGATGCATGGGCTTTTGATTTTCTTTCTGGAATCAGGCTTTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTCAAGCAGGTAATTCTCTTTCACTCCTTGGACTTACTGGAAATGATTTAATTTAATCTTTTGTACTTGTAGGAATGAAAGCTTTTAGTAATTCTTGTCTGGATTGAACTTATATGTGTTGTGCCGATGATAAAAAGCTTCTTCTTCTTCTTCTTCGTGTTTAGTTAGTAATGTAAATGAATGTTTTCTGGGTCAATTGATGAATCTAATCAATGTTGGTTGTTTTGTTTCTTGTATGTTTATTTGTTGTTAGACTCGTTTTCTTTTTGCAGCTTTTTTTTTCTTTTTTTGGGGGAGGGCGGAGTTCTTTATTATGTTCCTTCTAGTTAAGAAAGAATGTTAACCTGATTGATGATTTTTCTTTTCTCATATCAATTGTTCTTAATGAACTGGTAAAGAAATAAAAAAGGAGAAAATGCAGTCGTGATGATGGTTTTGTTAATTAATGAGATGTAAAGAGTTTGGATGATAAAGATGAAGACAATTTACTGTGACTTCTTTGCCTTCTTTTTTTGAGCAACTGTTTCAACTGAGGGGCTTTGGTAGCTAACTCTTTTATTCATGCTAGAACATCTACCAAGGTTGTCTAGGCCAAATTTACTTGCTATGACCTTATGCCGTAAAGCATTAGGTTCGTGAGGGAACCTCTAGAGCCATTTTTAGACTAGAGCAACATTCCATGTGAAAATATTGCCAATCCCAGGCCCCTTTCTCCGAGGGATGAGAGAATATATTCCAATTAACACGATGGCATCCTCCATTTCTACAGTACCAAGAGGATTTTCTTGTGTGCAGTCAGCGAGAGGTCATTTACCCAGACTACACAATGAGTATCTTTTTCCCACCTGAACTGTCATTCTTCGTGTGAACAAGTGATTATTCACAACATGAACTTATCAATGTGAATTCTTCTTATTTTTTGAGTGTCTGTGCCTGTGCATTTTATCCTCTCTATCATCACAAGTTGCATTCTATATTTGTTACACAAATTGTATAATATATAAAAATACAATTATATAATTTACATCTTTTAACAAGCATATGTTGAGTCTATGACTCTACCGAATAGTGGTCGATATTGTAGCTTTTGTTGTGTTGGAGTTGTTTTATAGTAAAATGTAATAAATGTAGATTTTAAGGGGTTTATTTTGGTGAAGATAGAGGGAGGAGATATTTAAGGAGATCAAGACCTTATGTTTCATCATTGACTGCATAATATTTACGCAAAGCTACATTTTCCTTTGTCAGACTTGCATAGAAGGTGTTATAGTTTTCTTTGAAATTTCTTATGAAAAAACTCATGTAATAAGTCTCTTAGTGAAGCTCTTTAACTTGGGTTAGTTTCTGGAATGTTGAGTACATAATGTATGGCGTAGAGATTAAGGCAAGTCCTGAAAATCTCAAAATTAAAATGCAGATGCACTGATGCAGTTTGCTATTTCTTTTGTGCATTACAAATTTAGTTCTTTGTCATTCTTCAACTTGTCACTTTATCTATTTGTAGAGTTCTTGACTAGTTAAAGCTGGTCTTTATGCTTTCAGGTGCAGACCCAGTTACGAAACAAGGAAGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGATGACACTAATGCGTACAAATCTATAGGTACTTGACAAAGCTTTATTTTTTAACTGGAAGGCTGTTCACTCTGCGCCACAATCATGATTAGCTACGAAACATGTTAATAGTTTTTTTTTTTTTTTAAACTTTGTTAGGTTGAGCTTTATCACTGATTTTCTTCCATCATTCTTTGTGGTGCAGGAAGAACGTGAGTTATGCTACAATTAAGTGAACGAATTAAAGTCAGTTCTCATATTATACAAATGAAATTCTCTTACTTTGTGTTGTCTCGTTCTGACCAGGTTTGTTTTAGAGCCAAAGTCAGTTCTAATGACTGAACAAGAGAAAAAGCTCAAGGATAGTGAAGCTGCAGTTGCTTCACTGCAGGTACATATTAGTATTACTTTCCTCTTCAGAGACGAGATCTTCATTTTGAATTTCCCAATTTCATATACGTGTCATTCACGTTGTCTTTTCATGAAGATTTAGTTACATTTGCATGTACATATCAGATGTTAGAGCATTTTCCTTGACAACAATTTCTTGCTCTTCTCTGTTCTATATTTTCTCTTTAAACAGTTAGATAAGTGTAGCATGTATACTCTGACTTCTGCTAAATACATTTCAGTTTTTGCATTAACGCAGAATCCCCCCACACACACACACACACACAAAACGGTATTTCTTTTGAGGATCTGGGCATTTCTTGGGATTTCCAAACACTTCTTTGAACGAATTACTTGTTGCATTAAGAATCAAGTTCGCTGAAGAGTTTTTAATGCCAAAAATATTATAACTCAATTGGGGTCAGAGGTTCGAATCTTCGTCTCCATGTCGTTAAACTCAAAAATATATCTACATGTATCTATATTATTCTTGGCATCTAATTGAAAGCAAACTTATTTCTCAGTTTTTACCCTTTCTTTCCCTTCTCCTTAAATTACTTGGGTAACATTATTTGACTGGTAGAGGTGTCCTTACCTCATTCGGAGTGCAGTGTGCTTTCAATGCTTCCCTTTGAACATTTGCGATTTACACTATTTAGAGATATTCTCATTTTATCCTCAACAATTGGCATTTGGCTCTTTTCATGAAAGATTATTTTCTTGCACATTTGCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGTCAGATTATGTCCATGTCTGTAGCATAAGACAGGCTCTGCCCCCCTTGAATTTGACTCTAGCTCAGCTTGTTGCAGTTTATGTTCACAATAGTTTTTTGGGTTAGAAGAATTTTATGTGTGGTGTTGTGAATTGTGATTCTACTCTGTTGGCCTCTATTGCTATTTCTGATGCCAAAACTTTGTTTGATATGCAATATATACTCCCAAGTTCCCAACTCTGTTTTCATAGTTGGAAGGTTAAAAGATGAGTAACCTTATTGGTGGGAAGTTCGAAATCCTATATCATCTTTTTAATTCTTTTTTAGAAAGAAC

mRNA sequence

AAAAAAACAAAACAACCCGGTAGATCACGGTTACATTTGGACCCTAAAAAGGTTCAAACATTCATATTCGTAATTTGCAAATTTGTCATCAGCCATCGTCTACGCGAACTCTGAATCAGCAATGGCGGACGAAGCGAATAGAGCTGCTTTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTCAAGCAGGTGCAGACCCAGTTACGAAACAAGGAAGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGATGACACTAATGCGTACAAATCTATAGGAAGAACGTTTGTTTTAGAGCCAAAGTCAGTTCTAATGACTGAACAAGAGAAAAAGCTCAAGGATAGTGAAGCTGCAGTTGCTTCACTGCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGTCAGATTATGTCCATGTCTGTAGCATAAGACAGGCTCTGCCCCCCTTGAATTTGACTCTAGCTCAGCTTGTTGCAGTTTATGTTCACAATAGTTTTTTGGGTTAGAAGAATTTTATGTGTGGTGTTGTGAATTGTGATTCTACTCTGTTGGCCTCTATTGCTATTTCTGATGCCAAAACTTTGTTTGATATGCAATATATACTCCCAAGTTCCCAACTCTGTTTTCATAGTTGGAAGGTTAAAAGATGAGTAACCTTATTGGTGGGAAGTTCGAAATCCTATATCATCTTTTTAATTCTTTTTTAGAAAGAAC

Coding sequence (CDS)

ATGGCGGACGAAGCGAATAGAGCTGCTTTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTCAAGCAGGTGCAGACCCAGTTACGAAACAAGGAAGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGATGACACTAATGCGTACAAATCTATAGGAAGAACGTTTGTTTTAGAGCCAAAGTCAGTTCTAATGACTGAACAAGAGAAAAAGCTCAAGGATAGTGAAGCTGCAGTTGCTTCACTGCAGAGCTCAAAGGAGTATTTAGAGAAGCAGATGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGTCAGATTATGTCCATGTCTGTAGCATAA

Protein sequence

MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIARQIMSMSVA

Homology

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BLAST of Tan0020839 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-12
Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 7   RAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           + AF E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADVQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELL 114
           L+ K  +  +  +K K +E  +  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Tan0020839 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 7   RAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           + AF E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELL 114
           L+ K  + ++  +K K +E  +  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Tan0020839 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.2e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 7   RAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           + AF E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELL 114
           L+ K V+  +  +K K ++  +  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEVIHNQLLEKQKIAKEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Tan0020839 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.2e-12
Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 7   RAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           + AF E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELL 114
           L+ K  +  +  +K K +E  +  L+  K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Tan0020839 vs. ExPASy Swiss-Prot
Match: Q54JS0 (Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.8e-10
Identity = 30/110 (27.27%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 6   NRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTF 65
           ++ AF E + ++  ++  L  ++ +++  E ++K+  +T+ EL+ LS +T  YK++G+ F
Sbjct: 5   DKQAFFETREKLYTLSRSLNIIKQRIQIAENDRKKCLITINELESLSSETKTYKAVGKMF 64

Query: 66  VLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQ 116
           V+ P + L TE +++++  E  V  L +  +Y++ Q+ + E +L EL+++
Sbjct: 65  VISPMTSLKTELKQQVQKDEEDVKGLINQSKYIDAQITDTERSLNELVRK 114

[Close]

BLAST of Tan0020839 vs. NCBI nr
Match: XP_022149806.1 (prefoldin subunit 1 [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANR AFLEIQGRMIE+TGKLKQVQTQ+RNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLM EQE+KLKDSEAA+ASLQ+SKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. NCBI nr
Match: XP_022929581.1 (prefoldin subunit 1-like [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 6.6e-55
Identity = 119/129 (92.25%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRA FLEIQGRMIEITGKLKQVQTQ+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLM EQE+KLKDSEAA+ SL SSKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMS+A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of Tan0020839 vs. NCBI nr
Match: XP_023536940.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54
Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRA FLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQE+KLKDSEAA+ SLQSSKEYLEKQ AEVENNLRELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. NCBI nr
Match: XP_023546624.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54
Identity = 119/129 (92.25%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRA FLEIQGRMIEITGKLKQVQTQ+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLM EQE+KLKDSEA + SL SSKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. NCBI nr
Match: KAG6586128.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.9 bits (564), Expect = 3.3e-54
Identity = 119/129 (92.25%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRA FLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQE+K KDSEAA+ SLQSSKEYLEKQ AEVENNLRELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.4e-56
Identity = 120/129 (93.02%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANR AFLEIQGRMIE+TGKLKQVQTQ+RNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLM EQE+KLKDSEAA+ASLQ+SKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55
Identity = 119/129 (92.25%), Postives = 125/129 (96.90%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRA FLEIQGRMIEITGKLKQVQTQ+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLM EQE+KLKDSEAA+ SL SSKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMS+A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of Tan0020839 vs. ExPASy TrEMBL
Match: A0A6J1HND5 (prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRA FLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQE+KLKDSEAA+ SLQSSKEYLEKQ AEVENNL+ELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMTVA 129

[Close]

BLAST of Tan0020839 vs. ExPASy TrEMBL
Match: A0A6J1FB94 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.9e-54
Identity = 117/129 (90.70%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRA FLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQE+K KDSEAA+ SLQSSKEYLEKQ AEVENNL+EL+QQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLKELVQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.3e-53
Identity = 116/129 (89.92%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADE NRA FLEIQGRMIEITGKLKQ+QTQ+RNKEGEKKRAFLTLEELKQL++DTN YKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLE KSVLM EQE+K KDSE A+ASLQSSKEYLEKQMAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 130
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Tan0020839 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 )

HSP 1 Score: 197.2 bits (500), Expect = 8.1e-51
Identity = 104/128 (81.25%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEA RAAF+EIQ  MIE+TGKLKQVQ Q+RNKEG++KRAFLTLEEL+ L ++TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IGRTFVLEPK+VL  EQE+KLKDSEAAVASLQ+SKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGRTFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 128

[Close]

BLAST of Tan0020839 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 )

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-48
Identity = 102/128 (79.69%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MADEANRAAFLEIQGRMIEITGKLKQVQTQLRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEA RAAF+EIQ  MIE+TGKLKQVQ Q+RNKEG++KRAFLTLEEL+ L ++TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLEPKSVLMTEQEKKLKDSEAAVASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120
           IG+ FVLEPK+VL  EQE+KLKDSEAAVASLQ+SKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGK-FVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 127

The following BLAST results are available for this feature:

BLAST of Tan0020839 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SZE2	5.5e-12	35.51	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1	[more]
O60925	5.5e-12	35.51	Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2	[more]
Q9CWM4	7.2e-12	35.51	Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1	[more]
Q5RAM7	7.2e-12	35.51	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1	[more]
Q54JS0	8.8e-10	27.27	Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 ...	[more]

BLAST of Tan0020839 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149806.1	1.3e-55	93.02	prefoldin subunit 1 [Momordica charantia]	[more]
XP_022929581.1	6.6e-55	92.25	prefoldin subunit 1-like [Cucurbita moschata]	[more]
XP_023536940.1	1.1e-54	93.02	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023546624.1	1.5e-54	92.25	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6586128.1	3.3e-54	92.25	Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0020839 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9I1	6.4e-56	93.02	prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1	[more]
A0A6J1ENI7	3.2e-55	92.25	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1	[more]
A0A6J1HND5	2.7e-54	91.47	prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1	[more]
A0A6J1FB94	7.9e-54	90.70	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1	[more]
A0A0A0LJF7	2.3e-53	89.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1	[more]

BLAST of Tan0020839 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07340.1	8.1e-51	81.25	PREFOLDIN 1	[more]
AT2G07340.2	1.7e-48	79.69	PREFOLDIN 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	COILS	Coil	Coil	coord: 74..115
None	No IPR available	PANTHER	PTHR20903	PREFOLDIN SUBUNIT 1-RELATED	coord: 1..123
None	No IPR available	PANTHER	PTHR20903:SF0	PREFOLDIN SUBUNIT 1	coord: 1..123
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 9..114
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 8..117 e-value: 8.2E-18 score: 66.2
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 13..115 e-value: 1.2E-20 score: 73.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020839.1	Tan0020839.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding