Tan0020835 (gene) Snake gourd v1

Overview


Name	Tan0020835
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG11: 15379372 .. 15379879 (+)
RNA-Seq Expression	Tan0020835
Synteny	Tan0020835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAGAGAGAGATGGAAGAGGGACGTAAAATGAAAATGGGTTTGTTGATGGCAATGATGTTTATGGGTTGTTTAGCCGAATCTTCCTCCAAGAATGAAAATGTGGTGCTTGAACTCTTCTCCGATGGTGAACATCAACATCAACATGAACAAGTTGTGAAATACTTGAACAATGTTAGTCCAACCAGAAAAATGATCATGAAATTAGATGGAGCATCCCGTTCATGTTTTGGTCCTTGCTTTAGTTACAATGCTTGCGGTTCTGGGTGTAGATGCATCTATGCTCCTCCTGTAGGTGGAATTTGTGTCTAATTGAACATCATCCTTCCCCTAGCAGCCACACTTTAATTATGTAGGCTTCCCATTTCATTTTATCATCTCTTAAATTTCAATTTCTCCAAGTCTGTGTCTGTGCACTTAATTTCTGTTGTCTTTGTTTGTGTTTGTTTCTCTCTACCTCATCAATTTCTTCCTGACTAAATAAAGTGGAGGTCAGTTTAAAGTGTG

mRNA sequence

GAAAGAGAGAGAGATGGAAGAGGGACGTAAAATGAAAATGGGTTTGTTGATGGCAATGATGTTTATGGGTTGTTTAGCCGAATCTTCCTCCAAGAATGAAAATGTGGTGCTTGAACTCTTCTCCGATGGTGAACATCAACATCAACATGAACAAGTTGTGAAATACTTGAACAATGTTAGTCCAACCAGAAAAATGATCATGAAATTAGATGGAGCATCCCGTTCATGTTTTGGTCCTTGCTTTAGTTACAATGCTTGCGGTTCTGGGTGTAGATGCATCTATGCTCCTCCTGTAGGTGGAATTTGTGTCTAATTGAACATCATCCTTCCCCTAGCAGCCACACTTTAATTATGTAGGCTTCCCATTTCATTTTATCATCTCTTAAATTTCAATTTCTCCAAGTCTGTGTCTGTGCACTTAATTTCTGTTGTCTTTGTTTGTGTTTGTTTCTCTCTACCTCATCAATTTCTTCCTGACTAAATAAAGTGGAGGTCAGTTTAAAGTGTG

Coding sequence (CDS)

ATGGAAGAGGGACGTAAAATGAAAATGGGTTTGTTGATGGCAATGATGTTTATGGGTTGTTTAGCCGAATCTTCCTCCAAGAATGAAAATGTGGTGCTTGAACTCTTCTCCGATGGTGAACATCAACATCAACATGAACAAGTTGTGAAATACTTGAACAATGTTAGTCCAACCAGAAAAATGATCATGAAATTAGATGGAGCATCCCGTTCATGTTTTGGTCCTTGCTTTAGTTACAATGCTTGCGGTTCTGGGTGTAGATGCATCTATGCTCCTCCTGTAGGTGGAATTTGTGTCTAA

Protein sequence

MEEGRKMKMGLLMAMMFMGCLAESSSKNENVVLELFSDGEHQHQHEQVVKYLNNVSPTRKMIMKLDGASRSCFGPCFSYNACGSGCRCIYAPPVGGICV

Homology

The following BLAST results are available for this feature:

BLAST of Tan0020835 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020835 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020835 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020835 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..20 score: 6.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020835.1	Tan0020835.1	mRNA