Tan0020743 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGAATGTCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCGTCGAAAATGCCTATACGAACCCAATTCATTACTTCGGGATCAAAATGTAGAATCAAAGGAAAGCGGTCTTTGTTTGAGATGAAAAAAAAAACAATTGCAATTGCAGATTTCTTTTTTTTTTGACTTCGCCCTTTGCATTGAAAGAAAAGATTCCAAAATAATATGATTCAACCTCAAACCCTTTTGAATGTAGCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATCCGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAAACAGTTAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAAGATGGGACCGTGAGATAGTTATAGTATTTGAATTAAATTAATTAGTAGATTGTGTATCACGTATATACCTTTTAAAATTAATAACTATTTAATAAAAAAAGCATGTTGATTAGATCAAAATTAAAAGTAACCAATAATTTTCGTTTATCATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCGCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTAAATTTAAAACGGATCAGTCGACCAGGTCTCCGAATCTATTCTAACTATCAACGAATTCCTAGAATTTTAGGCGGAATGGGCATTGTAATTCTTTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCGACTACAGGAAATCGGCGGAGAAATTTTGTGTTATATATGGTAATCTTTATAATATTCGAATTATACACAGAACTTCCCTATTTCTAAAAAAAAAAAGAGAAGAGGTGGGTTTCTAATACCACTCCTCCTTCATTAATTGATACTTTGAAAGGGGTTTCATCTGGAATGAAAGAACAAAAAAGGGATTTATGAAGGTTTAATTACTGAATCACTTCCCACTGGTATGTTTGGGGTTTGTTTAGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCGACATCGTTTTATACATATACTAGGTCATATAGAGTCAAAATTGCAGTAAGTTGTTACGATTCAACCAGAACCAGAGGGCGTATAATTTAGAGACTACGAAACAAAGATTCGAATGATTAGGTGAAGTAGTCTTTTCACTTGCAATATTCTTTTTTTGTAGGGATACAATTCGAAATAGAAAATTTCAAGAAACGGATTTTCTTCCAATAAGTAGATTCGGAATTAAGGTAAGGAATGACAAATATGAAAATCAGGGCCTCCATTCGGAAAATTTGTGAAAAATGTCGACTAATCCGGAGGCGGAGACGAATTATGGTAATTTGTTCCAATCCGAGACATAAACAAAGACAAGGATAATCTTTATAAAAAAAGGACCCCTAAAGCACGATATACACATCAAAATAAATAAAGGATCCGTTTTGACATGAAATGGATATATCCATATATCTCTGACTTAGATTTATGAGATGATAAAATATGGCAAAACCCATACCAAGAATCGGTTCACGTAGAAATGGACGTATTAGCTCACGTAAAAGTACGCGTAGAATACCAAAGGGCGTTATTCATGTTCAAGCAAGTTTCAACAATACAATTGTGACTGTTACAGATGTACGGGGTCGGGTAATTTCTTGGTCCTCCGCCGGTACTTGTGGATTCAAAGGTACAAGAAGAGGGACACCATTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGGGCAGTAGTGGATCAGGGTATGCAACGAGCAGAAGTCATGATAAAGGGCCCTGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGCGGTATACTCTTTAGTTTCATACGGGATGTAACCCCTATGCCACATAATGGCTGTAGGCCCCCTAAAAAACGACGTGTGTCAAAATAAACATTGAAGAGAAATTTCAAGAGAAATAAATAATTCAATGATTTGATCAAAAAATATTACTATGGTTCGAGAGAAAATAAGAGTATCGACTCGGACACTAAAGTGGAAGTGTGTTGAATCAAGAGCAGACAGTAAGCGTCTTTATTATGGCCGCTTTATTCTGTCTCCACTTATGAAGGGTCAAGCCGATACTATAGGCATTGCGATGCGAAAAGCTTTGCTTGGAGAAATAGAGGGAACATGTATCACACGTGCAAAATCTGAAAAAATACCACATTCATACTATACCATAGTCGGTATTCAAGAATCAGTACATGAAATTTTAATGAATTTGAAAGAAATTGTATTGAGAAGTAATCTGTATGGAACTCGTGATGCGTCTATTTGTGTCAAGGGTCCTGGATGCGTAACTGCTCAAGACATCATCTTACCACCTTCTGTGGAAATCGTTGATAATACACAGCATATAGCTAACCTAACGGAGCCAATTAATTTGTGTATTGAATTAAAGATCGAGAGGAATCGCGGATATCGTATACAAACGCCAAATAATTTTCAAGACGTAAGTTATCCTGTAGATGCTATATTCATGCCTGTTCGAAATGCGAATCATAGTATTCATTCTTATGTAAATGGGAATGAAAAACAAGAGATACTTTTTCTCGAAATATGGACCAATGGAAGTTTAACGCCTAAAGAAGCACTTCATGAAGCCTCTCGGAATTTGATTGATTTATTTATTCCCTTTTTACATGCGGAAGAAGAAAACTTCCATTTAAAAAACAATAAACAAAAAGTTACTTTACCCCTTTTGACTTTGAATGAGAAATTGGCTAAACTAAGGAAAAAGAAAAAAGAAATAGCATTCAAATATATTTTTATTGACCAATTAGAATTGCCTCCTAGGATCTATAATTGCCTCAAAAGGTCCAATATACATACATTATTTGACCTTTTGAATAATAGTCCAGACGAACTTATGAAAATGAAATATTTTCGCATAGAAGACGTAAAACATATATTAGACATTCTCGAAATGGAAAAGAATTTTGCATAAATTTGAAATCCATTGGATTTTTTTGTAGAAAAACTTTAGAAAAGAAAAAAAAAGACGAAAACGAAGTTTGAATCTTTAACGGAATCCGTATACTCAAAATCAATCAAAAATTTCATTAAATATGTGTATCTAGGGGTAATTCACTTTGAAGCAACTATTCCCTAGATACACACGTCGTGATATTTTCTTTATTTCACAATTGAATCAATTTAAAAAAGACCTAAAGTTAGGGATTTCTCAATCGGTAATGTTGCTCCAATACCCAACCAAAGGGCTACTGCGGTACCAATCAAAAAGACGGTTGTCGCTACTGGACGACGAAATGGATTTTGGAATTTATTGACATTCTCCAAAAATGGTACAGTTAATAATCCCGCAGGTACGGAAACCATTAAAAGAACACCCAATAACTTATTTGGCACTGTCCGAAGTATTTGAAATACGGGAAAGAAATACCATTCCGGCAATATTTCCAAAGGAGTTGCAAATGGATCTGCGGGTTCACCAATCATTGATGGTTCTAGAACCGCTAAGCCCACGTTACATGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGATCATTGGGCCATGCGGGTTCTCCGTAATAATTATGACCCATACCCTTAGCCAATTTAGCTCTTAATACAGGATCATTCAAATCTGGTTTTTTTGTTATTAGGATAGGTGAATTATTATGGATCCATCCCCCGAAAGAACCGGACATGATAATTTTTCATCATCCGGCTCGAGCACAAATCAAACGAACCAACTGGCGCCAGATAAAAAATCGATATCTTATCCATATCCAAGCATATATAAAATAAATGATTGATTCAATGTAAGAAAAAATTTAGCAGATTCTGTTTTCCAGAGTTGCAATTATCCATTGCAAGGAATGCAGTTCTTACAGATAAATGCTCAATACCCAAGTAGGCTTACAAAGTTGATAATGTTCAAGTGCTTTCTGGGTCGTCTCAGACCTTGCGATGGGGCTTTAG ATGAAAGGAATGTCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATCCGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAAACAAATCGGTTCACGTAGAAATGGACGTATTAGCTCACGTAAAAGTACGCGTAGAATACCAAAGGGCGTTATTCATGTTCAAGCAAGTTTCAACAATACAATTGTGACTGTTACAGATGTACGGGGTCGGGTAATTTCTTGGTCCTCCGCCGGTACTTGTGGATTCAAAGGTACAAGAAGAGGGACACCATTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGGGCAGTAGTGGATCAGGGTATGCAACGAGCAGAAGTCATGATAAAGGGCCCTGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGCGGTATACTCTTTAGTTTCATACGGGATGGTCAAGCCGATACTATAGGCATTGCGATGCGAAAAGCTTTGCTTGGAGAAATAGAGGGAACATGTATCACACGTGCAAAATCTGAAAAAATACCACATTCATACTATACCATAGTCGGTATTCAAGAATCAGTACATGAAATTTTAATGAATTTGAAAGAAATTGTATTGAGAAGTAATCTGTATGGAACTCGTGATGCGTCTATTTGTGTCAAGGGTCCTGGATGCGTAACTGCTCAAGACATCATCTTACCACCTTCTGTGGAAATCGTTGATAATACACAGCATATAGCTAACCTAACGGAGCCAATTAATTTGTGTATTGAATTAAAGATCGAGAGGAATCGCGGATATCGTATACAAACGCCAAATAATTTTCAAGACGTAAGTTATCCTGTAGATGCTATATTCATGCCTGTTCGAAATGCGAATCATATTAATAATCCCGCAGACCTTGCGATGGGGCTTTAG ATGAAAGGAATGTCTTATCGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACGACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGCCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATCCGATATGATGACAATGCTGCGGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAAACAAATCGGTTCACGTAGAAATGGACGTATTAGCTCACGTAAAAGTACGCGTAGAATACCAAAGGGCGTTATTCATGTTCAAGCAAGTTTCAACAATACAATTGTGACTGTTACAGATGTACGGGGTCGGGTAATTTCTTGGTCCTCCGCCGGTACTTGTGGATTCAAAGGTACAAGAAGAGGGACACCATTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGGGCAGTAGTGGATCAGGGTATGCAACGAGCAGAAGTCATGATAAAGGGCCCTGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGCGGTATACTCTTTAGTTTCATACGGGATGGTCAAGCCGATACTATAGGCATTGCGATGCGAAAAGCTTTGCTTGGAGAAATAGAGGGAACATGTATCACACGTGCAAAATCTGAAAAAATACCACATTCATACTATACCATAGTCGGTATTCAAGAATCAGTACATGAAATTTTAATGAATTTGAAAGAAATTGTATTGAGAAGTAATCTGTATGGAACTCGTGATGCGTCTATTTGTGTCAAGGGTCCTGGATGCGTAACTGCTCAAGACATCATCTTACCACCTTCTGTGGAAATCGTTGATAATACACAGCATATAGCTAACCTAACGGAGCCAATTAATTTGTGTATTGAATTAAAGATCGAGAGGAATCGCGGATATCGTATACAAACGCCAAATAATTTTCAAGACGTAAGTTATCCTGTAGATGCTATATTCATGCCTGTTCGAAATGCGAATCATATTAATAATCCCGCAGACCTTGCGATGGGGCTTTAG MKGMSYRGNRICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPDNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELKQIGSRRNGRISSRKSTRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILFSFIRDGQADTIGIAMRKALLGEIEGTCITRAKSEKIPHSYYTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICVKGPGCVTAQDIILPPSVEIVDNTQHIANLTEPINLCIELKIERNRGYRIQTPNNFQDVSYPVDAIFMPVRNANHINNPADLAMGL Homology
BLAST of Tan0020743 vs. ExPASy Swiss-Prot
Match: Q4VZK3 (DNA-directed RNA polymerase subunit alpha OS=Cucumis sativus OX=3659 GN=rpoA PE=3 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.2e-74 Identity = 138/152 (90.79%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy Swiss-Prot
Match: Q09WY5 (DNA-directed RNA polymerase subunit alpha OS=Morus indica OX=248361 GN=rpoA PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.5e-72 Identity = 134/145 (92.41%), Postives = 140/145 (96.55%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy Swiss-Prot
Match: Q49KW6 (DNA-directed RNA polymerase subunit alpha OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rpoA PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 2.4e-70 Identity = 131/152 (86.18%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy Swiss-Prot
Match: Q2PMQ3 (DNA-directed RNA polymerase subunit alpha OS=Glycine max OX=3847 GN=rpoA PE=3 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.6e-69 Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy Swiss-Prot
Match: Q9MTJ3 (DNA-directed RNA polymerase subunit alpha OS=Oenothera elata subsp. hookeri OX=85636 GN=rpoA PE=3 SV=2) HSP 1 Score: 263.5 bits (672), Expect = 4.5e-69 Identity = 127/152 (83.55%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of Tan0020743 vs. NCBI nr
Match: RDY14681.1 (DNA-directed RNA polymerase subunit alpha, partial [Mucuna pruriens]) HSP 1 Score: 718.8 bits (1854), Expect = 3.0e-203 Identity = 372/474 (78.48%), Postives = 400/474 (84.39%), Query Frame = 0
BLAST of Tan0020743 vs. NCBI nr
Match: KAD4981935.1 (hypothetical protein E3N88_18606 [Mikania micrantha]) HSP 1 Score: 605.5 bits (1560), Expect = 3.7e-169 Identity = 331/476 (69.54%), Postives = 354/476 (74.37%), Query Frame = 0
BLAST of Tan0020743 vs. NCBI nr
Match: KAD7117051.1 (hypothetical protein E3N88_04319 [Mikania micrantha]) HSP 1 Score: 591.7 bits (1524), Expect = 5.5e-165 Identity = 323/461 (70.07%), Postives = 345/461 (74.84%), Query Frame = 0
BLAST of Tan0020743 vs. NCBI nr
Match: KAF8376862.1 (hypothetical protein HHK36_031458 [Tetracentron sinense] >KAF8398788.1 hypothetical protein HHK36_014646 [Tetracentron sinense]) HSP 1 Score: 584.7 bits (1506), Expect = 6.7e-163 Identity = 311/404 (76.98%), Postives = 331/404 (81.93%), Query Frame = 0
BLAST of Tan0020743 vs. NCBI nr
Match: KAF9660677.1 (hypothetical protein SADUNF_SadunfPtG0000200 [Salix dunnii] >KAF9664285.1 hypothetical protein SADUNF_Sadunf16G0002000 [Salix dunnii]) HSP 1 Score: 576.6 bits (1485), Expect = 1.8e-160 Identity = 310/455 (68.13%), Postives = 331/455 (72.75%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy TrEMBL
Match: A0A371II16 (Plastid-encoded RNA polymerase subunit alpha (Fragment) OS=Mucuna pruriens OX=157652 GN=rpoA PE=3 SV=1) HSP 1 Score: 718.8 bits (1854), Expect = 1.4e-203 Identity = 372/474 (78.48%), Postives = 400/474 (84.39%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy TrEMBL
Match: A0A5N6NML1 (S1-like domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_18606 PE=3 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 1.8e-169 Identity = 331/476 (69.54%), Postives = 354/476 (74.37%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy TrEMBL
Match: A0A5N6PW93 (Ribosomal_L2_C domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_04319 PE=3 SV=1) HSP 1 Score: 591.7 bits (1524), Expect = 2.7e-165 Identity = 323/461 (70.07%), Postives = 345/461 (74.84%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy TrEMBL
Match: A0A6A5PE04 (RPOLD domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00046743 PE=3 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 1.6e-146 Identity = 282/375 (75.20%), Postives = 307/375 (81.87%), Query Frame = 0
BLAST of Tan0020743 vs. ExPASy TrEMBL
Match: A0A5N6N9A8 (S1-like domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_22057 PE=3 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 1.9e-142 Identity = 283/422 (67.06%), Postives = 307/422 (72.75%), Query Frame = 0
BLAST of Tan0020743 vs. TAIR 10
Match: ATCG00740.1 (RNA polymerase subunit alpha ) HSP 1 Score: 249.2 bits (635), Expect = 6.2e-66 Identity = 119/152 (78.29%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Tan0020743 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 ) HSP 1 Score: 204.9 bits (520), Expect = 1.3e-52 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 0
BLAST of Tan0020743 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 ) HSP 1 Score: 182.6 bits (462), Expect = 7.2e-46 Identity = 90/98 (91.84%), Postives = 95/98 (96.94%), Query Frame = 0
BLAST of Tan0020743 vs. TAIR 10
Match: ATCG00790.1 (ribosomal protein L16 ) HSP 1 Score: 164.9 bits (416), Expect = 1.5e-40 Identity = 75/83 (90.36%), Postives = 79/83 (95.18%), Query Frame = 0
BLAST of Tan0020743 vs. TAIR 10
Match: AT2G28830.1 (PLANT U-BOX 12 ) HSP 1 Score: 116.3 bits (290), Expect = 6.3e-26 Identity = 59/82 (71.95%), Postives = 66/82 (80.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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