Tan0020563 (gene) Snake gourd v1

Overview


Name	Tan0020563
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Copper transporter
Location	LG01: 29072689 .. 29074702 (+)
RNA-Seq Expression	Tan0020563
Synteny	Tan0020563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGATTCATTAAAATCCTGAAACAGACTGCGTTCTTATCCGTTATCAGAGATTCAGAAACGAAGCAACCTCCTTAGTACCACACACGATTTTCAGCCACCGGAGCCGCCATGGATGCCGCCGACAATTCTCACCACCACCATATGCACGGCATGGCGCCACCGCCGGCCTCCTCCGCCGCGTCGCCGGAGATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTTCATCGCTGGCCTGGCGGTCGCTCCGGTATGTACGCCTTGGCCTTGATCTTTGTCTTCGTGCTTGCTTTCATCGTCGAGTGGCTTTCGCATTGCCGATTGATCAAGGAGGATTCCAGCGCCGCGGCGGCGGGATTGATCCGGACTCTGTTGCACACGGTTAGGGTTGGATTGGCCTATTTAGTGATGCTTGCGGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTTGCTGTCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAAATCGGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGAAATCGATGATGAAGGAATGTGGAAATCTGCAATTGAATTGTGAAGGTCCGTTTTATGCTTATTTTCATCCTCTTACTTGAGCAAGCATTTGAATTCTAAAGCTATTTATTTAGTTTTCAAAAATTAGATTAGTTTTTGAAAACCTAGGTAAAAAGTGGATAAGAAGAAATATAAACTCATAGGTAGATATATTATTTTTAGGTTTAAATTTTAAAAACTAAAAACCAAAAACATGATTGAATTTTTGAAAGTTGGTTTAAACTGCTGCTGTTGCTGTTGTTGAGTTGCTGCTGATGAATTTTTTGGTTTCGATTTCCATTTGGAATTTTGAAAGTTTAGAAACAAAATTTGTTTTTCGAATTCTTGCAGCTTATGCCAAGTTATAACGGAAGGGGAATTGGTATTTGGAAATGCTTGGATTCAGATTCCGGGATAATTCGCTTGTAATTTTCTTCTTTCTCACAGTCACATTTCATCTTTTTCATTTGGATTCTTAATTTTAATTGTAAGGAAGAACTAAGAAGATATTCATCGAACTTTTAGAGATTATTGATAGGGTTAGGAAAAAGAAATGTTATTATCACTATTATTATAATTTATGAATTACCCTTTTTTTAGGGTTGTTAAGGACTCTGATTGGTATGTCATTTGGTTGTGTGGTTTTAGATTTACTGAACTCAGC

mRNA sequence

CGGATTCATTAAAATCCTGAAACAGACTGCGTTCTTATCCGTTATCAGAGATTCAGAAACGAAGCAACCTCCTTAGTACCACACACGATTTTCAGCCACCGGAGCCGCCATGGATGCCGCCGACAATTCTCACCACCACCATATGCACGGCATGGCGCCACCGCCGGCCTCCTCCGCCGCGTCGCCGGAGATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTTCATCGCTGGCCTGGCGGTCGCTCCGGTATGTACGCCTTGGCCTTGATCTTTGTCTTCGTGCTTGCTTTCATCGTCGAGTGGCTTTCGCATTGCCGATTGATCAAGGAGGATTCCAGCGCCGCGGCGGCGGGATTGATCCGGACTCTGTTGCACACGGTTAGGGTTGGATTGGCCTATTTAGTGATGCTTGCGGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTTGCTGTCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAAATCGGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGAAATCGATGATGAAGGAATGTGGAAATCTGCAATTGAATTGTGAAGCTTATGCCAAGTTATAACGGAAGGGGAATTGGTATTTGGAAATGCTTGGATTCAGATTCCGGGATAATTCGCTTGTAATTTTCTTCTTTCTCACAGTCACATTTCATCTTTTTCATTTGGATTCTTAATTTTAATTGTAAGGAAGAACTAAGAAGATATTCATCGAACTTTTAGAGATTATTGATAGGGTTAGGAAAAAGAAATGTTATTATCACTATTATTATAATTTATGAATTACCCTTTTTTTAGGGTTGTTAAGGACTCTGATTGGTATGTCATTTGGTTGTGTGGTTTTAGATTTACTGAACTCAGC

Coding sequence (CDS)

ATGGATGCCGCCGACAATTCTCACCACCACCATATGCACGGCATGGCGCCACCGCCGGCCTCCTCCGCCGCGTCGCCGGAGATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTTCATCGCTGGCCTGGCGGTCGCTCCGGTATGTACGCCTTGGCCTTGATCTTTGTCTTCGTGCTTGCTTTCATCGTCGAGTGGCTTTCGCATTGCCGATTGATCAAGGAGGATTCCAGCGCCGCGGCGGCGGGATTGATCCGGACTCTGTTGCACACGGTTAGGGTTGGATTGGCCTATTTAGTGATGCTTGCGGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTTGCTGTCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAAATCGGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGA

Protein sequence

MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAVGGHCLGFFFFGSRFFKKSGAASGKSSDLPPLSC

Homology

[Close]

BLAST of Tan0020563 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-40
Identity = 91/167 (54.49%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 9   HHHMHGMAPPPASSAASPEMM-------------HHKMMMHMTFFWGTNAEILFHRWPGG 68
           H HMHGM  P +SS++SP  M             H KMMMHMTFFWG N E+LF  WPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 69  RSGMYALALIFVFVLAFIVEWLSHCRLIK---EDSSAAAAGLIRTLLHTVRVGLAYLVML 128
            SGMYAL LIFVF LA + EWL+H  L++    DS+  AAGLI+T ++T+R+GLAYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 129 AVMSFNVGVFLVAVGGHCLGFFFFGSRFFKKSGAASGKSSDLPPLSC 160
           AVMSFN GVFLVA+ GH +GF  FGS+ F+ + +   K++ +PP  C
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT-SDDRKTNYVPPSGC 168

[Close]

BLAST of Tan0020563 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-37
Identity = 84/152 (55.26%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 9   HHHMHGMAPP-PASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFV 68
           H HMH M PP P+SS+ S     H MMMHMTFFWG N E+LF  WPG  SGMYAL LI +
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FVLAFIVEWLSHCRLIK-EDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAV 128
           F+LA I EWL+H  +++   S+  AAGL +T ++T++ GL+YLVMLAVMSFN GVF+VA+
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFFFFGSRFFKKSGAASGKSSDLPPLS 159
            G+ +GFF FGS  FKK       +  LPP S
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of Tan0020563 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-31
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 13  HGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFVFVLAF 72
           HG  PP + S+       + +MMHMTFFWG N EILF  WPG   GMY L LI VF+LA 
Sbjct: 3   HGNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAV 62

Query: 73  IVEWLSHCRLIK-EDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAVGGHCL 132
           IVEWL+H  +++   S++ A GL++T ++T++ GLAYLVMLAVMSFN GVF+VA+ G  +
Sbjct: 63  IVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAV 122

Query: 133 GFFFFGSRFFK 143
           GF  FGS  FK
Sbjct: 123 GFMLFGSTAFK 133

[Close]

BLAST of Tan0020563 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.4e-30
Identity = 78/134 (58.21%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 10  HHMHGMAPPPASSAASPEMMHHKMM--MHMTFFWGTNAEILFHRWPGGRSGMYALALIFV 69
           H M GM+PP A +AA   M   K M   HMTFFWG N+E+LF  WPG R GMYALALIFV
Sbjct: 6   HDMGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFV 65

Query: 70  FVLAFIVEWLSH-----CRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVF 129
           F LA IVE+L       C       + AA GL R  +HTVRVG+AYL+MLA+MSFN GVF
Sbjct: 66  FALAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVF 125

Query: 130 LVAVGGHCLGFFFF 137
           LVAV GH  GF  F
Sbjct: 126 LVAVAGHAAGFLAF 139

[Close]

BLAST of Tan0020563 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 30  HHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFVFVLAFIVEWLSHC---RLIKED 89
           H   ++H TF+WG N ++LF  WPG   GMYALALIFVF LAF+ EWL+ C     IK+ 
Sbjct: 25  HRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQG 84

Query: 90  SSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAVGGHCLGFFFFGSRFFK 143
           +   A    RT ++TV+ G +YLV+LAV+SFN GVFL A+ GH LGF  F  R F+
Sbjct: 85  ADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFR 140

[Close]

BLAST of Tan0020563 vs. NCBI nr
Match: KAA0031770.1 (copper transporter 1 [Cucumis melo var. makuwa] >TYJ97362.1 copper transporter 1 [Cucumis melo var. makuwa])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALI +FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAASGKSSDLPPLSC 160
           V LVA+GGHCLGFF FGSRFFK+S A SGKSSDLPPLSC
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVSGKSSDLPPLSC 159

[Close]

BLAST of Tan0020563 vs. NCBI nr
Match: KAE8653274.1 (hypothetical protein Csa_023259 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 6.0e-66
Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALIF+FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           V LVA+GGHCLGFF FGS+FFK+S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of Tan0020563 vs. NCBI nr
Match: XP_004145275.1 (copper transporter 1 [Cucumis sativus] >XP_031741185.1 copper transporter 1-like [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 6.0e-66
Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALIF+FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           V LVA+GGHCLGFF FGS+FFK+S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of Tan0020563 vs. NCBI nr
Match: XP_008457427.1 (PREDICTED: copper transporter 1 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 1.7e-65
Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALI +FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           V LVA+GGHCLGFF FGSRFFK+S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVS 148

[Close]

BLAST of Tan0020563 vs. NCBI nr
Match: KGN66186.2 (hypothetical protein Csa_019561 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 1.7e-65
Identity = 127/146 (86.99%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALIF+FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGA 147
           V LVA+GGHCLGFF FGS+FFK+S A
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEA 146

[Close]

BLAST of Tan0020563 vs. ExPASy TrEMBL
Match: A0A5A7SLZ1 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001730 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.1e-73
Identity = 139/159 (87.42%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALI +FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAASGKSSDLPPLSC 160
           V LVA+GGHCLGFF FGSRFFK+S A SGKSSDLPPLSC
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVSGKSSDLPPLSC 159

[Close]

BLAST of Tan0020563 vs. ExPASy TrEMBL
Match: A0A0A0LVF3 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526830 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.9e-66
Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALIF+FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           V LVA+GGHCLGFF FGS+FFK+S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of Tan0020563 vs. ExPASy TrEMBL
Match: A0A1S3C5M2 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497118 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.5e-66
Identity = 128/148 (86.49%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDAA  +H+HHMHGM PPP SS ASPEMMHHKMMMHMTFFWGTNAEILFHRWPG RSGMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALI +FVLAF+VEWL+HCRLIKEDSS AAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           V LVA+GGHCLGFF FGSRFFK+S A S
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVS 148

[Close]

BLAST of Tan0020563 vs. ExPASy TrEMBL
Match: A0A6J1KFM2 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493432 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.2e-65
Identity = 130/148 (87.84%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           M+A D +HHHHMHGMAPPPASSAASP M  H  MMHMTFFWGTNAEILF  WPG RSGMY
Sbjct: 1   MNATDETHHHHMHGMAPPPASSAASPGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALI +FVLAFIVEWLSH RLIKEDSSAAAAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFIVEWLSHSRLIKEDSSAAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           VFLVA+GGHCLGFFFFGSRFFK SGAAS
Sbjct: 121 VFLVAIGGHCLGFFFFGSRFFKNSGAAS 148

[Close]

BLAST of Tan0020563 vs. ExPASy TrEMBL
Match: A0A6J1G9U6 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452256 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 126/148 (85.14%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MDAADNSHHHHMHGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMY 60
           MDA D +HHHHM GMAPPPASSAAS  M  H  MMHMTFFWGTNAEILF  WPG RSGMY
Sbjct: 1   MDATDETHHHHMQGMAPPPASSAASSGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSGMY 60

Query: 61  ALALIFVFVLAFIVEWLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVG 120
           ALALIF+FVLAF+VEWLSH RLI+EDSS+ AAGLIRTL+HTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLSHSRLIREDSSSVAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAVGGHCLGFFFFGSRFFKKSGAAS 149
           VFLVA+GGHCLGFFFFGSRFFK SGAAS
Sbjct: 121 VFLVAIGGHCLGFFFFGSRFFKNSGAAS 148

[Close]

BLAST of Tan0020563 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 166.4 bits (420), Expect = 1.9e-41
Identity = 91/167 (54.49%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 9   HHHMHGMAPPPASSAASPEMM-------------HHKMMMHMTFFWGTNAEILFHRWPGG 68
           H HMHGM  P +SS++SP  M             H KMMMHMTFFWG N E+LF  WPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 69  RSGMYALALIFVFVLAFIVEWLSHCRLIK---EDSSAAAAGLIRTLLHTVRVGLAYLVML 128
            SGMYAL LIFVF LA + EWL+H  L++    DS+  AAGLI+T ++T+R+GLAYLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 129 AVMSFNVGVFLVAVGGHCLGFFFFGSRFFKKSGAASGKSSDLPPLSC 160
           AVMSFN GVFLVA+ GH +GF  FGS+ F+ + +   K++ +PP  C
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNT-SDDRKTNYVPPSGC 168

[Close]

BLAST of Tan0020563 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38
Identity = 84/152 (55.26%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 9   HHHMHGMAPP-PASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFV 68
           H HMH M PP P+SS+ S     H MMMHMTFFWG N E+LF  WPG  SGMYAL LI +
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FVLAFIVEWLSHCRLIK-EDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAV 128
           F+LA I EWL+H  +++   S+  AAGL +T ++T++ GL+YLVMLAVMSFN GVF+VA+
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFFFFGSRFFKKSGAASGKSSDLPPLS 159
            G+ +GFF FGS  FKK       +  LPP S
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of Tan0020563 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 135.2 bits (339), Expect = 4.6e-32
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 13  HGMAPPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFVFVLAF 72
           HG  PP + S+       + +MMHMTFFWG N EILF  WPG   GMY L LI VF+LA 
Sbjct: 3   HGNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAV 62

Query: 73  IVEWLSHCRLIK-EDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAVGGHCL 132
           IVEWL+H  +++   S++ A GL++T ++T++ GLAYLVMLAVMSFN GVF+VA+ G  +
Sbjct: 63  IVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAV 122

Query: 133 GFFFFGSRFFK 143
           GF  FGS  FK
Sbjct: 123 GFMLFGSTAFK 133

[Close]

BLAST of Tan0020563 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 30  HHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFVFVLAFIVEWLSHC---RLIKED 89
           H   ++H TF+WG N ++LF  WPG   GMYALALIFVF LAF+ EWL+ C     IK+ 
Sbjct: 25  HRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQG 84

Query: 90  SSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAVGGHCLGFFFFGSRFFK 143
           +   A    RT ++TV+ G +YLV+LAV+SFN GVFL A+ GH LGF  F  R F+
Sbjct: 85  ADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFR 140

[Close]

BLAST of Tan0020563 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 115.2 bits (287), Expect = 5.0e-26
Identity = 62/133 (46.62%), Postives = 82/133 (61.65%), Query Frame = 0


Query: 16  APPPASSAASPEMMHHKMMMHMTFFWGTNAEILFHRWPGGRSGMYALALIFVFVLAFIVE 75
           AP P+ S+       H  MMHMTFFWG   E+LF  WPG    MY + L  +FV++   E
Sbjct: 11  APAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSE 70

Query: 76  WLSHCRLIKEDSSAAAAGLIRTLLHTVRVGLAYLVMLAVMSFNVGVFLVAVGGHCLGFFF 135
            LS C  +K   ++   GL++T ++TVR  L+YLVMLAVMSFN GVF+ A+ G  LGF  
Sbjct: 71  CLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMI 130

Query: 136 FGSRFFKKSGAAS 149
           FGSR F+ + + S
Sbjct: 131 FGSRAFRATSSNS 143

The following BLAST results are available for this feature:

BLAST of Tan0020563 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39065	2.6e-40	54.49	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q9STG2	2.1e-37	55.26	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	6.5e-31	54.20	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q94EE4	9.4e-30	58.21	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]
Q8SAA5	3.1e-25	51.72	Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2	[more]

BLAST of Tan0020563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031770.1	1.5e-72	87.42	copper transporter 1 [Cucumis melo var. makuwa] >TYJ97362.1 copper transporter 1...	[more]
KAE8653274.1	6.0e-66	86.49	hypothetical protein Csa_023259 [Cucumis sativus]	[more]
XP_004145275.1	6.0e-66	86.49	copper transporter 1 [Cucumis sativus] >XP_031741185.1 copper transporter 1-like...	[more]
XP_008457427.1	1.7e-65	86.49	PREDICTED: copper transporter 1 [Cucumis melo]	[more]
KGN66186.2	1.7e-65	86.99	hypothetical protein Csa_019561 [Cucumis sativus]	[more]

BLAST of Tan0020563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLZ1	7.1e-73	87.42	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G0...	[more]
A0A0A0LVF3	2.9e-66	86.49	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_1G526830 PE=3 SV=1	[more]
A0A1S3C5M2	8.5e-66	86.49	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103497118 PE=3 SV=1	[more]
A0A6J1KFM2	3.2e-65	87.84	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111493432 PE=3 SV=1	[more]
A0A6J1G9U6	3.0e-63	85.14	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111452256 PE=3 SV=1	[more]

BLAST of Tan0020563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59030.1	1.9e-41	54.49	copper transporter 1	[more]
AT3G46900.1	1.5e-38	55.26	copper transporter 2	[more]
AT2G26975.1	4.6e-32	54.20	Ctr copper transporter family	[more]
AT2G37925.1	2.2e-26	51.72	copper transporter 4	[more]
AT5G59040.1	5.0e-26	46.62	copper transporter 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 37..81 e-value: 3.4E-8 score: 34.2 coord: 94..136 e-value: 3.1E-11 score: 44.0
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 6..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR12483:SF80	COPPER TRANSPORTER 6-LIKE	coord: 6..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020563.1	Tan0020563.1	mRNA
Tan0020563.2	Tan0020563.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030242	autophagy of peroxisome
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0016236	macroautophagy
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005770	late endosome
cellular_component	GO:0071561	nucleus-vacuole junction
cellular_component	GO:0034271	phosphatidylinositol 3-kinase complex, class III, type I
cellular_component	GO:0034272	phosphatidylinositol 3-kinase complex, class III, type II
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity
molecular_function	GO:0004674	protein serine/threonine kinase activity