Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACGCCTCGTCTGAATTTTTCCTGTCTTCTATCGGAGCACCTCACTTCAGCAGTCCTCCGTTAAATCAACTACTTAACCAGGTAACTTCGATAAAATTAGAGAGGGGAAACTTTCTACTGTGGAAGAATTTAGCTCTTTCCATCCTTCGGAGCTACAAACTCAAATGCCATCTCCTTGGGACCAAAGCTTGCCCAACCATGTTTCTACCTCAAGGATCTACCGAAGGAATTACAATTTCTGAAAGAGCATCCTCCTCAAGCTCAGAGCCATCGACTGTGATCAATCCACTGTATGAGTCTTGGGTCACTGTAGATCAGTTACTTGTCGGTTGGTTGTACAACTCCATGTCGTTAGAGGTAGCTACTCAGGTAATGGGGTGCAACATAACTAAAGACCTTTGGGATGCCATTCAAACCTTGTTTGGGGTCCAGTCCAGAGTTGAAGAGGATTTTCTGCGTCAAGTCTTCCAACAGACACGCAAAGGTAATATGAAAATGTCAGAATACTTACGAATCATGAAATGTCATGTTGAAAGTCTTGGTCAAGCAGGGAGTCCAGTGCCCACTAGGTCTCTAATTTCGCAGGTTCTACTTGGATTAGATGAAGAATACAACCCTATTATTGTTGGAATATAA
mRNA sequence
ATGGCCAACGCCTCGTCTGAATTTTTCCTGTCTTCTATCGGAGCACCTCACTTCAGCAGTCCTCCGTTAAATCAACTACTTAACCAGGTAACTTCGATAAAATTAGAGAGGGGAAACTTTCTACTGTGGAAGAATTTAGCTCTTTCCATCCTTCGGAGCTACAAACTCAAATGCCATCTCCTTGGGACCAAAGCTTGCCCAACCATGTTTCTACCTCAAGGATCTACCGAAGGAATTACAATTTCTGAAAGAGCATCCTCCTCAAGCTCAGAGCCATCGACTGTGATCAATCCACTGTATGAGTCTTGGGTAATGGGGTGCAACATAACTAAAGACCTTTGGGATGCCATTCAAACCTTGTTTGGGGTCCAGTCCAGAGTTGAAGAGGATTTTCTGCGTCAAGTCTTCCAACAGACACGCAAAGGTAATATGAAAATGTCAGAATACTTACGAATCATGAAATGTCATGTTGAAAGTCTTGGTCAAGCAGGGAGTCCAGTGCCCACTAGGTCTCTAATTTCGCAGGTTCTACTTGGATTAGATGAAGAATACAACCCTATTATTGTTGGAATATAA
Coding sequence (CDS)
ATGGCCAACGCCTCGTCTGAATTTTTCCTGTCTTCTATCGGAGCACCTCACTTCAGCAGTCCTCCGTTAAATCAACTACTTAACCAGGTAACTTCGATAAAATTAGAGAGGGGAAACTTTCTACTGTGGAAGAATTTAGCTCTTTCCATCCTTCGGAGCTACAAACTCAAATGCCATCTCCTTGGGACCAAAGCTTGCCCAACCATGTTTCTACCTCAAGGATCTACCGAAGGAATTACAATTTCTGAAAGAGCATCCTCCTCAAGCTCAGAGCCATCGACTGTGATCAATCCACTGTATGAGTCTTGGGTAATGGGGTGCAACATAACTAAAGACCTTTGGGATGCCATTCAAACCTTGTTTGGGGTCCAGTCCAGAGTTGAAGAGGATTTTCTGCGTCAAGTCTTCCAACAGACACGCAAAGGTAATATGAAAATGTCAGAATACTTACGAATCATGAAATGTCATGTTGAAAGTCTTGGTCAAGCAGGGAGTCCAGTGCCCACTAGGTCTCTAATTTCGCAGGTTCTACTTGGATTAGATGAAGAATACAACCCTATTATTGTTGGAATATAA
Protein sequence
MANASSEFFLSSIGAPHFSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHLLGTKACPTMFLPQGSTEGITISERASSSSSEPSTVINPLYESWVMGCNITKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPVPTRSLISQVLLGLDEEYNPIIVGI
Homology
BLAST of Tan0020535 vs. NCBI nr
Match:
KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 196.4 bits (498), Expect = 2.2e-46
Identity = 108/218 (49.54%), Postives = 137/218 (62.84%), Query Frame = 0
Query: 1 MANASSEFFLSSIGAPHFSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHL 60
MANA S+ + FS+PPLNQ+LNQ+ ++KL+R N+LLWK LAL IL+ YKL+ HL
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGHL 60
Query: 61 LGTKACPTMFLPQGSTEGITISERAS-----SSSSEPSTVINPLYESWV----------- 120
G CP+ F+ S+ T++E + +SSS ++N L+E WV
Sbjct: 61 TGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWLY 120
Query: 121 -----------MGCNITKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIM 180
MG +DLWDA Q FGVQSR EEDFLRQ+ Q TRKGN KM EYL +M
Sbjct: 121 NSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVM 180
Query: 181 KCHVESLGQAGSPVPTRSLISQVLLGLDEEYNPIIVGI 192
K +V++LGQ GSPVP R+LISQVLLGLDE YN +IV I
Sbjct: 181 KTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVI 218
BLAST of Tan0020535 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 192.2 bits (487), Expect = 4.1e-45
Identity = 103/197 (52.28%), Postives = 132/197 (67.01%), Query Frame = 0
Query: 18 FSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHLLGTKAC-PTMFLPQGST 77
F+SPPLNQLLNQ+TSIK++RGNFLLW+NLAL ILRSYKL +L G K C PT +P +
Sbjct: 22 FTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTP 81
Query: 78 EGITISERASSSSSEPSTVINPLYESW----------------------VMGCNITKDLW 137
I S+SS+ S +NP YE+W VMG + +++LW
Sbjct: 82 TNI-----EGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELW 141
Query: 138 DAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPVPTRSLIS 192
A+Q LFGVQSR E D+L+QVFQQT KG+++M EYL++MK H ++L AGS V R L+S
Sbjct: 142 TAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVS 201
BLAST of Tan0020535 vs. NCBI nr
Match:
TYJ96311.1 (uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 176.0 bits (445), Expect = 3.1e-40
Identity = 96/202 (47.52%), Postives = 124/202 (61.39%), Query Frame = 0
Query: 1 MANASSEFFLSSIGAPHFSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHL 60
MANA S+ + FS+PPLNQ+LNQ+ ++KL+R N+LLWK LAL IL+ YKL+ HL
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGHL 60
Query: 61 LGTKACPTMFLPQGSTEGITISERAS-----SSSSEPSTVINPLYESWV----------- 120
G CP+ F+ S+ T++E + +SSS ++N L+E WV
Sbjct: 61 TGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWLY 120
Query: 121 -----------MGCNITKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIM 176
MG +DLWDA Q FGVQSR EEDFLRQ+ Q TRKGN KM EYL +M
Sbjct: 121 NSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVM 180
BLAST of Tan0020535 vs. NCBI nr
Match:
XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida])
HSP 1 Score: 161.0 bits (406), Expect = 1.0e-35
Identity = 96/204 (47.06%), Postives = 122/204 (59.80%), Query Frame = 0
Query: 31 TSIKLERGNFLLWKNLALSILRSYKLKCHLLGTKACPTMF----------LPQGSTEGI- 90
T+IKL++ N+LLW+NLAL ILRSY+L+ HL G CP F +P G G+
Sbjct: 43 TTIKLDQENYLLWRNLALPILRSYRLEGHLTGEDPCPPRFSVATDQSTATVPPGDEAGLG 102
Query: 91 -------TISER---ASSSSSEPSTVINPLYES----------W------------VMGC 150
+++ + ++S+S P +NP YES W VMG
Sbjct: 103 GQYSGIASLTPQQGITTASNSSPVLQVNPFYESRTVVDQLLLGWLYNFMTAEVAMQVMGY 162
Query: 151 NITKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPV 192
K LW AIQ LFG+QSR ED+LRQVFQQT KG MKM EYLR+MK H ++LG GSPV
Sbjct: 163 ENYKYLWAAIQELFGLQSRAGEDYLRQVFQQTCKGAMKMPEYLRVMKTHSDNLGLTGSPV 222
BLAST of Tan0020535 vs. NCBI nr
Match:
KAA0067279.1 (uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa])
HSP 1 Score: 152.5 bits (384), Expect = 3.6e-33
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 0
Query: 18 FSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHLLGTKACPTMFLPQGSTE 77
F++P LNQ+LNQ+T+IKL+RGN+LLWK LAL IL+SYKL HL G C + +
Sbjct: 17 FTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLFGESPCLPKIIMLTTQP 76
Query: 78 GITISERA------SSSSSEPSTVINPLYESWV----------------------MGCNI 137
+I E A +SSSS +NP YE W+ MG
Sbjct: 77 NESIVENAGEPSQETSSSSTAVVTVNPKYERWITTDLLLLGWLYNSMTPEVTIQLMGFTN 136
Query: 138 TKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPVPT 175
KDLW+A Q LFG+QSR +EDFL Q FQ T+KGN+ M EYLR MK +V +LGQA S VP+
Sbjct: 137 AKDLWEATQDLFGIQSRAKEDFLHQTFQTTKKGNLNMEEYLRTMKNNVNNLGQADSLVPS 196
BLAST of Tan0020535 vs. ExPASy TrEMBL
Match:
A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 108/218 (49.54%), Postives = 137/218 (62.84%), Query Frame = 0
Query: 1 MANASSEFFLSSIGAPHFSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHL 60
MANA S+ + FS+PPLNQ+LNQ+ ++KL+R N+LLWK LAL IL+ YKL+ HL
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGHL 60
Query: 61 LGTKACPTMFLPQGSTEGITISERAS-----SSSSEPSTVINPLYESWV----------- 120
G CP+ F+ S+ T++E + +SSS ++N L+E WV
Sbjct: 61 TGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWLY 120
Query: 121 -----------MGCNITKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIM 180
MG +DLWDA Q FGVQSR EEDFLRQ+ Q TRKGN KM EYL +M
Sbjct: 121 NSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVM 180
Query: 181 KCHVESLGQAGSPVPTRSLISQVLLGLDEEYNPIIVGI 192
K +V++LGQ GSPVP R+LISQVLLGLDE YN +IV I
Sbjct: 181 KTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVI 218
BLAST of Tan0020535 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 2.0e-45
Identity = 103/197 (52.28%), Postives = 132/197 (67.01%), Query Frame = 0
Query: 18 FSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHLLGTKAC-PTMFLPQGST 77
F+SPPLNQLLNQ+TSIK++RGNFLLW+NLAL ILRSYKL +L G K C PT +P +
Sbjct: 22 FTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTP 81
Query: 78 EGITISERASSSSSEPSTVINPLYESW----------------------VMGCNITKDLW 137
I S+SS+ S +NP YE+W VMG + +++LW
Sbjct: 82 TNI-----EGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELW 141
Query: 138 DAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPVPTRSLIS 192
A+Q LFGVQSR E D+L+QVFQQT KG+++M EYL++MK H ++L AGS V R L+S
Sbjct: 142 TAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVS 201
BLAST of Tan0020535 vs. ExPASy TrEMBL
Match:
A0A5D3BCH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00140 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40
Identity = 96/202 (47.52%), Postives = 124/202 (61.39%), Query Frame = 0
Query: 1 MANASSEFFLSSIGAPHFSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHL 60
MANA S+ + FS+PPLNQ+LNQ+ ++KL+R N+LLWK LAL IL+ YKL+ HL
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGHL 60
Query: 61 LGTKACPTMFLPQGSTEGITISERAS-----SSSSEPSTVINPLYESWV----------- 120
G CP+ F+ S+ T++E + +SSS ++N L+E WV
Sbjct: 61 TGETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGWLY 120
Query: 121 -----------MGCNITKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIM 176
MG +DLWDA Q FGVQSR EEDFLRQ+ Q TRKGN KM EYL +M
Sbjct: 121 NSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLLVM 180
BLAST of Tan0020535 vs. ExPASy TrEMBL
Match:
A0A5A7VPY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001000 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 0
Query: 18 FSSPPLNQLLNQVTSIKLERGNFLLWKNLALSILRSYKLKCHLLGTKACPTMFLPQGSTE 77
F++P LNQ+LNQ+T+IKL+RGN+LLWK LAL IL+SYKL HL G C + +
Sbjct: 17 FTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLFGESPCLPKIIMLTTQP 76
Query: 78 GITISERA------SSSSSEPSTVINPLYESWV----------------------MGCNI 137
+I E A +SSSS +NP YE W+ MG
Sbjct: 77 NESIVENAGEPSQETSSSSTAVVTVNPKYERWITTDLLLLGWLYNSMTPEVTIQLMGFTN 136
Query: 138 TKDLWDAIQTLFGVQSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPVPT 175
KDLW+A Q LFG+QSR +EDFL Q FQ T+KGN+ M EYLR MK +V +LGQA S VP+
Sbjct: 137 AKDLWEATQDLFGIQSRAKEDFLHQTFQTTKKGNLNMEEYLRTMKNNVNNLGQADSLVPS 196
BLAST of Tan0020535 vs. ExPASy TrEMBL
Match:
A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 6.2e-31
Identity = 76/128 (59.38%), Postives = 88/128 (68.75%), Query Frame = 0
Query: 86 SSSSSEPSTVINPLYESW----------------------VMGCNITKDLWDAIQTLFGV 145
SSSS INPLYESW VMG DLW AIQ LFGV
Sbjct: 21 SSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGV 80
Query: 146 QSRVEEDFLRQVFQQTRKGNMKMSEYLRIMKCHVESLGQAGSPVPTRSLISQVLLGLDEE 192
QS+ EED+LRQVFQQTRKG++KM+++LR+MK H ++LGQAGSPVPTRSLISQVLLGLDEE
Sbjct: 81 QSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 140
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0026100.1 | 2.2e-46 | 49.54 | uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa] | [more] |
XP_022151683.1 | 4.1e-45 | 52.28 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
TYJ96311.1 | 3.1e-40 | 47.52 | uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa] | [more] |
XP_038902487.1 | 1.0e-35 | 47.06 | uncharacterized protein LOC120089143 [Benincasa hispida] | [more] |
KAA0067279.1 | 3.6e-33 | 45.95 | uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SIT7 | 1.1e-46 | 49.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1DCW4 | 2.0e-45 | 52.28 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A5D3BCH9 | 1.5e-40 | 47.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VPY0 | 1.8e-33 | 45.95 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1D5J0 | 6.2e-31 | 59.38 | uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |