Tan0020445 (gene) Snake gourd v1

Overview
NameTan0020445
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
LocationLG01: 65297740 .. 65299306 (+)
RNA-Seq ExpressionTan0020445
SyntenyTan0020445
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTTAGTGAGGCTTCAGAACTTTGATCCTCTTGTGGACGTAACATCCTTATTCGCTCAAATTGCTAAGGATGCGGACGTGAAATTGACACCGTCAATGTTCTTCATAATCGCATCGCACTCTTCCCCTCGCTTCGTTGCAACCCTCCAAATTTCACGTCGTTTCTTCACAAACTATACCGTCGATCTGAATCACACTTCACAGGTTTCCCTTCAATCCTTCCACGATGCTTTGTTGGAGGGCGGAAGTTTCTCTTCAATGACAATCCATCTTCTTGACAAAATTAACAAAATGACTCTTCGATTTGAGGCTTCACCTGGTTACTATCTCTACCATCTTTCTTGCCTTCACAATATATAATCAATTATCTTCGTTCTAATTACAAGAATTTATTTTCTCATTTCTTTATCAGATCTTGATTGATTCTTATATTTATTTGTTTTTAAATTGTTAATATCACTTTTAGGGAATGTGCCACCGTTGTATCATGAATTGCCATTGTCTCCTCCGGAAGGAGAGGCTTTAGGCCATGTTGAACATGGAAAATTTTTCACTGTTAATTCTAAAGAATTAAGACGTATTATCAAAGAATTACCTCTCTTTCAAGATGATTCAGGTATTTTTAATTACTCTTCTTTTTTCTTTCTTATTTACTTCAAAGAAACTGGTGCATGTTTTTAATTATGTGTTTTATATGTCACAGTTTGTGTTACGGTAACAAATTCACAACTCAAGTTCTCTATTGCATCCAAGGAGATTATTCTTACCAAAGAGGTATTTATTCATTTACTAATTATATATCCCAATATTATAGCCAGATGAATTTTTTAACCATGTTTTAATTAAGGGGAGTGGTGTTTCTGTCCATACAATTTTTTTTTTTAAAAAAATAATTATTAAATATTTCCTCTAAATGTATATATATCCTCTTTTGGTTTAAGCTCTTCAAACGTTACCTTTGTTCCTGAAATTTACGTAAAAATCATTTTAGACATTGAGACATTGGCCTTTTCTTTATATATAAAAGTTGTTGGATCTAAATTCTTCGTTTGTTCATTTAATTGGAGGACAAATATTTGAGTAGATAAGTTTTTGAAGCGTGCCTTAGAAGCTGAAGGTGTAAAGTTTCAAAATAAAATTTGACTTTTATTAAATGATGAACATAACTGAAATGAGTTTTTATTCATAGATTAGAAATTAAAATATATATATTGAAAATCGCATAGGGTAAAATAGAAAGGTTAAAAGAACATGATTTAAAATAAAAATAAGCGTAAAAGTTGTAGAATGAAAATGGGTTTTAAAACTTGCACTTTTGTTAAAACTTGTTATTGATGAATAAAGTTGGTTGGTTGATGTTGTACAGGGTGGACATTGTAAAATTGTAGGTTTTGAAGAAGAAGTTGAAACTCAACTCCAAATCGTTCTCCGCCCCATGTTATTTTTCCTTAATTTGACTTATAAAGCCAATAGGGTATGGTTTTATAAGACAACTAATTCCCGTAGTCTAATCAGTGTTCCAGCTTTTGGAGTGTATGGTCAATATGTGATCCATTTCCCCTAG

mRNA sequence

ATGTACTTAGTGAGGCTTCAGAACTTTGATCCTCTTGTGGACGTAACATCCTTATTCGCTCAAATTGCTAAGGATGCGGACGTGAAATTGACACCGTCAATGTTCTTCATAATCGCATCGCACTCTTCCCCTCGCTTCGTTGCAACCCTCCAAATTTCACGTCGTTTCTTCACAAACTATACCGTCGATCTGAATCACACTTCACAGGTTTCCCTTCAATCCTTCCACGATGCTTTGTTGGAGGGCGGAAGTTTCTCTTCAATGACAATCCATCTTCTTGACAAAATTAACAAAATGACTCTTCGATTTGAGGCTTCACCTGGGAATGTGCCACCGTTGTATCATGAATTGCCATTGTCTCCTCCGGAAGGAGAGGCTTTAGGCCATGTTGAACATGGAAAATTTTTCACTGTTAATTCTAAAGAATTAAGACGTATTATCAAAGAATTACCTCTCTTTCAAGATGATTCAGTTTGTGTTACGGTAACAAATTCACAACTCAAGTTCTCTATTGCATCCAAGGAGATTATTCTTACCAAAGAGGGTGGACATTGTAAAATTGTAGGTTTTGAAGAAGAAGTTGAAACTCAACTCCAAATCGTTCTCCGCCCCATGTTATTTTTCCTTAATTTGACTTATAAAGCCAATAGGGTATGGTTTTATAAGACAACTAATTCCCGTAGTCTAATCAGTGTTCCAGCTTTTGGAGTGTATGGTCAATATGTGATCCATTTCCCCTAG

Coding sequence (CDS)

ATGTACTTAGTGAGGCTTCAGAACTTTGATCCTCTTGTGGACGTAACATCCTTATTCGCTCAAATTGCTAAGGATGCGGACGTGAAATTGACACCGTCAATGTTCTTCATAATCGCATCGCACTCTTCCCCTCGCTTCGTTGCAACCCTCCAAATTTCACGTCGTTTCTTCACAAACTATACCGTCGATCTGAATCACACTTCACAGGTTTCCCTTCAATCCTTCCACGATGCTTTGTTGGAGGGCGGAAGTTTCTCTTCAATGACAATCCATCTTCTTGACAAAATTAACAAAATGACTCTTCGATTTGAGGCTTCACCTGGGAATGTGCCACCGTTGTATCATGAATTGCCATTGTCTCCTCCGGAAGGAGAGGCTTTAGGCCATGTTGAACATGGAAAATTTTTCACTGTTAATTCTAAAGAATTAAGACGTATTATCAAAGAATTACCTCTCTTTCAAGATGATTCAGTTTGTGTTACGGTAACAAATTCACAACTCAAGTTCTCTATTGCATCCAAGGAGATTATTCTTACCAAAGAGGGTGGACATTGTAAAATTGTAGGTTTTGAAGAAGAAGTTGAAACTCAACTCCAAATCGTTCTCCGCCCCATGTTATTTTTCCTTAATTTGACTTATAAAGCCAATAGGGTATGGTTTTATAAGACAACTAATTCCCGTAGTCTAATCAGTGTTCCAGCTTTTGGAGTGTATGGTCAATATGTGATCCATTTCCCCTAG

Protein sequence

MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNYTVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLSPPEGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDSVCVTVTNSQLKFSIASKEIILTKEGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKTTNSRSLISVPAFGVYGQYVIHFP
Homology
BLAST of Tan0020445 vs. NCBI nr
Match: KAG7013723.1 (hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.3 bits (874), Expect = 7.1e-90
Identity = 166/246 (67.48%), Postives = 207/246 (84.15%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNY 60
           M+LV+LQ F+PL+D TSL  QI+KDADV+ T  M  +IASH+SPRFVATLQ+S R FTNY
Sbjct: 1   MFLVQLQQFEPLLDATSLLTQISKDADVRFTAFMLSLIASHTSPRFVATLQMSCRLFTNY 60

Query: 61  TVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLS 120
           +VD  ++S+VSL+SFHDA+L+GGSFSSM+IH+L+   +M LR+E    N PPL+ ELPLS
Sbjct: 61  SVDHYYSSKVSLESFHDAMLDGGSFSSMSIHVLESRQQMILRYENPSSNDPPLHLELPLS 120

Query: 121 PPEGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDSVCVTVTNSQLKFSIASKEIILTK 180
           PP+ E+LG VE+GKFFTVNSK LR+IIKELPLF DD V V  T++++KFSIASKEI +TK
Sbjct: 121 PPQAESLGQVEYGKFFTVNSKVLRKIIKELPLFHDDLVRVAATSTRVKFSIASKEITVTK 180

Query: 181 EGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKTTNSRSLISVPAFGVYGQ 240
           E G+C+IVG+E E ET+L I  RPM+FFLN TYKANRVWFYKTTNS+S+ISVPAFG+YGQ
Sbjct: 181 ESGNCRIVGYEGEDETELHITFRPMMFFLNFTYKANRVWFYKTTNSQSVISVPAFGMYGQ 240

Query: 241 YVIHFP 247
           YV++FP
Sbjct: 241 YVVYFP 246

BLAST of Tan0020445 vs. NCBI nr
Match: XP_038875055.1 (uncharacterized protein LOC120067580 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 3.1e-85
Identity = 165/251 (65.74%), Postives = 203/251 (80.88%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNY 60
           M+LV+L NF+PL+D TS  AQI+  ADVK TP  F++IA + SPRFVATLQ+S++ FTNY
Sbjct: 1   MFLVKLTNFEPLLDATSYLAQISNYADVKFTPLEFYLIAPYPSPRFVATLQLSQKCFTNY 60

Query: 61  TVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLS 120
           +VD  HTS+V L+SFHDA+L+GGSF+SMTIHLL+K N+M LRF+     +PPL+HEL  S
Sbjct: 61  SVDHEHTSKVDLESFHDAILDGGSFASMTIHLLEKPNQMILRFQTPSSEIPPLHHELTFS 120

Query: 121 PP---EGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDS-VCVTVTNSQLKFSIASKEI 180
           PP   +    G +E GKFF V S+ LRRIIKELP+FQDDS VCV VT+SQ+KFSIASKEI
Sbjct: 121 PPQLADNNIGGQLEEGKFFIVKSEALRRIIKELPIFQDDSVVCVGVTSSQIKFSIASKEI 180

Query: 181 ILTKEGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKT-TNSRSLISVPAF 240
           +L  +  HC+IVGFEEEVETQ QI+LRPMLFFLN TYKAN+VWFYKT  NS S+++VPAF
Sbjct: 181 VLKAQ--HCRIVGFEEEVETQFQIILRPMLFFLNFTYKANKVWFYKTKNNSYSVMAVPAF 240

Query: 241 GVYGQYVIHFP 247
           G+ GQYVI+FP
Sbjct: 241 GILGQYVIYFP 249

BLAST of Tan0020445 vs. NCBI nr
Match: XP_008464344.1 (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 1.7e-83
Identity = 164/253 (64.82%), Postives = 206/253 (81.42%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKD-ADVKLTPSMFFIIASHSSPRFVATLQISRRFFTN 60
           M+LV+L+NFDPL+D TS  AQI+ D AD+K TPS FFIIASH SPRF+ATLQ+S ++FT 
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YTVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPL 120
           ++VD +H+S+VSL+SFHDA+L+GGSF+SMTIHLLDK N+M LRF+     + PL+HEL L
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTL 120

Query: 121 SPPEGE----ALGHVEHGKFFTVNSKELRRIIKELPLFQDDS-VCVTVTNSQLKFSIASK 180
           SPP+ E        ++  K+F V SK LRRIIK+LP+FQ+DS + V VTNS++KFSIASK
Sbjct: 121 SPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASK 180

Query: 181 EIILTKEGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKT-TNSRSLISVP 240
           EIILT EG HCKI GFEEEVETQ QI+L PM+FFLN TYKANRVWFYKT  N+ +L+ VP
Sbjct: 181 EIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVP 240

Query: 241 AFGVYGQYVIHFP 247
           A+G++GQYVI+FP
Sbjct: 241 AYGIFGQYVIYFP 252

BLAST of Tan0020445 vs. NCBI nr
Match: XP_008458682.1 (PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 1.1e-82
Identity = 156/217 (71.89%), Postives = 184/217 (84.79%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNY 60
           M+LVRL+ F+PL+D TSL AQ+AKDADVK TP M  II S+ SP+FVATLQ+SRR FTN+
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 61  TVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLS 120
           +VD N +S+VSLQ FHDA+L+GGSFSSMTIHLLD  N+M LRFE    +VPPL+HEL LS
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120

Query: 121 PPEGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDSVCVTVTNSQLKFSIASKEIILTK 180
           PP+ E LG VE+G FFTV S+ELRRIIKELPLF  D+V VTVT SQ+KFSI SKEIILTK
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTK 180

Query: 181 EGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANR 218
           EGGHCKIVG+E EVET+LQ+VLRPM+FFLN TY+AN+
Sbjct: 181 EGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANK 217

BLAST of Tan0020445 vs. NCBI nr
Match: XP_031743957.1 (uncharacterized protein LOC116404737 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 147/253 (58.10%), Postives = 190/253 (75.10%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIA-KDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTN 60
           M+LV+L  F+PL+D T   A  +  +A VK TP   F+I S+  P F+ATLQ+S R+FTN
Sbjct: 1   MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTN 60

Query: 61  YTVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPL 120
           ++VD  H+S+VSL+SFHDA+L+GG FS+M+IHLLDK N+M LRF+     + PL+ EL L
Sbjct: 61  FSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQMILRFDTPSSQIQPLHRELTL 120

Query: 121 SPPEGE--ALGHVEHG--KFFTVNSKELRRIIKELPLFQDDS-VCVTVTNSQLKFSIASK 180
           SPP+ E   +G  E    KFF V SK LRR+IKELP+FQ+DS +CV VT SQ+KFSIAS 
Sbjct: 121 SPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASH 180

Query: 181 EIILTKEGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKT-TNSRSLISVP 240
           +I+ + EG HC+I GFEEEVETQ QI L PMLFFLN TY+A+RVWFYKT  N+ +++ VP
Sbjct: 181 DIVFS-EGDHCRIEGFEEEVETQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVP 240

Query: 241 AFGVYGQYVIHFP 247
           AFG+YGQY I+FP
Sbjct: 241 AFGIYGQYAIYFP 252

BLAST of Tan0020445 vs. ExPASy TrEMBL
Match: A0A1S3CL88 (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 8.2e-84
Identity = 164/253 (64.82%), Postives = 206/253 (81.42%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKD-ADVKLTPSMFFIIASHSSPRFVATLQISRRFFTN 60
           M+LV+L+NFDPL+D TS  AQI+ D AD+K TPS FFIIASH SPRF+ATLQ+S ++FT 
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YTVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPL 120
           ++VD +H+S+VSL+SFHDA+L+GGSF+SMTIHLLDK N+M LRF+     + PL+HEL L
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTL 120

Query: 121 SPPEGE----ALGHVEHGKFFTVNSKELRRIIKELPLFQDDS-VCVTVTNSQLKFSIASK 180
           SPP+ E        ++  K+F V SK LRRIIK+LP+FQ+DS + V VTNS++KFSIASK
Sbjct: 121 SPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASK 180

Query: 181 EIILTKEGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKT-TNSRSLISVP 240
           EIILT EG HCKI GFEEEVETQ QI+L PM+FFLN TYKANRVWFYKT  N+ +L+ VP
Sbjct: 181 EIILT-EGRHCKIEGFEEEVETQFQIILCPMMFFLNFTYKANRVWFYKTKNNAYTLMVVP 240

Query: 241 AFGVYGQYVIHFP 247
           A+G++GQYVI+FP
Sbjct: 241 AYGIFGQYVIYFP 252

BLAST of Tan0020445 vs. ExPASy TrEMBL
Match: A0A1S3C8J1 (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 5.3e-83
Identity = 156/217 (71.89%), Postives = 184/217 (84.79%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNY 60
           M+LVRL+ F+PL+D TSL AQ+AKDADVK TP M  II S+ SP+FVATLQ+SRR FTN+
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNF 60

Query: 61  TVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLS 120
           +VD N +S+VSLQ FHDA+L+GGSFSSMTIHLLD  N+M LRFE    +VPPL+HEL LS
Sbjct: 61  SVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDVPPLHHELALS 120

Query: 121 PPEGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDSVCVTVTNSQLKFSIASKEIILTK 180
           PP+ E LG VE+G FFTV S+ELRRIIKELPLF  D+V VTVT SQ+KFSI SKEIILTK
Sbjct: 121 PPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTK 180

Query: 181 EGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANR 218
           EGGHCKIVG+E EVET+LQ+VLRPM+FFLN TY+AN+
Sbjct: 181 EGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANK 217

BLAST of Tan0020445 vs. ExPASy TrEMBL
Match: A0A6J1KIW5 (uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.0e-65
Identity = 129/247 (52.23%), Postives = 182/247 (73.68%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNY 60
           M+LVRL+NF PLVD TS  AQIA+++D+  TP    +  S  SPRF+ATLQI  + FT Y
Sbjct: 4   MFLVRLKNFRPLVDGTSRLAQIARESDIIFTPLSLKLTTSRPSPRFIATLQIFHQCFTVY 63

Query: 61  TVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLS 120
           +V+++H S++SL+S HDALL+ GS S+MTIHLL+  N M LRFE +P + P L H+  L 
Sbjct: 64  SVNIDHCSRISLESLHDALLDCGSSSAMTIHLLENTNLMVLRFE-TPNHEPQLRHDFVLL 123

Query: 121 PPEGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDSVCVTVTNSQLKFSIASKEIILTK 180
           PP+ +++  +E+ K   ++S++LR++IKELPLF  DSVCVTVT+S+++FSIAS+E+I  K
Sbjct: 124 PPQEQSIEEIEYSKSLALDSRDLRQVIKELPLFHGDSVCVTVTSSRVRFSIASRELIFKK 183

Query: 181 EGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKT-TNSRSLISVPAFGVYG 240
           E G C+I+G + +  T+ +IVL PMLFFLNLTY    VWF+KT TN+  ++  P F ++ 
Sbjct: 184 EKGRCEILGHDGDAVTEFRIVLYPMLFFLNLTYDVQTVWFHKTITNTHDVMIFPVFEIFA 243

Query: 241 QYVIHFP 247
           QYVI+FP
Sbjct: 244 QYVIYFP 249

BLAST of Tan0020445 vs. ExPASy TrEMBL
Match: A0A5D3DZ07 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1810G00070 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.3e-65
Identity = 135/213 (63.38%), Postives = 171/213 (80.28%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKD-ADVKLTPSMFFIIASHSSPRFVATLQISRRFFTN 60
           M+LV+L+NFDPL+D TS  AQI+ D AD+K TPS FFIIASH SPRF+ATLQ+S ++FT 
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YTVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPL 120
           ++VD +H+S+VSL+SFHDA+L+GGSF+SMTIHLLDK N+M LRF+     + PL+HEL L
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSEIQPLHHELTL 120

Query: 121 SPPEGE----ALGHVEHGKFFTVNSKELRRIIKELPLFQDDS-VCVTVTNSQLKFSIASK 180
           SPP+ E        ++  K+F V SK LRRIIK+LP+FQ+DS + V VTNS++KFSIASK
Sbjct: 121 SPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSIISVDVTNSRVKFSIASK 180

Query: 181 EIILTKEGGHCKIVGFEEEVETQLQIVLRPMLF 208
           EIILT EG HCKI GFEEEVETQ QI+L PM++
Sbjct: 181 EIILT-EGRHCKIEGFEEEVETQFQIILCPMIY 212

BLAST of Tan0020445 vs. ExPASy TrEMBL
Match: A0A6J1KZ05 (uncharacterized protein LOC111498887 OS=Cucurbita maxima OX=3661 GN=LOC111498887 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.1e-64
Identity = 130/245 (53.06%), Postives = 177/245 (72.24%), Query Frame = 0

Query: 1   MYLVRLQNFDPLVDVTSLFAQIAKDADVKLTPSMFFIIASHSSPRFVATLQISRRFFTNY 60
           M+LVRL +FDPL + TSL AQI+ +AD+K + S F +I S+ S RFVAT QIS RFF NY
Sbjct: 1   MFLVRLHHFDPLREATSLLAQISNEADLKFSSSKFSLITSYPSRRFVATFQISHRFFANY 60

Query: 61  TVDLNHTSQVSLQSFHDALLEGGSFSSMTIHLLDKINKMTLRFEASPGNVPPLYHELPLS 120
           +VD NH+S+VSLQSF+DA+ +G  FSSMTIH  +  ++M L+FE+S      ++  L LS
Sbjct: 61  SVDRNHSSRVSLQSFYDAMYDGIFFSSMTIHFPETTSRMVLQFESSNHTKLKMHRVLKLS 120

Query: 121 PPEGEALGHVEHGKFFTVNSKELRRIIKELPLFQDDSVCVTVTNSQLKFSIASKEIILTK 180
           P + E LG ++H +FF++ S++ R II  LP F ++S+ V++T+S++KF  AS+E ILTK
Sbjct: 121 PSQEEELGQIQHDRFFSIISQDFRDIITGLPSFPNNSIFVSLTSSRVKFCCASEERILTK 180

Query: 181 EGGHCKIVGFEEEVETQLQIVLRPMLFFLNLTYKANRVWFYKTTNSRSLISVPAFGVYGQ 240
           EGG C I+G+E E E   QI L P  FF NL+Y A R+WFYKT +SR +I VPAFG+  Q
Sbjct: 181 EGGRCAIIGYEGEAEIVFQINLNPKWFFFNLSYGAYRIWFYKTIDSRCVIFVPAFGLNAQ 240

Query: 241 YVIHF 246
           YVI+F
Sbjct: 241 YVIYF 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7013723.17.1e-9067.48hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038875055.13.1e-8565.74uncharacterized protein LOC120067580 [Benincasa hispida][more]
XP_008464344.11.7e-8364.82PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo][more]
XP_008458682.11.1e-8271.89PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo][more]
XP_031743957.11.1e-7158.10uncharacterized protein LOC116404737 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A1S3CL888.2e-8464.82uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=... [more]
A0A1S3C8J15.3e-8371.89uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=... [more]
A0A6J1KIW51.0e-6552.23uncharacterized protein LOC111494874 OS=Cucurbita maxima OX=3661 GN=LOC111494874... [more]
A0A5D3DZ071.3e-6563.38LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1KZ051.1e-6453.06uncharacterized protein LOC111498887 OS=Cucurbita maxima OX=3661 GN=LOC111498887... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.70.10.10coord: 1..243
e-value: 1.2E-22
score: 82.5
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 3..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0020445.1Tan0020445.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane