Tan0020327 (gene) Snake gourd v1

Overview
NameTan0020327
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein CHLORORESPIRATORY REDUCTION 6, chloroplastic
LocationLG09: 67065919 .. 67067752 (+)
RNA-Seq ExpressionTan0020327
SyntenyTan0020327
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCAATTTCCGGAGCAAGAGCATGAAGATAAACCAGATGGACGCCTCCGTCTCCAACCGTCTAGTATTTTTCACACTTTATCGTCTCCATGGCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCATTAATCACCCATCTCGATTACTCATTTCATCGCGTTTTTGCAGACCCATTTCAGATTCTTCGCCGTCTTGTCTTATTTCCAGCTCTTTTCGGCAGCGACGCCAAGTAGCTGCCTCCGTCGCCTTCAATCCATCGGGAAATTTTGACCTCTCTTTGCAAGATGATGAAGATGGTAACTCCTCAAACTTGTTCTTCAGTAATCAGTTTCTGAATTTGTTCTGTACCCATCACGATTGCGCATTTCAGAAATAGCAGAAATCAGAATTGTGGGGATTGGGGAAGGGGGAAAATTTTTCTTTTCAATTGATGACCATTGAATGAACATCGTAAGTTGATTATTTGGATAGGCATATAATTAGTCATTGGAATAGAATTTCCCTGTTCTTTGATGCTCAGCTTCCATTTTCTGGATGATGAATGATGATATTCAAATGATTCATTGCTATCTTTTGGAGAGAAGGAAAATATAATTCATTAGGGCTGATTTTACTCACATTGTCCAGTTCTTTCTTTCCCTATAAATGGTATGGAAACAAACAATAGAGAAGGAAGAACAATTGTGGTTATAATTAGGGAGTTCTTAAATTTTGATGAGTTTTTGCTGGTTGTTATAAACAGATTCTCCTAAAGTTGCACCTCCAATGCCACCTACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTTGTCGCCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAAGTTTTGGGGTGTTGATCTGTTAATATCATTGTTTTGAAGTTAGTTCTGTGATCCCTGATGAGTTCTCTTTCCTAGTATTGTCACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACCATCAATTATACCCGAGAAGATCCTTACGATCGACGAGAACTATCTGAATATCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTATCCATGGCTACCTGTCCTGTTAGACTGGAGAGCTGGAGAGCTCGCTCGCTACGCAGCCATGCTCGTTCCTCACCAGGTGATGCTAGTGATGGAATGTTATGAAAAAATCCAAAAATGTTTATATCAAGGAGTGTGAGAGAGGTGTGGAACACTTGTACATCAACTTATTGTTGGGATCTTTCTGATTGCAGATAAGTATGAGGATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTATGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACAGCTGATATGGCTAGGATGATTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTTCCCCTCCATGAAAGACGAGACCGAGCTCGAAACTCCTCTTCGATCGATCCTTTGAATCGATTTGAAAACTGGTATTATGCTCTCTTATGGAACTCTCACAATTGTAATCATATTTGTTTCTAATTAGAGTTGTAACCCTGTAATTGTATGTTCTCAAATCATCATAACTTATTACTGATGCAAGAATAGTTGAGTTGTGGAGTCATGAAAAAATGTTTGTTAAAAAGAAAAAAAAAATAGATGAATTCGTGTACTGTATGTTTCAACTTCCTGAAAGTCAACTTTTTTTTTTTTTTGTCTTTAAAAACGCCTAAATTTGGGGGATTTTTTTACCCAATTA

mRNA sequence

TAGCAATTTCCGGAGCAAGAGCATGAAGATAAACCAGATGGACGCCTCCGTCTCCAACCGTCTAGTATTTTTCACACTTTATCGTCTCCATGGCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCATTAATCACCCATCTCGATTACTCATTTCATCGCGTTTTTGCAGACCCATTTCAGATTCTTCGCCGTCTTGTCTTATTTCCAGCTCTTTTCGGCAGCGACGCCAAGTAGCTGCCTCCGTCGCCTTCAATCCATCGGGAAATTTTGACCTCTCTTTGCAAGATGATGAAGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCTACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTTGTCGCCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTACTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACCATCAATTATACCCGAGAAGATCCTTACGATCGACGAGAACTATCTGAATATCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTATCCATGGCTACCTGTCCTGTTAGACTGGAGAGCTGGAGAGCTCGCTCGCTACGCAGCCATGCTCGTTCCTCACCAGATAAGTATGAGGATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTATGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACAGCTGATATGGCTAGGATGATTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTTCCCCTCCATGAAAGACGAGACCGAGCTCGAAACTCCTCTTCGATCGATCCTTTGAATCGATTTGAAAACTGGTATTATGCTCTCTTATGGAACTCTCACAATTGTAATCATATTTGTTTCTAATTAGAGTTGTAACCCTGTAATTGTATGTTCTCAAATCATCATAACTTATTACTGATGCAAGAATAGTTGAGTTGTGGAGTCATGAAAAAATGTTTGTTAAAAAGAAAAAAAAAATAGATGAATTCGTGTACTGTATGTTTCAACTTCCTGAAAGTCAACTTTTTTTTTTTTTTGTCTTTAAAAACGCCTAAATTTGGGGGATTTTTTTACCCAATTA

Coding sequence (CDS)

ATGGCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCATTAATCACCCATCTCGATTACTCATTTCATCGCGTTTTTGCAGACCCATTTCAGATTCTTCGCCGTCTTGTCTTATTTCCAGCTCTTTTCGGCAGCGACGCCAAGTAGCTGCCTCCGTCGCCTTCAATCCATCGGGAAATTTTGACCTCTCTTTGCAAGATGATGAAGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCTACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTTGTCGCCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTACTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACCATCAATTATACCCGAGAAGATCCTTACGATCGACGAGAACTATCTGAATATCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTATCCATGGCTACCTGTCCTGTTAGACTGGAGAGCTGGAGAGCTCGCTCGCTACGCAGCCATGCTCGTTCCTCACCAGATAAGTATGAGGATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTATGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAGACAGCTGATATGGCTAGGATGATTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTTCCCCTCCATGA

Protein sequence

MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPSGNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPKQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGDELFDLIDQHPVSPP
Homology
[Close]
BLAST of Tan0020327 vs. ExPASy Swiss-Prot
Match: O82258 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.2e-88
Identity = 167/253 (66.01%), Postives = 199/253 (78.66%), Query Frame = 0 

Query: 1   MATPAIKPLLP-LSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNP 60
           MAT A+  LLP L PS  H S   +      P  +++  C+     R+   VA SVAFNP
Sbjct: 1   MATKAV--LLPWLIPSPRHVSLFPVVQ---LPALETAGWCVRK---RRAEDVAVSVAFNP 60

Query: 61  SGNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISP---LA 120
           SGNFD+S  +++ DS KV PPMPPT GR++VVIDND+I RLDLS FQ+  GI SP     
Sbjct: 61  SGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGV 120

Query: 121 TEPKQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELA 180
            EPK++L+RTIGFTINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELA
Sbjct: 121 AEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELA 180

Query: 181 RYAAMLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGF 240
           RYAAMLVPHQ+S+RMG+VFNPEALELF+M KVF+VY WLK+H +PKPRLKT+DMARM+GF
Sbjct: 181 RYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGF 240

Query: 241 GIGDELFDLIDQH 250
           GIGDELFDLID +
Sbjct: 241 GIGDELFDLIDHN 245

[Close]
BLAST of Tan0020327 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 232/254 (91.34%), Postives = 240/254 (94.49%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS NHPSR  IS  FCRPISDSSPSC I SS RQRRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDDEDDSPKV+PPMPPTEGRFDVVIDND I  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLK+HDIPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]
BLAST of Tan0020327 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 469.2 bits (1206), Expect = 2.3e-128
Identity = 230/254 (90.55%), Postives = 239/254 (94.09%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS NHPSR  IS  FCRPISDSSP C I +S RQRRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDDEDDS KV+PPMPPTEGRFDVVIDND I  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLKQHDIPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]
BLAST of Tan0020327 vs. NCBI nr
Match: XP_038876902.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 467.6 bits (1202), Expect = 6.8e-128
Identity = 229/254 (90.16%), Postives = 240/254 (94.49%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+T AIKP LPL PS NHPSR  IS  FCRPISDSSPS  IS+S R RRQV+ASVAFNPS
Sbjct: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           GNFDLSLQDD+DDSPKVAPPMPPTEGRFDVVIDNDAI RLDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           ML+PHQISMRMGIVFNPEALELF+MKKVFIVYSWLK+H+IPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]
BLAST of Tan0020327 vs. NCBI nr
Match: KAG6589804.1 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 229/254 (90.16%), Postives = 238/254 (93.70%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS NH SR  IS  FCRPISDSSP C I +S RQRRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHSSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDDEDDS KV+PPMPPTEGRFDVVIDND I  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLKQHDIPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]
BLAST of Tan0020327 vs. NCBI nr
Match: XP_023515428.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125
Identity = 227/254 (89.37%), Postives = 236/254 (92.91%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS  HPSR  IS  FCRP SDSS  C I +S RQRRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSSIHPSRSPISWSFCRPFSDSSSFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDDEDDS KV+PPMPPTEGRFDVVIDND I  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLKQHDIPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]
BLAST of Tan0020327 vs. ExPASy TrEMBL
Match: A0A6J1JFH1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485264 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.8e-130
Identity = 232/254 (91.34%), Postives = 240/254 (94.49%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS NHPSR  IS  FCRPISDSSPSC I SS RQRRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDDEDDSPKV+PPMPPTEGRFDVVIDND I  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLK+HDIPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]
BLAST of Tan0020327 vs. ExPASy TrEMBL
Match: A0A6J1E1R8 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430041 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128
Identity = 230/254 (90.55%), Postives = 239/254 (94.09%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TPAIKPLLPLSPS NHPSR  IS  FCRPISDSSP C I +S RQRRQV+ASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDDEDDS KV+PPMPPTEGRFDVVIDND I  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLKQHDIPKPRLKTA+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]
BLAST of Tan0020327 vs. ExPASy TrEMBL
Match: A0A0A0LTF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.9e-126
Identity = 225/254 (88.58%), Postives = 236/254 (92.91%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TP IKP  PLSPS NHPSR  IS  F RPISDSSPS LIS+S R RRQ++ASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDD+DDS KVAPPMPPTEGRFDVVIDNDAI  LDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLKQHDIPKPRLK A+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]
BLAST of Tan0020327 vs. ExPASy TrEMBL
Match: A0A1S3B982 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.7e-124
Identity = 226/254 (88.98%), Postives = 235/254 (92.52%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M+TP IKP LPLSPS NHPSR  IS  F RPIS SSP   IS+S R R Q++ASVAFNPS
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSP---ISTSSRHRPQLSASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDD+DDSPKVAPPMPPTEGRFDVVIDNDAI  LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+MKKVFIVYSWLKQHDIPKPRLK A+MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQHPV+PP
Sbjct: 241 ELFDLIDQHPVAPP 251

[Close]
BLAST of Tan0020327 vs. ExPASy TrEMBL
Match: A0A6J1C097 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007292 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.5e-120
Identity = 218/254 (85.83%), Postives = 226/254 (88.98%), Query Frame = 0 

Query: 1   MATPAIKPLLPLSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNPS 60
           M TPAIKPLLPLSPSIN PSR   S  FCRP              R RRQVAASVAFNPS
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRPTFP-----------RHRRQVAASVAFNPS 60

Query: 61  GNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISPLATEPK 120
           GNF+LSLQDDEDDSPKVAPPMPPT+GRFDVVIDND I RLDLS FQKTTGIISPL+TEPK
Sbjct: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGD 240
           MLVPHQISMRMGIVFNPEALELF+M KVF VYSWLKQHDIPKPRLKT +MARM+GFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVSPP 255
           ELFDLIDQ+PV+PP
Sbjct: 241 ELFDLIDQNPVAPP 243

[Close]
BLAST of Tan0020327 vs. TAIR 10
Match: AT2G47910.1 (chlororespiratory reduction 6 )

HSP 1 Score: 326.2 bits (835), Expect = 2.3e-89
Identity = 167/253 (66.01%), Postives = 199/253 (78.66%), Query Frame = 0 

Query: 1   MATPAIKPLLP-LSPSINHPSRLLISSRFCRPISDSSPSCLISSSFRQRRQVAASVAFNP 60
           MAT A+  LLP L PS  H S   +      P  +++  C+     R+   VA SVAFNP
Sbjct: 1   MATKAV--LLPWLIPSPRHVSLFPVVQ---LPALETAGWCVRK---RRAEDVAVSVAFNP 60

Query: 61  SGNFDLSLQDDEDDSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISP---LA 120
           SGNFD+S  +++ DS KV PPMPPT GR++VVIDND+I RLDLS FQ+  GI SP     
Sbjct: 61  SGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGV 120

Query: 121 TEPKQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELA 180
            EPK++L+RTIGFTINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELA
Sbjct: 121 AEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELA 180

Query: 181 RYAAMLVPHQISMRMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGF 240
           RYAAMLVPHQ+S+RMG+VFNPEALELF+M KVF+VY WLK+H +PKPRLKT+DMARM+GF
Sbjct: 181 RYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGF 240

Query: 241 GIGDELFDLIDQH 250
           GIGDELFDLID +
Sbjct: 241 GIGDELFDLIDHN 245

[Close]
BLAST of Tan0020327 vs. TAIR 10
Match: AT2G47910.2 (chlororespiratory reduction 6 )

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-80
Identity = 138/180 (76.67%), Postives = 159/180 (88.33%), Query Frame = 0 

Query: 73  DSPKVAPPMPPTEGRFDVVIDNDAICRLDLSSFQKTTGIISP---LATEPKQFLERTIGF 132
           DS KV PPMPPT GR++VVIDND+I RLDLS FQ+  GI SP      EPK++L+RTIGF
Sbjct: 18  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGF 77

Query: 133 TINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISM 192
           TINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAAMLVPHQ+S+
Sbjct: 78  TINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSL 137

Query: 193 RMGIVFNPEALELFMMKKVFIVYSWLKQHDIPKPRLKTADMARMIGFGIGDELFDLIDQH 250
           RMG+VFNPEALELF+M KVF+VY WLK+H +PKPRLKT+DMARM+GFGIGDELFDLID +
Sbjct: 138 RMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 197

The following BLAST results are available for this feature:
BLAST of Tan0020327 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O822583.2e-8866.01Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=... [more]
BLAST of Tan0020327 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022987841.11.6e-12991.34protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim... [more]
XP_022921932.12.3e-12890.55protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch... [more]
XP_038876902.16.8e-12890.16protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida][more]
KAG6589804.12.0e-12790.16Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyros... [more]
XP_023515428.11.1e-12589.37protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo... [more]
BLAST of Tan0020327 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JFH17.8e-13091.34protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita max... [more]
A0A6J1E1R81.1e-12890.55protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita mos... [more]
A0A0A0LTF08.9e-12688.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1[more]
A0A1S3B9823.7e-12488.98protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1C0979.5e-12085.83protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3... [more]
BLAST of Tan0020327 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47910.12.3e-8966.01chlororespiratory reduction 6 [more]
AT2G47910.21.1e-8076.67chlororespiratory reduction 6 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014946Protein chlororespiratory reduction 6PFAMPF08847Crr6coord: 92..245
e-value: 2.5E-58
score: 196.0
IPR014946Protein chlororespiratory reduction 6PANTHERPTHR35724PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTICcoord: 4..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0020327.1Tan0020327.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010275 NAD(P)H dehydrogenase complex assembly
cellular_component GO:0009507 chloroplast