Tan0020317 (gene) Snake gourd v1

Overview


Name	Tan0020317
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L32, putative
Location	LG03: 79594280 .. 79596036 (-)
RNA-Seq Expression	Tan0020317
Synteny	Tan0020317

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGAGGGTTAAGCAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTCAAAGTATGTGTATTAACTTTTAGTAGTTTTACTCTGTATAACTAATATTTCTGCTTGCTAGTGATTTTGTATTCAACTATGTGCATATTATGCATGCGAGAGTTGAGCTTCGCTCGGCTAATTATCGATGTCAGCGACGACGCTTTAGTTCACATTGAATCTGTAATTTTATCTCGATATTTAGTAACTCGCGTGTGGATCTGTAGAGTATTTGGTGTTACAGTCCATTCAATTAGTTACGGAATGTCATGAGGGGTTTTGTCGCTCCAGTCTTATTTTCATTACTTGATACAATTCGTGTTTAGCATCTTAAGTTTTTAACTTCAAGTTGTATCAATTATTCATTTTGATGATAGCATATTAATTTGATGTTTCAAAAAAAAATATTCAATTTGATGATAGTTTTGTCCCTCGTTTTTTGTTTACTCATCGTTGCACCTTTTGTCTGCTATCGGTTAATTAAATGTTTTTCAATTAATATTTATGACATAACAACTGTTAAATTATTACAATAAGTACCTGCAACAGTGATGTTATTTACAATGGCTAATATTGATGCAACAAGTTCTTTGCTTTTTTGAATGACGAATTCATTTCCTGCTCTACGAATCAGCATGTTGTTCACTCGTAGCCATCTCCTACATTAGATGTTTTTTCAGTCACCACGAGCTGCTATTGGTCAATCAAAAGAGCATGTTAGGTATCTATAAGTGTCAAAATGAAAAGGAAATTTGTTGTGTTTTCACTCCTTTTTCGGCTTAGTGTCTATTTTGGTATCTATCTCTTCGTTTCCACTTGAACTACATTCATTTCTAAAGTTTTTTTGTTATTATAAAAGTAACTACTGAAGTCCAGTTGCCTTTACTCTTCTGTTTCCTGCATTTTGTTTGAAGGGAAAAGGTTGAAATCTCGTATGAGGTCTGATTACTCTCTCTTATTAATGTTTTAAAAATCCTTGTCTTGTTTCCTTTTGGGCCTTTTATCCCTGTAACCTTACCTTGCTTATACTTCTACTGCTATCATTTTCTATGATTCAACCGTAAGTCGGTTGGTGATGTAACATGTCGTGTTGACCTTGATGGTAAACAATGCCTGATTATCATTGATACTTAGTTTGTGTTTCTGTTGGAGCCTTATCCTATATTCTGGTATCTTAAACATGCTTGATGCATCTGATGTATTTTGTGCAATCTGTGTTATGTAATATTTACTTCGTGATTGGTCAAATGTATATTGACAGACAAACTGGCGGAGACCAAAGGGTATTGATTCTCGTGTCCGTAGAAAGTTCAAAGGATGCACTTTGATGCCAAATATTGGGTATGGTACTGACAAGAAGACCCGTCATTATCTTCCTAATGGATTCAAGAAGTTCGTTGTGCACAACGTCAAAGAGCTTGAATTGTTGATGATGCACAATAGGCAAGCACTGATTTCTTCACATTTCATCTAATATGTCATTACTCCTTAACTTCATGATTGACTATATTTGAAAAGGTAATATTACATGGCTGATTTATTCTTAATTCTGTAATTTCAGGACTTACTGTGCTGAGATTGCACATGATGTGTCCACAAGAAAGAGGAAGGAGATTGTGGAGAGAGCTGCCCAGCTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAATGA

mRNA sequence

ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGAGGGTTAAGCAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTCAAAACAAACTGGCGGAGACCAAAGGGTATTGATTCTCGTGTCCGTAGAAAGTTCAAAGGATGCACTTTGATGCCAAATATTGGGTATGGTACTGACAAGAAGACCCGTCATTATCTTCCTAATGGATTCAAGAAGTTCGTTGTGCACAACGTCAAAGAGCTTGAATTGTTGATGATGCACAATAGGACTTACTGTGCTGAGATTGCACATGATGTGTCCACAAGAAAGAGGAAGGAGATTGTGGAGAGAGCTGCCCAGCTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAATGA

Coding sequence (CDS)

ATGGCGGTGCCGTTGCTGACGAAGAAGATCGTTAAGAAGAGGGTTAAGCAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTCAAAACAAACTGGCGGAGACCAAAGGGTATTGATTCTCGTGTCCGTAGAAAGTTCAAAGGATGCACTTTGATGCCAAATATTGGGTATGGTACTGACAAGAAGACCCGTCATTATCTTCCTAATGGATTCAAGAAGTTCGTTGTGCACAACGTCAAAGAGCTTGAATTGTTGATGATGCACAATAGGACTTACTGTGCTGAGATTGCACATGATGTGTCCACAAGAAAGAGGAAGGAGATTGTGGAGAGAGCTGCCCAGCTCGATGTAGTTGTCACCAACAAGCTTGCTAGGTTGCGCAGCCAGGAGGATGAATGA

Protein sequence

MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

Homology

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BLAST of Tan0020317 vs. ExPASy Swiss-Prot
Match: P49211 (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 1.2e-59
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+VST+KRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

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BLAST of Tan0020317 vs. ExPASy Swiss-Prot
Match: Q9FHG2 (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 8.1e-59
Identity = 111/133 (83.46%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++ST+KRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

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BLAST of Tan0020317 vs. ExPASy Swiss-Prot
Match: E2RKA8 (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-44
Identity = 88/130 (67.69%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 4   PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKR K+F R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS++ RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Tan0020317 vs. ExPASy Swiss-Prot
Match: P62910 (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-44
Identity = 88/130 (67.69%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 4   PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKR K+F R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS++ RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Tan0020317 vs. ExPASy Swiss-Prot
Match: Q76KA3 (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3)

HSP 1 Score: 179.9 bits (455), Expect = 1.9e-44
Identity = 88/130 (67.69%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 4   PLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKR K+F R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS++ RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]

BLAST of Tan0020317 vs. NCBI nr
Match: XP_022925632.1 (60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925633.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925634.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925635.1 60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022978736.1 60S ribosomal protein L32-1-like isoform X2 [Cucurbita maxima] >XP_022978737.1 60S ribosomal protein L32-1-like isoform X2 [Cucurbita maxima] >XP_023543823.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023543824.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >KAF3435907.1 hypothetical protein FNV43_RR22999 [Rhamnella rubrinervis] >KAG6581400.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. NCBI nr
Match: XP_022142034.1 (60S ribosomal protein L32-1-like [Momordica charantia] >XP_022142035.1 60S ribosomal protein L32-1-like [Momordica charantia])

HSP 1 Score: 263.1 bits (671), Expect = 1.3e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. NCBI nr
Match: XP_038883938.1 (60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883939.1 60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883940.1 60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883941.1 60S ribosomal protein L32-1-like [Benincasa hispida])

HSP 1 Score: 262.3 bits (669), Expect = 2.3e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKEL+LLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELDLLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. NCBI nr
Match: XP_008439684.1 (PREDICTED: 60S ribosomal protein L32-1-like [Cucumis melo] >XP_008439685.1 PREDICTED: 60S ribosomal protein L32-1-like [Cucumis melo] >TYK13251.1 60S ribosomal protein L32-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 3.8e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAH+VSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. NCBI nr
Match: XP_004134637.1 (60S ribosomal protein L32-1 [Cucumis sativus] >XP_011658274.1 60S ribosomal protein L32-1 [Cucumis sativus] >KGN49362.1 hypothetical protein Csa_004377 [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 5.0e-66
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVTELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. ExPASy TrEMBL
Match: A0A6J1INV4 (60S ribosomal protein L32-1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478603 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.9e-67
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. ExPASy TrEMBL
Match: A0A6J1EC74 (60S ribosomal protein L32-1-like isoform X14 OS=Cucurbita moschata OX=3662 GN=LOC111432992 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.9e-67
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. ExPASy TrEMBL
Match: A0A6J1CJS6 (60S ribosomal protein L32-1-like OS=Momordica charantia OX=3673 GN=LOC111012261 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.4e-67
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. ExPASy TrEMBL
Match: A0A1S3AYX5 (60S ribosomal protein L32-1-like OS=Cucumis melo OX=3656 GN=LOC103484404 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAH+VSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. ExPASy TrEMBL
Match: A0A2N9EJQ2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2833 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAH+VSTRKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. TAIR 10
Match: AT4G18100.1 (Ribosomal protein L32e )

HSP 1 Score: 230.3 bits (586), Expect = 8.8e-61
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+VST+KRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. TAIR 10
Match: AT5G46430.1 (Ribosomal protein L32e )

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-60
Identity = 111/133 (83.46%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++ST+KRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]

BLAST of Tan0020317 vs. TAIR 10
Match: AT5G46430.2 (Ribosomal protein L32e )

HSP 1 Score: 227.6 bits (579), Expect = 5.7e-60
Identity = 111/133 (83.46%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MAVPLLTKKIVKKRVKQFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLTKK+VKKR  +F RPQSDR+I+VK +WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++ST+KRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

The following BLAST results are available for this feature:

BLAST of Tan0020317 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49211	1.2e-59	85.71	60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2	[more]
Q9FHG2	8.1e-59	83.46	60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1	[more]
E2RKA8	1.9e-44	67.69	60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1	[more]
P62910	1.9e-44	67.69	60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2	[more]
Q76KA3	1.9e-44	67.69	60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3	[more]

BLAST of Tan0020317 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925632.1	1.0e-66	100.00	60S ribosomal protein L32-1-like isoform X14 [Cucurbita moschata] >XP_022925633....	[more]
XP_022142034.1	1.3e-66	99.25	60S ribosomal protein L32-1-like [Momordica charantia] >XP_022142035.1 60S ribos...	[more]
XP_038883938.1	2.3e-66	99.25	60S ribosomal protein L32-1-like [Benincasa hispida] >XP_038883939.1 60S ribosom...	[more]
XP_008439684.1	3.8e-66	99.25	PREDICTED: 60S ribosomal protein L32-1-like [Cucumis melo] >XP_008439685.1 PREDI...	[more]
XP_004134637.1	5.0e-66	99.25	60S ribosomal protein L32-1 [Cucumis sativus] >XP_011658274.1 60S ribosomal prot...	[more]

BLAST of Tan0020317 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INV4	4.9e-67	100.00	60S ribosomal protein L32-1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EC74	4.9e-67	100.00	60S ribosomal protein L32-1-like isoform X14 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CJS6	6.4e-67	99.25	60S ribosomal protein L32-1-like OS=Momordica charantia OX=3673 GN=LOC111012261 ...	[more]
A0A1S3AYX5	1.9e-66	99.25	60S ribosomal protein L32-1-like OS=Cucumis melo OX=3656 GN=LOC103484404 PE=3 SV...	[more]
A0A2N9EJQ2	1.9e-66	99.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2833 PE=3 SV=1	[more]

BLAST of Tan0020317 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18100.1	8.8e-61	85.71	Ribosomal protein L32e	[more]
AT5G46430.1	5.7e-60	83.46	Ribosomal protein L32e	[more]
AT5G46430.2	5.7e-60	83.46	Ribosomal protein L32e	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001515	Ribosomal protein L32e	SMART	SM01393	Ribosomal_L32e_2	coord: 15..122 e-value: 4.0E-72 score: 255.6
IPR001515	Ribosomal protein L32e	PFAM	PF01655	Ribosomal_L32e	coord: 16..122 e-value: 3.0E-49 score: 165.9
IPR001515	Ribosomal protein L32e	PANTHER	PTHR23413	60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N	coord: 1..133
IPR001515	Ribosomal protein L32e	CDD	cd00513	Ribosomal_L32_L32e	coord: 16..122 e-value: 4.76271E-59 score: 175.796
None	No IPR available	PANTHER	PTHR23413:SF18	60S RIBOSOMAL PROTEIN L32-1-LIKE	coord: 1..133
IPR036351	Ribosomal protein L32e superfamily	SUPERFAMILY	52042	Ribosomal protein L32e	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020317.1	Tan0020317.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009718	anthocyanin-containing compound biosynthetic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0047213	anthocyanidin 3-O-glucosyltransferase activity
molecular_function	GO:0080043	quercetin 3-O-glucosyltransferase activity
molecular_function	GO:0080044	quercetin 7-O-glucosyltransferase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0004842	ubiquitin-protein transferase activity