Tan0020282 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAGACTAAAATAAAATCCTCTTTGGCTCTTTTCTCTATGGCTGCTGTGTCAAAAAGTGCAAACAACAGGCCAATTGAGGAAGAAAGTGAACTAAGAAGAGGGCCATGGACTATTGAAGAAGATACATTGTTGATTCATTATATTGCTGGTCATGGAGAAGGTCAATGGAACATATTGGCCAAAAAAGCTGGTATTTAATTTAAATACTTTCTCACTTTTCCCTTTTTATTTAAATTCAAATATGCATTAATCTATCAATTGTCTCATCTCTTCTCCAAACAATTTTTTTTCAGGCCTCAAGAGAACAGGAAAAAGCTGCCGATTGAGATGGTTGAATTATTTAAAACCCGACGTTAAGCGCGGGAACCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTCCATTCCAAGTGGGGCAACAGGTATATTCTTACGCATATTTTCGATGATATTAATTTGATTCACAAACTAACTTGACGCGACATCGTAAAACTTCGAACTTCTAACCTCTCAATGAACTCAAAATCTTAGGTTATGGTTACACTTAGAGAACGTTTACCCTATGGTATATATTTTTTATGGTGAATTTAGGATGCTTTTTAAAATAGTAAAGGGTGTTTTTAGCATAATAGAGAAGTTTTCAAATCATTCCTAATGTTTGGTTAAATAATACAAAATGATGTTAGTAATCTAAGAAACACTAAAAAACACTTCCGATATGTTTAGAGAGTGATTTTGGAATGACATGATATTGGTCATTTTAAAATCACTCCCAAACATACTTTTAAAGTGAGTTCTAAAAGTGTAATTAGCAAAAAGTGATTTTTGTTTACATTTCGACAAACGACAAAAAAAGAATTAAAAAACAAGAAAATCAACATACATATTTATGTGATTCACTAGTAGCATGTTAGCTATGTCCACAAGCAGAAAGAGAAATACTTATATTGAGGAGTAACATAGTACAAATTACATAGAATTATTTGTGCGCATATATATATATATATTTAAAGATGGCAGATAAGAGTTAGAGAGTTTATATATGACACCCTAGTAAATCCTAAATAAATTAAAATAGACACATACTGGATCATTTAGAGTGCCAGATGACATATTCAACCGTTTAAAAATACTTATGTCAAAGTCTATTTTCAAACTCATCATTTTAATAATTAATTATTTGTGTTTAAAAAATCTATAGGTGGTCAAAGATTGCACAACACCTACCAGGAAGAACGGATAACGAGATCAAGAACTACTGGAGGACAAGAGTTCAAAAACAGATACGTCAGCTGAAAGTTCAAGCAAACAGCATGAGATTTTTGGATGCCATTTGCCATTTAAGCGTGCTAGAAGCCATGGACCAAACCTCAAACTACACCATCAATTTTCCTCCTCCATCTCTCCACAACATGGCCTTACCGACCTCGTCGGAAACCGCCCTTCCAACGTCAAACCAAGGCGGCGGGGCTCCTCCTCCGCCTCCAGGTTCAGTCCACCAATGGCCTGAAATCTCAGAATACCCACCAAGTCCTTATGGTGAATTTGTGGAAACTTGGAGCTTTGACATGGTGCAGCAGAAGCAGAAACAGGAGCCAGTTTATGCATTGGGTGCTTGGGAAGTTGCAGAATGTGATGCCCAAATGGCAGCACCTGATTGGCTATTGGAAGATGCCATGGTTGAAAATTTGTGGAATTTGGATCATCACTTCATATAATATAAAGGCTGTGCTCACTCTTCATTGTCATGAGAGAATTAAAAACCCTTTTTGCATTTATTTTACCTTCTAATTTTATATGTAAGCTTTTTTAGATTTTAAAAATTACTACTAGAGGTAAGTTGAGGAAATTTTCTAAAAACAAAGTTTAAAAAGTGTTAGGAGAAAATGAATTTATATCTATCCCAATGCAATCAAGCAATATAAATATTATCCCAATTCCGAATCAAGTAATTCCTATTCCAATTATAATGTATTAAATTTTAGTTGGAGCTAACAGCTCAAAAGTAATAGATAAACAAAGAACCTAAA ATTTAGACTAAAATAAAATCCTCTTTGGCTCTTTTCTCTATGGCTGCTGTGTCAAAAAGTGCAAACAACAGGCCAATTGAGGAAGAAAGTGAACTAAGAAGAGGGCCATGGACTATTGAAGAAGATACATTGTTGATTCATTATATTGCTGGTCATGGAGAAGGTCAATGGAACATATTGGCCAAAAAAGCTGGCCTCAAGAGAACAGGAAAAAGCTGCCGATTGAGATGGTTGAATTATTTAAAACCCGACGTTAAGCGCGGGAACCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTCCATTCCAAGTGGGGCAACAGGTGGTCAAAGATTGCACAACACCTACCAGGAAGAACGGATAACGAGATCAAGAACTACTGGAGGACAAGAGTTCAAAAACAGATACGTCAGCTGAAAGTTCAAGCAAACAGCATGAGATTTTTGGATGCCATTTGCCATTTAAGCGTGCTAGAAGCCATGGACCAAACCTCAAACTACACCATCAATTTTCCTCCTCCATCTCTCCACAACATGGCCTTACCGACCTCGTCGGAAACCGCCCTTCCAACGTCAAACCAAGGCGGCGGGGCTCCTCCTCCGCCTCCAGGTTCAGTCCACCAATGGCCTGAAATCTCAGAATACCCACCAAGTCCTTATGGTGAATTTGTGGAAACTTGGAGCTTTGACATGGTGCAGCAGAAGCAGAAACAGGAGCCAGTTTATGCATTGGGTGCTTGGGAAGTTGCAGAATGTGATGCCCAAATGGCAGCACCTGATTGGCTATTGGAAGATGCCATGGTTGAAAATTTGTGGAATTTGGATCATCACTTCATATAATATAAAGGCTGTGCTCACTCTTCATTGTCATGAGAGAATTAAAAACCCTTTTTGCATTTATTTTACCTTCTAATTTTATATGTAAGCTTTTTTAGATTTTAAAAATTACTACTAGAGGTAAGTTGAGGAAATTTTCTAAAAACAAAGTTTAAAAAGTGTTAGGAGAAAATGAATTTATATCTATCCCAATGCAATCAAGCAATATAAATATTATCCCAATTCCGAATCAAGTAATTCCTATTCCAATTATAATGTATTAAATTTTAGTTGGAGCTAACAGCTCAAAAGTAATAGATAAACAAAGAACCTAAA ATGGCTGCTGTGTCAAAAAGTGCAAACAACAGGCCAATTGAGGAAGAAAGTGAACTAAGAAGAGGGCCATGGACTATTGAAGAAGATACATTGTTGATTCATTATATTGCTGGTCATGGAGAAGGTCAATGGAACATATTGGCCAAAAAAGCTGGCCTCAAGAGAACAGGAAAAAGCTGCCGATTGAGATGGTTGAATTATTTAAAACCCGACGTTAAGCGCGGGAACCTCACTCTTCAAGAACAACTCCTCATCCTCGAACTCCATTCCAAGTGGGGCAACAGGTGGTCAAAGATTGCACAACACCTACCAGGAAGAACGGATAACGAGATCAAGAACTACTGGAGGACAAGAGTTCAAAAACAGATACGTCAGCTGAAAGTTCAAGCAAACAGCATGAGATTTTTGGATGCCATTTGCCATTTAAGCGTGCTAGAAGCCATGGACCAAACCTCAAACTACACCATCAATTTTCCTCCTCCATCTCTCCACAACATGGCCTTACCGACCTCGTCGGAAACCGCCCTTCCAACGTCAAACCAAGGCGGCGGGGCTCCTCCTCCGCCTCCAGGTTCAGTCCACCAATGGCCTGAAATCTCAGAATACCCACCAAGTCCTTATGGTGAATTTGTGGAAACTTGGAGCTTTGACATGGTGCAGCAGAAGCAGAAACAGGAGCCAGTTTATGCATTGGGTGCTTGGGAAGTTGCAGAATGTGATGCCCAAATGGCAGCACCTGATTGGCTATTGGAAGATGCCATGGTTGAAAATTTGTGGAATTTGGATCATCACTTCATATAA MAAVSKSANNRPIEEESELRRGPWTIEEDTLLIHYIAGHGEGQWNILAKKAGLKRTGKSCRLRWLNYLKPDVKRGNLTLQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQIRQLKVQANSMRFLDAICHLSVLEAMDQTSNYTINFPPPSLHNMALPTSSETALPTSNQGGGAPPPPPGSVHQWPEISEYPPSPYGEFVETWSFDMVQQKQKQEPVYALGAWEVAECDAQMAAPDWLLEDAMVENLWNLDHHFI Homology
BLAST of Tan0020282 vs. ExPASy Swiss-Prot
Match: Q9C9G7 (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.6e-58 Identity = 112/168 (66.67%), Postives = 134/168 (79.76%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.3e-55 Identity = 99/132 (75.00%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy Swiss-Prot
Match: Q2QZJ8 (Transcription factor JAMYB OS=Oryza sativa subsp. japonica OX=39947 GN=JAMYB PE=2 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.4e-54 Identity = 96/126 (76.19%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy Swiss-Prot
Match: Q9FGY3 (Transcription factor MYB78 OS=Arabidopsis thaliana OX=3702 GN=MYB78 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.2e-54 Identity = 96/130 (73.85%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy Swiss-Prot
Match: Q9LDE1 (Transcription factor MYB108 OS=Arabidopsis thaliana OX=3702 GN=MYB108 PE=1 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.7e-53 Identity = 95/137 (69.34%), Postives = 117/137 (85.40%), Query Frame = 0
BLAST of Tan0020282 vs. NCBI nr
Match: XP_022998167.1 (transcription factor MYB24-like [Cucurbita maxima]) HSP 1 Score: 442.6 bits (1137), Expect = 2.4e-120 Identity = 212/268 (79.10%), Postives = 235/268 (87.69%), Query Frame = 0
BLAST of Tan0020282 vs. NCBI nr
Match: KAG6607215.1 (Transcription factor MYB62, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.9 bits (1130), Expect = 1.6e-119 Identity = 213/268 (79.48%), Postives = 233/268 (86.94%), Query Frame = 0
BLAST of Tan0020282 vs. NCBI nr
Match: KAG7036900.1 (Transcription factor MYB62 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.9 bits (1130), Expect = 1.6e-119 Identity = 213/268 (79.48%), Postives = 233/268 (86.94%), Query Frame = 0
BLAST of Tan0020282 vs. NCBI nr
Match: XP_022949509.1 (transcription factor MYB62-like [Cucurbita moschata]) HSP 1 Score: 434.9 bits (1117), Expect = 5.1e-118 Identity = 214/269 (79.55%), Postives = 233/269 (86.62%), Query Frame = 0
BLAST of Tan0020282 vs. NCBI nr
Match: XP_023523160.1 (transcription factor MYB62-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 430.6 bits (1106), Expect = 9.6e-117 Identity = 212/269 (78.81%), Postives = 232/269 (86.25%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy TrEMBL
Match: A0A6J1K757 (transcription factor MYB24-like OS=Cucurbita maxima OX=3661 GN=LOC111492895 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120 Identity = 212/268 (79.10%), Postives = 235/268 (87.69%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy TrEMBL
Match: A0A6J1GD12 (transcription factor MYB62-like OS=Cucurbita moschata OX=3662 GN=LOC111452836 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 2.5e-118 Identity = 214/269 (79.55%), Postives = 233/269 (86.62%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy TrEMBL
Match: A0A5A7STF0 (Myb-related protein 305-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00860 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108 Identity = 200/265 (75.47%), Postives = 226/265 (85.28%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy TrEMBL
Match: A0A1S3C718 (myb-related protein 305-like OS=Cucumis melo OX=3656 GN=LOC103497203 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.4e-108 Identity = 200/265 (75.47%), Postives = 226/265 (85.28%), Query Frame = 0
BLAST of Tan0020282 vs. ExPASy TrEMBL
Match: A0A5D3BNG6 (Myb-related protein 305-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00720 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.0e-108 Identity = 199/265 (75.09%), Postives = 226/265 (85.28%), Query Frame = 0
BLAST of Tan0020282 vs. TAIR 10
Match: AT1G68320.1 (myb domain protein 62 ) HSP 1 Score: 227.6 bits (579), Expect = 1.1e-59 Identity = 112/168 (66.67%), Postives = 134/168 (79.76%), Query Frame = 0
BLAST of Tan0020282 vs. TAIR 10
Match: AT5G49620.1 (myb domain protein 78 ) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-55 Identity = 96/130 (73.85%), Postives = 114/130 (87.69%), Query Frame = 0
BLAST of Tan0020282 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 ) HSP 1 Score: 213.0 bits (541), Expect = 2.9e-55 Identity = 94/126 (74.60%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Tan0020282 vs. TAIR 10
Match: AT1G48000.1 (myb domain protein 112 ) HSP 1 Score: 210.3 bits (534), Expect = 1.9e-54 Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 0
BLAST of Tan0020282 vs. TAIR 10
Match: AT3G06490.1 (myb domain protein 108 ) HSP 1 Score: 210.3 bits (534), Expect = 1.9e-54 Identity = 95/137 (69.34%), Postives = 117/137 (85.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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