Tan0020254 (gene) Snake gourd v1

Overview


Name	Tan0020254
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Squamosa promoter binding-like protein
Location	LG02: 1736269 .. 1737743 (-)
RNA-Seq Expression	Tan0020254
Synteny	Tan0020254

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGTTTTGATTTTTGAACATTCTTCATTACCCTCCCCTCCCTTTCTGTACGACCATTACCAACAGCTGCAAGCAAACACACACATACGGATTCAGAAATAAAGAAAAAGTTGTAAGTATTTGTGTGTGTTTTTGTGGTCCATTGCTTTTACCCTCCTTCCTTCTCCCCTTTTTTTTCCTTCTATACTTTCTCCACCACCCCTCAAAGCCCTTTTCGAATCTTCTCTTCTCTACCACTCACTCCCACCAGCTGGTTTTTTTTGTGGGGTTGTGATGGATGTTGGTAAAATTGAAGCAATAACCCATCTGCAGAAACAGAGAGTGATGGAGAAGGAGAGGGTGAAGAAGGAAGATGAAGATGGGGAATATGATGAGGACAAGAAGAGGAAAGGTGTAATCGTTGGTGGTGGCTCCGGGAAGAAGACGGCGTCCGGCGGCGGTGGGATGAGATGTTGTCAAGCTGAGAAGTGTACGGCTGATCTGAGTGAAGCCAAACCGTACCATAGGAGGCACAAGGTCTGTGAGGTTCATTCCAAATCTCAGGTTGTGCTTGTGGGTGGGTTCAGGCAGAGATTTTGTCAGCAATGTAGCAGGTTTGGAACAATAAAAACAACTTTTGTTTTTCACTTTTCATTTACTTTAGACATTTTCTAATGTCTGTTTGTGTGTGATTTGACATGAATTCTTTACACATCAGCTCTCTCTATTGTTGTTTGAGACCTTCATTAAACTCAAATTTTGTAATCTTCAGAATCCCCTAAACATGTTGATCATCAATTCTAAGCTTTTTCTTCTTGTTTCTTCTTGTTTCTTCTCGTTCTTCTTGTTCTGCTTCCTTTGAGTGAACCCAATTCCATCCAAGATTTCACACATTCTACCACTATTGGAAGATGTTCAAATACCTGTAACACCAGCTCTAAGTTCTTGACTTTGGATTTTGGGTGTAGATTCCACGAGCTGTCGGAATTCGACGAAACGAAAAGGAGTTGTCGGAGGCGTCTGGCCGGCCACAACGAGCGTCGGAGGAAGATCTCGGCCGAGTCGAATGCTGAATGCTCCATCCGCAAAGGGACTGGAACACAGATGAAGGATAGTGTGTGTGGGCAGGTTGTTGATGATAAGGGGAGAATTCAAATGACCATTCAAGAAAATGCTGCATTCAAACACTTCCAGATCAGATAAGTTATGAACATAACTATCTACTCAGTATGCTCTCTCTCTTCTGTCAGATTTAGGGGTGATTAAAATCTATAGTCTGTATTATATTATATCCAAGCAGGGTCTATGCAAGAAGATTTAAATGAAAGAATTGCCTTGTTAGAGGATGATTTAGCCATTGAACTCTTGATCATTATCTGTCATAAACAATGTAAAAATCTAGTTCAGATTGATCTGTTTCTGGTGCTGCCTTATGAACGCTATGGTTATTAACTTATTATCTGTCAACTGTTGAACTTACCTGAAATGAAAGGAA

mRNA sequence

TTGGGTTTTGATTTTTGAACATTCTTCATTACCCTCCCCTCCCTTTCTGTACGACCATTACCAACAGCTGCAAGCAAACACACACATACGGATTCAGAAATAAAGAAAAAGTTGTAAGTATTTGTGTGTGTTTTTGTGGTCCATTGCTTTTACCCTCCTTCCTTCTCCCCTTTTTTTTCCTTCTATACTTTCTCCACCACCCCTCAAAGCCCTTTTCGAATCTTCTCTTCTCTACCACTCACTCCCACCAGCTGGTTTTTTTTGTGGGGTTGTGATGGATGTTGGTAAAATTGAAGCAATAACCCATCTGCAGAAACAGAGAGTGATGGAGAAGGAGAGGGTGAAGAAGGAAGATGAAGATGGGGAATATGATGAGGACAAGAAGAGGAAAGGTGTAATCGTTGGTGGTGGCTCCGGGAAGAAGACGGCGTCCGGCGGCGGTGGGATGAGATGTTGTCAAGCTGAGAAGTGTACGGCTGATCTGAGTGAAGCCAAACCGTACCATAGGAGGCACAAGGTCTGTGAGGTTCATTCCAAATCTCAGGTTGTGCTTGTGGGTGGGTTCAGGCAGAGATTTTGTCAGCAATGTAGCAGATTCCACGAGCTGTCGGAATTCGACGAAACGAAAAGGAGTTGTCGGAGGCGTCTGGCCGGCCACAACGAGCGTCGGAGGAAGATCTCGGCCGAGTCGAATGCTGAATGCTCCATCCGCAAAGGGACTGGAACACAGATGAAGGATAGTGTGTGTGGGCAGGTTGTTGATGATAAGGGGAGAATTCAAATGACCATTCAAGAAAATGCTGCATTCAAACACTTCCAGATCAGATAAGTTATGAACATAACTATCTACTCAGTATGCTCTCTCTCTTCTGTCAGATTTAGGGGTGATTAAAATCTATAGTCTGTATTATATTATATCCAAGCAGGGTCTATGCAAGAAGATTTAAATGAAAGAATTGCCTTGTTAGAGGATGATTTAGCCATTGAACTCTTGATCATTATCTGTCATAAACAATGTAAAAATCTAGTTCAGATTGATCTGTTTCTGGTGCTGCCTTATGAACGCTATGGTTATTAACTTATTATCTGTCAACTGTTGAACTTACCTGAAATGAAAGGAA

Coding sequence (CDS)

ATGGATGTTGGTAAAATTGAAGCAATAACCCATCTGCAGAAACAGAGAGTGATGGAGAAGGAGAGGGTGAAGAAGGAAGATGAAGATGGGGAATATGATGAGGACAAGAAGAGGAAAGGTGTAATCGTTGGTGGTGGCTCCGGGAAGAAGACGGCGTCCGGCGGCGGTGGGATGAGATGTTGTCAAGCTGAGAAGTGTACGGCTGATCTGAGTGAAGCCAAACCGTACCATAGGAGGCACAAGGTCTGTGAGGTTCATTCCAAATCTCAGGTTGTGCTTGTGGGTGGGTTCAGGCAGAGATTTTGTCAGCAATGTAGCAGATTCCACGAGCTGTCGGAATTCGACGAAACGAAAAGGAGTTGTCGGAGGCGTCTGGCCGGCCACAACGAGCGTCGGAGGAAGATCTCGGCCGAGTCGAATGCTGAATGCTCCATCCGCAAAGGGACTGGAACACAGATGAAGGATAGTGTGTGTGGGCAGGTTGTTGATGATAAGGGGAGAATTCAAATGACCATTCAAGAAAATGCTGCATTCAAACACTTCCAGATCAGATAA

Protein sequence

MDVGKIEAITHLQKQRVMEKERVKKEDEDGEYDEDKKRKGVIVGGGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRIQMTIQENAAFKHFQIR

Homology

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BLAST of Tan0020254 vs. ExPASy Swiss-Prot
Match: Q9S7A9 (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.5e-34
Identity = 87/171 (50.88%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 19  EKERVKKEDEDGEYDEDKKRKGVIVGGGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHR 78
           +K  + +ED + + DE+++     V G  G  + + GG +R CQ ++CTAD+ EAK YHR
Sbjct: 14  KKSYLVEEDMETDTDEEEEVGRDRVRGSRG--SINRGGSLRLCQVDRCTADMKEAKLYHR 73

Query: 79  RHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKISAE 138
           RHKVCEVH+K+  V + G  QRFCQQCSRFH+L EFDE KRSCRRRLAGHNERRRK S E
Sbjct: 74  RHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 133

Query: 139 SN-AECSIRKGTGTQMKDSVCGQVV---DDKGRIQMTI-QENAAFKHFQIR 185
           S   E S R+G        + GQVV    ++ R++MT+   N++FK  QIR
Sbjct: 134 STYGEGSGRRG--------INGQVVMQNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Tan0020254 vs. ExPASy Swiss-Prot
Match: Q9S758 (Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.2e-33
Identity = 88/160 (55.00%), Postives = 108/160 (67.50%), Query Frame = 0


Query: 26  EDEDGEYDEDKKRKGV-IVGGGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHRRHKVCE 85
           E+EDG  DEDK++K +  V G S  +  S     R CQ ++CT +L+EAK Y+RRH+VCE
Sbjct: 33  EEEDGG-DEDKRKKVMERVRGPSTDRVPS-----RLCQVDRCTVNLTEAKQYYRRHRVCE 92

Query: 86  VHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKISAESNAECS 145
           VH+K+    V G RQRFCQQCSRFHEL EFDE KRSCRRRLAGHNERRRKIS +S  E S
Sbjct: 93  VHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGS 152

Query: 146 IRKGTGTQMKDSVCGQVVDDKGRIQMTIQENAAFKHFQIR 185
            R+G   Q+  +     VD K  + MT   N++FK  QIR
Sbjct: 153 GRRGFSGQLIQTQERNRVDRK--LPMT---NSSFKRPQIR 181

[Close]

BLAST of Tan0020254 vs. ExPASy Swiss-Prot
Match: Q38740 (Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30
Identity = 77/140 (55.00%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 25  KEDEDGEYDEDK---------------KRKGVIVGGGSG-----KKTASGGG--GMRCCQ 84
           +E+E+GE +E++               K+K + +G GSG     K TASGGG     CC 
Sbjct: 27  EEEEEGEDEEEEEQERVVKVNFAESQLKKKKLNLGEGSGGKSGEKHTASGGGVVAQPCCL 86

Query: 85  AEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCR 143
            E C ADL   K Y++RH+VCEVH+K+ VV V G  QRFCQQCSRFH+LSEFD+TKRSCR
Sbjct: 87  VENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRFHDLSEFDQTKRSCR 146

[Close]

BLAST of Tan0020254 vs. ExPASy Swiss-Prot
Match: Q9S7P5 (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=SPL12 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30
Identity = 83/170 (48.82%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 2   DVGKIEAITHLQKQRVMEKERVKKE--------DEDGEYDEDKKRKGVIVGG----GSGK 61
           D G +E    + ++R +E E+ KK         +ED   D+D  R  + +GG    G+G 
Sbjct: 56  DEGNVE----IMERRRIEMEKKKKRRAVTVVAMEEDNLKDDDAHRLTLNLGGNNIEGNGV 115

Query: 62  KTASGGGGMR----CCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQC 121
           K    GGG+     CCQ + C ADLS+ K YHRRHKVCE+HSK+   LVGG  QRFCQQC
Sbjct: 116 KKTKLGGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQC 175

Query: 122 SRFHELSEFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKD 156
           SRFH L EFDE KRSCRRRLAGHN+RRRK + ++        G GT M D
Sbjct: 176 SRFHVLEEFDEGKRSCRRRLAGHNKRRRKANPDT-------IGNGTSMSD 214

[Close]

BLAST of Tan0020254 vs. ExPASy Swiss-Prot
Match: Q6Z461 (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL13 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 66/95 (69.47%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 45  GGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQ 104
           G +G    SGGGG   CQ E+C  DLSEA  Y+RRHKVC+ HSK  VVLV G RQRFCQQ
Sbjct: 94  GRAGGGAPSGGGGGPRCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQ 153

Query: 105 CSRFHELSEFDETKRSCRRRLAGHNERRRKISAES 140
           CSRFHEL+EFD+ KRSCRRRLAGHNERRRK +A++
Sbjct: 154 CSRFHELTEFDDAKRSCRRRLAGHNERRRKSAADT 188

[Close]

BLAST of Tan0020254 vs. NCBI nr
Match: XP_038888920.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 161/188 (85.64%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MDVGKIEAITH---LQKQRVMEKERVKKEDEDGEYDEDKKRKGVIV-GGGSGKKTASGGG 60
           MDVGKIE   H     ++RVME ERVKKEDEDGEYD+DKKRKG+++ GGGSGKK A G G
Sbjct: 1   MDVGKIETTIHHHQKHRERVMENERVKKEDEDGEYDDDKKRKGIVIGGGGSGKKAAGGSG 60

Query: 61  GMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDE 120
           GMRCCQAEKC ADL+EAKPYHRRHKVCEVH+KSQVVLVGGF+QRFCQQCSRFHELSEFDE
Sbjct: 61  GMRCCQAEKCVADLNEAKPYHRRHKVCEVHAKSQVVLVGGFKQRFCQQCSRFHELSEFDE 120

Query: 121 TKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRIQMTIQENA 180
            KRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQ VDDKGRIQMTIQENA
Sbjct: 121 AKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQ-VDDKGRIQMTIQENA 180

Query: 181 AFKHFQIR 185
           ++KHFQIR
Sbjct: 181 SYKHFQIR 187

[Close]

BLAST of Tan0020254 vs. NCBI nr
Match: XP_022989218.1 (squamosa promoter-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 9.0e-82
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MDVGKIEAITHLQKQR-VMEKERVKKE----DEDGEYDEDKKRKGVIV---GGGSGKKTA 60
           MDVGKIE  TH QKQR VMEK RVK++    DEDGEYDEDKKRKGVIV   GGGSGKK A
Sbjct: 1   MDVGKIET-THQQKQRVVMEKGRVKEDMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKKAA 60

Query: 61  SGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELS 120
            GGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVH+KSQVVLVGGFRQRFCQQCSRFHELS
Sbjct: 61  GGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELS 120

Query: 121 EFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRIQMTI 180
           EFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGTG QMKDSVCGQ  DD+GRIQMTI
Sbjct: 121 EFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGAQMKDSVCGQ-ADDQGRIQMTI 180

Query: 181 QENAAFKHFQIR 185
           QENAA+KHFQIR
Sbjct: 181 QENAAYKHFQIR 190

[Close]

BLAST of Tan0020254 vs. NCBI nr
Match: XP_023531078.1 (squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 9.4e-79
Identity = 167/193 (86.53%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 1   MDVGKIEAITHLQKQR-VMEKERVKKE----DEDGEYDEDKKRKGVIV---GGGSGKKTA 60
           MDVGKIE   H QKQR VMEK RVK+     DEDGEYDEDKKRKGVIV    GGSGKK A
Sbjct: 1   MDVGKIET-AHQQKQRVVMEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGSGGSGKKAA 60

Query: 61  SGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELS 120
            GGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVH+KSQVVLVGGFRQRFCQQCSRFHELS
Sbjct: 61  GGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELS 120

Query: 121 EFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGT-GTQMKDSVCGQVVDDKGRIQMT 180
           EFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGT G QMKDSVCGQ  DD+GRIQMT
Sbjct: 121 EFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGAQMKDSVCGQ-ADDQGRIQMT 180

Query: 181 IQENAAFKHFQIR 185
           IQENAA+KHFQIR
Sbjct: 181 IQENAAYKHFQIR 191

[Close]

BLAST of Tan0020254 vs. NCBI nr
Match: XP_022930778.1 (squamosa promoter-binding protein 1-like [Cucurbita moschata] >KAG6589255.1 Squamosa promoter-binding-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 169/194 (87.11%), Postives = 173/194 (89.18%), Query Frame = 0


Query: 1   MDVGKIEAITHLQKQR-VMEKERVKKE----DEDGEYDEDKKRKGVIV---GGGSGKKTA 60
           MDVGKIE  TH QKQR VMEK RVK+     DEDGEYDEDKKRKGVIV   GGGSGKK A
Sbjct: 1   MDVGKIET-THQQKQRVVMEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKKAA 60

Query: 61  SGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELS 120
            GGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVH+KSQVVLVGGFRQRFCQQCSRFHELS
Sbjct: 61  GGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELS 120

Query: 121 EFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGT-GTQMKD-SVCGQVVDDKGRIQM 180
           EFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGT G QMKD SVCGQ  DD+GRIQM
Sbjct: 121 EFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGAQMKDSSVCGQ-ADDQGRIQM 180

Query: 181 TIQENAAFKHFQIR 185
           TIQENAA+KHFQIR
Sbjct: 181 TIQENAAYKHFQIR 192

[Close]

BLAST of Tan0020254 vs. NCBI nr
Match: KAG7022956.1 (Squamosa promoter-binding-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 155/176 (88.07%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 18  MEKERVKKE----DEDGEYDEDKKRKGVIV---GGGSGKKTASGGGGMRCCQAEKCTADL 77
           MEK RVK+     DEDGEYDEDKKRKGVIV   GGGSGKK A GGGGMRCCQAEKCTADL
Sbjct: 1   MEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKKAAGGGGGMRCCQAEKCTADL 60

Query: 78  SEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNE 137
           SEAKPYHRRHKVCEVH+KSQVVLVGGFRQRFCQQCSRFHELSEFDE KRSCRRRLAGHNE
Sbjct: 61  SEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELSEFDEMKRSCRRRLAGHNE 120

Query: 138 RRRKISAESNAECSIRKGT-GTQMKD-SVCGQVVDDKGRIQMTIQENAAFKHFQIR 185
           RRRKISAESNAECSIRKGT G QMKD SVCGQ  DD+GRIQMTIQENAA+KHFQIR
Sbjct: 121 RRRKISAESNAECSIRKGTGGAQMKDSSVCGQ-ADDQGRIQMTIQENAAYKHFQIR 175

[Close]

BLAST of Tan0020254 vs. ExPASy TrEMBL
Match: A0A6J1JPM8 (squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486359 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.4e-82
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MDVGKIEAITHLQKQR-VMEKERVKKE----DEDGEYDEDKKRKGVIV---GGGSGKKTA 60
           MDVGKIE  TH QKQR VMEK RVK++    DEDGEYDEDKKRKGVIV   GGGSGKK A
Sbjct: 1   MDVGKIET-THQQKQRVVMEKGRVKEDMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKKAA 60

Query: 61  SGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELS 120
            GGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVH+KSQVVLVGGFRQRFCQQCSRFHELS
Sbjct: 61  GGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELS 120

Query: 121 EFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRIQMTI 180
           EFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGTG QMKDSVCGQ  DD+GRIQMTI
Sbjct: 121 EFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGAQMKDSVCGQ-ADDQGRIQMTI 180

Query: 181 QENAAFKHFQIR 185
           QENAA+KHFQIR
Sbjct: 181 QENAAYKHFQIR 190

[Close]

BLAST of Tan0020254 vs. ExPASy TrEMBL
Match: A0A6J1EWC3 (squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437155 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.9e-79
Identity = 169/194 (87.11%), Postives = 173/194 (89.18%), Query Frame = 0


Query: 1   MDVGKIEAITHLQKQR-VMEKERVKKE----DEDGEYDEDKKRKGVIV---GGGSGKKTA 60
           MDVGKIE  TH QKQR VMEK RVK+     DEDGEYDEDKKRKGVIV   GGGSGKK A
Sbjct: 1   MDVGKIET-THQQKQRVVMEKGRVKEAMVVVDEDGEYDEDKKRKGVIVSVGGGGSGKKAA 60

Query: 61  SGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELS 120
            GGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVH+KSQVVLVGGFRQRFCQQCSRFHELS
Sbjct: 61  GGGGGMRCCQAEKCTADLSEAKPYHRRHKVCEVHAKSQVVLVGGFRQRFCQQCSRFHELS 120

Query: 121 EFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGT-GTQMKD-SVCGQVVDDKGRIQM 180
           EFDE KRSCRRRLAGHNERRRKISAESNAECSIRKGT G QMKD SVCGQ  DD+GRIQM
Sbjct: 121 EFDEMKRSCRRRLAGHNERRRKISAESNAECSIRKGTGGAQMKDSSVCGQ-ADDQGRIQM 180

Query: 181 TIQENAAFKHFQIR 185
           TIQENAA+KHFQIR
Sbjct: 181 TIQENAAYKHFQIR 192

[Close]

BLAST of Tan0020254 vs. ExPASy TrEMBL
Match: A0A6P3Z3U5 (squamosa promoter-binding protein 1-like OS=Ziziphus jujuba OX=326968 GN=LOC107406208 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.3e-61
Identity = 135/196 (68.88%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 1   MDVGKIEAITHLQKQRVMEKER---VKKEDEDGEY------DEDKKRKGVI--VGGGSGK 60
           MD+GKIE     +++ V+ KE+   VKKE+ D EY      +EDKKRKGV+   GGGSG+
Sbjct: 1   MDLGKIE---RNRQRMVIGKEKVMVVKKEERDEEYEQVGCLEEDKKRKGVVGGGGGGSGR 60

Query: 61  KTASGG-GGMRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRF 120
           K + GG GG+RCCQAEKCTADL++AK YHRRHKVCE+H+K+QVV+VGG RQRFCQQCSRF
Sbjct: 61  KGSGGGVGGLRCCQAEKCTADLTDAKQYHRRHKVCEIHAKAQVVVVGGLRQRFCQQCSRF 120

Query: 121 HELSEFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRI 180
           HELSEFDETKRSCRRRLAGHNERRRK SAES AE S  KG+  Q+KD VCG+ VDD+GRI
Sbjct: 121 HELSEFDETKRSCRRRLAGHNERRRKNSAESPAESSSHKGSSPQLKDIVCGK-VDDRGRI 180

Query: 181 QMTIQENAAFKHFQIR 185
           Q++IQENA +KHFQIR
Sbjct: 181 QISIQENATYKHFQIR 192

[Close]

BLAST of Tan0020254 vs. ExPASy TrEMBL
Match: A0A2I4E643 (squamosa promoter-binding protein 1-like OS=Juglans regia OX=51240 GN=LOC108986645 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.1e-60
Identity = 126/173 (72.83%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 13  QKQRVMEKERVKKEDEDGEYDEDKKRKGVIVGGGS-GKKTASGGGGMRCCQAEKCTADLS 72
           ++Q+V++KE V+ ++E    +E+K++KGV+ GGG  GKK   GG G+RCCQAEKCTADLS
Sbjct: 15  KQQKVVKKEVVESDEELEGVEEEKRKKGVMDGGGGLGKK---GGNGLRCCQAEKCTADLS 74

Query: 73  EAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNER 132
           +AK YHRRHKVCE H+K+QVVLVGG RQRFCQQCSRFHELSEFDETKRSCRRRLAGHNER
Sbjct: 75  DAKQYHRRHKVCEFHAKAQVVLVGGIRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNER 134

Query: 133 RRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRIQMTIQENAAFKHFQIR 185
           RRK SAES+AE S RKGTGTQ+KD VCGQ VDD+GRIQ++I EN+ +KHFQIR
Sbjct: 135 RRKNSAESHAEGSSRKGTGTQLKDIVCGQ-VDDRGRIQISIHENSTYKHFQIR 183

[Close]

BLAST of Tan0020254 vs. ExPASy TrEMBL
Match: A0A5B7BBG5 (SBP-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034224 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.9e-59
Identity = 129/187 (68.98%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 14  KQRVMEKERVKKE-------DED---GEYDEDKKRKGVIVGGGSGKKTASGGGG------ 73
           KQ+ M KE+VKKE       D+D   G  ++DKK++G   GGGSGKK + GGGG      
Sbjct: 9   KQKAM-KEKVKKEAAEAEDLDDDECLGASEDDKKKRGGSSGGGSGKKGSGGGGGGGGAST 68

Query: 74  MRCCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDET 133
           MRCCQAEKCTADLS+AK YHRRH+VCE H+K+QVV+V G RQRFCQQCSRFHE+SEFDE 
Sbjct: 69  MRCCQAEKCTADLSDAKQYHRRHRVCEHHAKAQVVIVAGIRQRFCQQCSRFHEISEFDEA 128

Query: 134 KRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKDSVCGQVVDDKGRIQMTIQENAA 185
           KRSCRRRLAGHNERRRK S++S AE S RKGTGTQ+K+ VCGQ VDD+GRIQ+TIQENA 
Sbjct: 129 KRSCRRRLAGHNERRRKNSSDSQAEGSSRKGTGTQLKEIVCGQ-VDDRGRIQITIQENAT 188

[Close]

BLAST of Tan0020254 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 144.8 bits (364), Expect = 6.8e-35
Identity = 87/171 (50.88%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 19  EKERVKKEDEDGEYDEDKKRKGVIVGGGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHR 78
           +K  + +ED + + DE+++     V G  G  + + GG +R CQ ++CTAD+ EAK YHR
Sbjct: 14  KKSYLVEEDMETDTDEEEEVGRDRVRGSRG--SINRGGSLRLCQVDRCTADMKEAKLYHR 73

Query: 79  RHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKISAE 138
           RHKVCEVH+K+  V + G  QRFCQQCSRFH+L EFDE KRSCRRRLAGHNERRRK S E
Sbjct: 74  RHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 133

Query: 139 SN-AECSIRKGTGTQMKDSVCGQVV---DDKGRIQMTI-QENAAFKHFQIR 185
           S   E S R+G        + GQVV    ++ R++MT+   N++FK  QIR
Sbjct: 134 STYGEGSGRRG--------INGQVVMQNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Tan0020254 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 144.8 bits (364), Expect = 6.8e-35
Identity = 87/171 (50.88%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 19  EKERVKKEDEDGEYDEDKKRKGVIVGGGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHR 78
           +K  + +ED + + DE+++     V G  G  + + GG +R CQ ++CTAD+ EAK YHR
Sbjct: 14  KKSYLVEEDMETDTDEEEEVGRDRVRGSRG--SINRGGSLRLCQVDRCTADMKEAKLYHR 73

Query: 79  RHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKISAE 138
           RHKVCEVH+K+  V + G  QRFCQQCSRFH+L EFDE KRSCRRRLAGHNERRRK S E
Sbjct: 74  RHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGE 133

Query: 139 SN-AECSIRKGTGTQMKDSVCGQVV---DDKGRIQMTI-QENAAFKHFQIR 185
           S   E S R+G        + GQVV    ++ R++MT+   N++FK  QIR
Sbjct: 134 STYGEGSGRRG--------INGQVVMQNQERSRVEMTLPMPNSSFKRPQIR 174

[Close]

BLAST of Tan0020254 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 142.1 bits (357), Expect = 4.4e-34
Identity = 88/160 (55.00%), Postives = 108/160 (67.50%), Query Frame = 0


Query: 26  EDEDGEYDEDKKRKGV-IVGGGSGKKTASGGGGMRCCQAEKCTADLSEAKPYHRRHKVCE 85
           E+EDG  DEDK++K +  V G S  +  S     R CQ ++CT +L+EAK Y+RRH+VCE
Sbjct: 33  EEEDGG-DEDKRKKVMERVRGPSTDRVPS-----RLCQVDRCTVNLTEAKQYYRRHRVCE 92

Query: 86  VHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKISAESNAECS 145
           VH+K+    V G RQRFCQQCSRFHEL EFDE KRSCRRRLAGHNERRRKIS +S  E S
Sbjct: 93  VHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGS 152

Query: 146 IRKGTGTQMKDSVCGQVVDDKGRIQMTIQENAAFKHFQIR 185
            R+G   Q+  +     VD K  + MT   N++FK  QIR
Sbjct: 153 GRRGFSGQLIQTQERNRVDRK--LPMT---NSSFKRPQIR 181

[Close]

BLAST of Tan0020254 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 83/170 (48.82%), Postives = 103/170 (60.59%), Query Frame = 0


Query: 2   DVGKIEAITHLQKQRVMEKERVKKE--------DEDGEYDEDKKRKGVIVGG----GSGK 61
           D G +E    + ++R +E E+ KK         +ED   D+D  R  + +GG    G+G 
Sbjct: 56  DEGNVE----IMERRRIEMEKKKKRRAVTVVAMEEDNLKDDDAHRLTLNLGGNNIEGNGV 115

Query: 62  KTASGGGGMR----CCQAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQC 121
           K    GGG+     CCQ + C ADLS+ K YHRRHKVCE+HSK+   LVGG  QRFCQQC
Sbjct: 116 KKTKLGGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQC 175

Query: 122 SRFHELSEFDETKRSCRRRLAGHNERRRKISAESNAECSIRKGTGTQMKD 156
           SRFH L EFDE KRSCRRRLAGHN+RRRK + ++        G GT M D
Sbjct: 176 SRFHVLEEFDEGKRSCRRRLAGHNKRRRKANPDT-------IGNGTSMSD 214

[Close]

BLAST of Tan0020254 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 125.6 bits (314), Expect = 4.2e-29
Identity = 73/137 (53.28%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 5   KIEAITHLQKQRVMEKERVKKEDEDGEYDE---DKKRKGVIVGGGSGKKTASGGGGMRCC 64
           K E    L++    E+E  + EDED   +E   +KK+K        GK T+S G     C
Sbjct: 7   KAEGKRSLRELSEEEEEEEETEDEDTFEEEEALEKKQK--------GKATSSSG----VC 66

Query: 65  QAEKCTADLSEAKPYHRRHKVCEVHSKSQVVLVGGFRQRFCQQCSRFHELSEFDETKRSC 124
           Q E CTAD+S+AK YH+RHKVC+ H+K+  V + G  QRFCQQCSRFH LSEFDE KRSC
Sbjct: 67  QVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSC 126

Query: 125 RRRLAGHNERRRKISAE 139
           RRRLAGHNERRRK + +
Sbjct: 127 RRRLAGHNERRRKSTTD 131

The following BLAST results are available for this feature:

BLAST of Tan0020254 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7A9	9.5e-34	50.88	Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPL4...	[more]
Q9S758	6.2e-33	55.00	Squamosa promoter-binding-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SPL5...	[more]
Q38740	1.7e-30	55.00	Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV...	[more]
Q9S7P5	1.7e-30	48.82	Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=SPL...	[more]
Q6Z461	2.2e-30	69.47	Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Tan0020254 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888920.1	1.8e-82	85.64	squamosa promoter-binding protein 1-like [Benincasa hispida]	[more]
XP_022989218.1	9.0e-82	88.02	squamosa promoter-binding protein 1-like [Cucurbita maxima]	[more]
XP_023531078.1	9.4e-79	86.53	squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930778.1	1.2e-78	87.11	squamosa promoter-binding protein 1-like [Cucurbita moschata] >KAG6589255.1 Squa...	[more]
KAG7022956.1	2.0e-73	88.07	Squamosa promoter-binding-like protein 4 [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Tan0020254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JPM8	4.4e-82	88.02	squamosa promoter-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1EWC3	5.9e-79	87.11	squamosa promoter-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6P3Z3U5	4.3e-61	68.88	squamosa promoter-binding protein 1-like OS=Ziziphus jujuba OX=326968 GN=LOC1074...	[more]
A0A2I4E643	6.1e-60	72.83	squamosa promoter-binding protein 1-like OS=Juglans regia OX=51240 GN=LOC1089866...	[more]
A0A5B7BBG5	8.9e-59	68.98	SBP-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034224...	[more]

BLAST of Tan0020254 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53160.2	6.8e-35	50.88	squamosa promoter binding protein-like 4	[more]
AT1G53160.1	6.8e-35	50.88	squamosa promoter binding protein-like 4	[more]
AT3G15270.1	4.4e-34	55.00	squamosa promoter binding protein-like 5	[more]
AT3G60030.1	1.2e-31	48.82	squamosa promoter-binding protein-like 12	[more]
AT2G33810.1	4.2e-29	53.28	squamosa promoter binding protein-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 61..134 e-value: 1.1E-31 score: 108.9
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 58..135 score: 31.966171
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 52..122 e-value: 6.0E-32 score: 111.6
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 59..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..42
None	No IPR available	PANTHER	PTHR31251:SF149	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN	coord: 31..184
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 31..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020254.1	Tan0020254.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding