Tan0020210 (gene) Snake gourd v1

Overview


Name	Tan0020210
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	La-related protein 6 isoform 1
Location	LG08: 10829178 .. 10831885 (+)
RNA-Seq Expression	Tan0020210
Synteny	Tan0020210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTAATCGTCATTTTGTATAGCTATAATCGTTGGTACAAAAATCTTGAAACTTCCAATGAGGAATTGAAATCATTCCACGTGGAAACCTCACAGTCATGAAAATTACCAAAAACAGAAAAAAAAATTATCTACTTCTTCTTCTTCCTCATTCTCAAATCCAAAAAACCCCGAAAAAACACAAACAAAACCAAAAGAATCTCAAACCCTCCTTCTCCGTTCCTCCATTGAAGCACGCTTCAATTTTTCCCTCGCCATGTCATTAGCCTCATCGCAACTCAGTTTTCTCGCCACCGCCCTCACCCGCAGCCCCCGCCGGAGCAACAACCTTCTCCATTCTCCCAATCCCATCCTTTCCTCTAAACTCCCTCCCGCCGCCGATGATCCCAAGTAAGTTCCATTCGGCGATTTCGTCGCCATTTTCGCCTATTTCGTTTTCATTTTGAGTCGTTTAGCTTTCTGATTGATTGAATTGATTTTGGTTTTTGACTTGTAGTGGATTAAAGAGGGGAAATGAGAATCGGCTCGCGACGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGACATTGGGATCGGTTCATGATGCCTCGGCTGCCAAGACCGGCGGCCGTGTCGGCGGCCAGGCCTTCCGGTCGGCGGCTCCTCGTCCCTCATCACCGAGAATCAACAACAATTCGAGGTAAGAACGATTGATAAGAATTAGGTTTATGATTGGCTTGAACTTTGGTGCTCTGTTGAGGACATTTTATGAACTGAAATTTATTAATTATTATAGTAGTTTTGTTTTTTTTAATTCATATTTTAGTTATGTGTCTGCTTCATTTATTTAATACTTGTGGTTTTGAAAGTCTTGATTTAGTCTAAATAGAAGGAAAGAGGTGGACAGTTAATGGACAATTTGTGGTATTTAATTATACCAAGCTGAAAGTGTTAAAATTACCAGAACTAAATTGAAACTATACCTATATAGAGACTAAATTAAAACTATAAATTAATCCTAATGAACCCTATCAAAACTTTTTAAACTAAAGGAACTCAATTGAAATTTAGTTCAAACCATAAGGACCAATAATTTGATCATTTAACCTAGCTTTTTATACATAGTTCAAAGACGAAAAATGAAAAGTTCGAAAGCTGAGAGACTGAATAAAATATCTGAAAATTTAAGGTAGGAAAATTTGCAAAAAGCACTCCTAAACCATAGAGGTTGTTACAATCATGCTCTCGAATTTTCAATTTGATCCATTAACATTTTAAACTCATGAATTGTTACAAACTCTTAAAAACTGCAAATTGCACAAACTATCGAGATGACAACTTAACTTCGATCTAGAAACCAACTTTTTTTATTGTTTAATTAATATTATTGATTTCAAATTTCTTAGAGTTAAAAAAAGGGTTAAATTGTAATAATTCTATAATTTAAGGGTTAGATAGTAACAATCACTATAATTCAACGATTTTTTTAGTTCAACAACATTTGGGGGTAGGGGATTCGAACACTTGACCTTTTGTTCGAGGGTACATGTCAATTACCACTAACCTATTCTCACTTTGATCACTATAATTCAACTATAGTTTGTGCATTTTTGCAATGTTTAAGAGTTTAATTCCAAATTTTTTTAAGTTTAGAGGGTGATGAATCAAATTGAAAGTTTAAGAGTATGATTGTAACAACCCTTTTAGTTCAAGGGTGGTTCTCGCAATTTTTCTTAGAATTTGTCTAATTTTTTTCACAATGGGAGCATTAGGGACTTACTTCTTATGTTATGCTTATAGCCTTTTTTGCTAGTGCTAACTTTCGAGAGGCTTCGACTACTCGAAGACCAACTCCATGAACTTAGAGCTTGAACCTTAGGGTTCGAAAGATATCTCTAAGCCCCATTTGATAATCATTTCATTTTTAGTTTTTAGTTTTTGAAAATTAAACCTATAAATACTATTTGTACATATGGTTATCCTTGTTTTGTTATCTACTTTTTACTATGTGTTTCAAAAACCAAGCTAAGTTTTGAAAAAAAAAATCAAAAACTTGTTTTAACTCAAATGATATCATAAGAAAAATGACAACCATCATAGAAAAGTTGACAACAACCATGATAGAAAAACAGTCAGAAAACAAATACAATTTTCAAAAACTAAAAACCAAAAATCAAATAGTTATCAAACAAGGCCTAAACATCTCAAGTTTTTACTATCAGGGTCACCATCAGGTGAATTAAACTTATGTTCAAAATACAAAATGATGGTTTCAAATCTATGAATGTGTTTGAATTTGCAGGACAAATATCTACATAAATCCAAGAGTAGCACCTCCTTTAGTAGGTGGCTATGGCTATGGTTATGGAGTGCCATACTATGGAGGATGGGGATGGTCACCATTTTCATTCTTTGCACCAGCCCCAAGTACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTGTTCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTTAGGAGATTCTTTGGAAGAAGGGAAGAAGATGATGATGATTATTGAAGTCCTTGGATGGAATGTTAGATCATTTCATAACTTTATATTCACACTTTTGAACTTAGCTTTTTGGTGGGAGACTGTTTTTCTTGGTACAAATTGTCACATAATGTATTTGTATAAAGGAGAGACTCTTTGTATTCACAAAGTTAATGTATAAAATGTATAGTTATTTATTT

mRNA sequence

TATTTTAATCGTCATTTTGTATAGCTATAATCGTTGGTACAAAAATCTTGAAACTTCCAATGAGGAATTGAAATCATTCCACGTGGAAACCTCACAGTCATGAAAATTACCAAAAACAGAAAAAAAAATTATCTACTTCTTCTTCTTCCTCATTCTCAAATCCAAAAAACCCCGAAAAAACACAAACAAAACCAAAAGAATCTCAAACCCTCCTTCTCCGTTCCTCCATTGAAGCACGCTTCAATTTTTCCCTCGCCATGTCATTAGCCTCATCGCAACTCAGTTTTCTCGCCACCGCCCTCACCCGCAGCCCCCGCCGGAGCAACAACCTTCTCCATTCTCCCAATCCCATCCTTTCCTCTAAACTCCCTCCCGCCGCCGATGATCCCAATGGATTAAAGAGGGGAAATGAGAATCGGCTCGCGACGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGACATTGGGATCGGTTCATGATGCCTCGGCTGCCAAGACCGGCGGCCGTGTCGGCGGCCAGGCCTTCCGGTCGGCGGCTCCTCGTCCCTCATCACCGAGAATCAACAACAATTCGAGGACAAATATCTACATAAATCCAAGAGTAGCACCTCCTTTAGTAGGTGGCTATGGCTATGGTTATGGAGTGCCATACTATGGAGGATGGGGATGGTCACCATTTTCATTCTTTGCACCAGCCCCAAGTACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTGTTCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTTAGGAGATTCTTTGGAAGAAGGGAAGAAGATGATGATGATTATTGAAGTCCTTGGATGGAATGTTAGATCATTTCATAACTTTATATTCACACTTTTGAACTTAGCTTTTTGGTGGGAGACTGTTTTTCTTGGTACAAATTGTCACATAATGTATTTGTATAAAGGAGAGACTCTTTGTATTCACAAAGTTAATGTATAAAATGTATAGTTATTTATTT

Coding sequence (CDS)

ATGTCATTAGCCTCATCGCAACTCAGTTTTCTCGCCACCGCCCTCACCCGCAGCCCCCGCCGGAGCAACAACCTTCTCCATTCTCCCAATCCCATCCTTTCCTCTAAACTCCCTCCCGCCGCCGATGATCCCAATGGATTAAAGAGGGGAAATGAGAATCGGCTCGCGACGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGACATTGGGATCGGTTCATGATGCCTCGGCTGCCAAGACCGGCGGCCGTGTCGGCGGCCAGGCCTTCCGGTCGGCGGCTCCTCGTCCCTCATCACCGAGAATCAACAACAATTCGAGGACAAATATCTACATAAATCCAAGAGTAGCACCTCCTTTAGTAGGTGGCTATGGCTATGGTTATGGAGTGCCATACTATGGAGGATGGGGATGGTCACCATTTTCATTCTTTGCACCAGCCCCAAGTACTGTTGCTGTTGGCATTGGAGGAGGTTTTGATGTTCTTGTTCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTTAGGAGATTCTTTGGAAGAAGGGAAGAAGATGATGATGATTATTGA

Protein sequence

MSLASSQLSFLATALTRSPRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRFFGRREEDDDDY

Homology

[Close]

BLAST of Tan0020210 vs. NCBI nr
Match: XP_022969609.1 (uncharacterized protein LOC111468585 [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81
Identity = 169/194 (87.11%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP AD+PNGL+RGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADNPNGLERGNENRLA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFV 180
           APPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFV
Sbjct: 121 APPLVG--GYGYGVPYYGGGWGWSPFSFFAPTPS-VAVGIGGGFDVLVLFIFLGTVAAFV 180

Query: 181 RRFFGRREEDDDDY 190
           RRF G REEDDDDY
Sbjct: 181 RRFLGGREEDDDDY 191

[Close]

BLAST of Tan0020210 vs. NCBI nr
Match: XP_038889537.1 (uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 165/193 (85.49%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MSLASSQLSFLATALT-----RSPRRSNNLLHSPNPILSSKLPPAADDPNG-LKRGNENR 60
           MSLASSQLSFL+TA +     R+PRR+NNLLHS N  +S KLPPAADDPNG L RG+ENR
Sbjct: 1   MSLASSQLSFLSTAFSFSFSVRTPRRTNNLLHSSNAGVSCKLPPAADDPNGLLNRGSENR 60

Query: 61  LATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINP 120
           LA LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINP
Sbjct: 61  LAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINP 120

Query: 121 RVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAF 180
           RVAPPLVGGYG+GYGVPYYGGWGWSPFSFFAP+P+ VAVGIGGGFD+L LFI LGTVAAF
Sbjct: 121 RVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPSPA-VAVGIGGGFDLLFLFILLGTVAAF 180

Query: 181 VRRFFGRREEDDD 188
           VRRFFGRRE+DDD
Sbjct: 181 VRRFFGRREDDDD 192

[Close]

BLAST of Tan0020210 vs. NCBI nr
Match: XP_022938204.1 (uncharacterized protein LOC111444353 [Cucurbita moschata] >KAG6586091.1 hypothetical protein SDJN03_18824, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308.5 bits (789), Expect = 3.9e-80
Identity = 168/194 (86.60%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 1   MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADDPNGLERGNENRLA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFV 180
           APPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFV
Sbjct: 121 APPLVG--GYGYGVPYYGGGWGWSPFSFFAPTPS-VAVGIGGGFDVLVLFIFLGTVAAFV 180

Query: 181 RRFFGRREEDDDDY 190
           RRF G R EDDDDY
Sbjct: 181 RRFLGGRGEDDDDY 191

[Close]

BLAST of Tan0020210 vs. NCBI nr
Match: KAG7020916.1 (hypothetical protein SDJN02_17604 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.1 bits (788), Expect = 5.1e-80
Identity = 168/194 (86.60%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 1   MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFV 180
           APPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFV
Sbjct: 121 APPLVG--GYGYGVPYYGGGWGWSPFSFFAPTPS-VAVGIGGGFDVLVLFIFLGTVAAFV 180

Query: 181 RRFFGRREEDDDDY 190
           RRF G R EDDDDY
Sbjct: 181 RRFLGGRGEDDDDY 191

[Close]

BLAST of Tan0020210 vs. NCBI nr
Match: XP_023536753.1 (uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 167/193 (86.53%), Postives = 175/193 (90.67%), Query Frame = 0


Query: 1   MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADDPNGLERGNENRLA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFV 180
           APPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFV
Sbjct: 121 APPLVG--GYGYGVPYYGGGWGWSPFSFFAPTPS-VAVGIGGGFDVLVLFIFLGTVAAFV 180

Query: 181 RRFFGRREEDDDD 189
           RRF G R EDDDD
Sbjct: 181 RRFLGGRGEDDDD 190

[Close]

BLAST of Tan0020210 vs. ExPASy TrEMBL
Match: A0A6J1I348 (uncharacterized protein LOC111468585 OS=Cucurbita maxima OX=3661 GN=LOC111468585 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.8e-81
Identity = 169/194 (87.11%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP AD+PNGL+RGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADNPNGLERGNENRLA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFV 180
           APPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFV
Sbjct: 121 APPLVG--GYGYGVPYYGGGWGWSPFSFFAPTPS-VAVGIGGGFDVLVLFIFLGTVAAFV 180

Query: 181 RRFFGRREEDDDDY 190
           RRF G REEDDDDY
Sbjct: 181 RRFLGGREEDDDDY 191

[Close]

BLAST of Tan0020210 vs. ExPASy TrEMBL
Match: A0A6J1FDE3 (uncharacterized protein LOC111444353 OS=Cucurbita moschata OX=3662 GN=LOC111444353 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.9e-80
Identity = 168/194 (86.60%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 1   MSLASSQLSFLATALTRS----PRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSLASSQLSFL+T L+ S    PRRSNN+LHS +PI++SKLPP ADDPNGL+RGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADDPNGLERGNENRLA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYY-GGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFV 180
           APPLVG  GYGYGVPYY GGWGWSPFSFFAP PS VAVGIGGGFDVLVLFIFLGTVAAFV
Sbjct: 121 APPLVG--GYGYGVPYYGGGWGWSPFSFFAPTPS-VAVGIGGGFDVLVLFIFLGTVAAFV 180

Query: 181 RRFFGRREEDDDDY 190
           RRF G R EDDDDY
Sbjct: 181 RRFLGGRGEDDDDY 191

[Close]

BLAST of Tan0020210 vs. ExPASy TrEMBL
Match: A0A6J1DIH1 (uncharacterized protein LOC111020818 OS=Momordica charantia OX=3673 GN=LOC111020818 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75
Identity = 160/200 (80.00%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 1   MSLASSQLSFL-------ATALTRSPRRSNNLLHSPNPILSSKLPPAADDPNGLK----R 60
           M+LASSQ SFL       A A  R PRR   LLHS N  +SSKLPP ADDP+G       
Sbjct: 1   MALASSQQSFLTNVLSAAAAAAARCPRRMRKLLHSSNAAVSSKLPP-ADDPDGFSFKSGS 60

Query: 61  GNENRLATLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTN 120
           GNENRLA LAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTN
Sbjct: 61  GNENRLAKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTN 120

Query: 121 IYINPRVAPPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLG 180
           IYINP VAPPLVGGYG+GYGVPYYGGWGWSPFSFFAP PS VAVGIGGGFD+L LFIFLG
Sbjct: 121 IYINPPVAPPLVGGYGFGYGVPYYGGWGWSPFSFFAPGPS-VAVGIGGGFDLLFLFIFLG 180

Query: 181 TVAAFVRRFFGRREEDDDDY 190
           +VAA VRRFFG RE+DDDDY
Sbjct: 181 SVAAVVRRFFGTREDDDDDY 198

[Close]

BLAST of Tan0020210 vs. ExPASy TrEMBL
Match: A0A5A7U097 (La-related protein 6 isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00020 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.5e-73
Identity = 152/193 (78.76%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MSLASSQLSFLATA--LTRSPRRSNN--LLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSL SSQLSFL+TA   + SP R++N  LL+S + ++S KLPPA+DDP    +GNENR+A
Sbjct: 1   MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVR 180
           APPLVGGYG+GYGVPYYGGWGWSPFSFFAP+P TVAVGIGGG DVL  FI LG+VAAFVR
Sbjct: 121 APPLVGGYGFGYGVPYYGGWGWSPFSFFAPSP-TVAVGIGGGLDVLFFFILLGSVAAFVR 180

Query: 181 RFFGRREEDDDDY 190
           +  GRRE DDDDY
Sbjct: 181 KILGRREADDDDY 188

[Close]

BLAST of Tan0020210 vs. ExPASy TrEMBL
Match: A0A1S3BRQ8 (uncharacterized protein LOC103492785 OS=Cucumis melo OX=3656 GN=LOC103492785 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.5e-73
Identity = 152/193 (78.76%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 1   MSLASSQLSFLATA--LTRSPRRSNN--LLHSPNPILSSKLPPAADDPNGLKRGNENRLA 60
           MSL SSQLSFL+TA   + SP R++N  LL+S + ++S KLPPA+DDP    +GNENR+A
Sbjct: 1   MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVA 60

Query: 61  TLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120
            LAIVTL AG+LTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVR 180
           APPLVGGYG+GYGVPYYGGWGWSPFSFFAP+P TVAVGIGGG DVL  FI LG+VAAFVR
Sbjct: 121 APPLVGGYGFGYGVPYYGGWGWSPFSFFAPSP-TVAVGIGGGLDVLFFFILLGSVAAFVR 180

Query: 181 RFFGRREEDDDDY 190
           +  GRRE DDDDY
Sbjct: 181 KILGRREADDDDY 188

[Close]

BLAST of Tan0020210 vs. TAIR 10
Match: AT5G57345.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49
Identity = 114/193 (59.07%), Postives = 136/193 (70.47%), Query Frame = 0


Query: 2   SLASSQLSFLATALT---RSPRRSNNLLHSPNPILSSKLPPAADDPNGLKRGNENRLATL 61
           ++ASS+ SFL+   +       +SN  L  PN I         DD     R NEN+LA L
Sbjct: 5   AIASSRQSFLSNNFSFQHSFKPKSNVNLTRPNSICCKS--SHHDDETDSSRKNENQLAKL 64

Query: 62  AIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRVAP 121
           AI TLA GVL LGSV DA AAK+GGR+GGQAFRS+APRP  PRINN SRTNIY+NP+VAP
Sbjct: 65  AIATLAVGVLALGSVGDAFAAKSGGRIGGQAFRSSAPRP-PPRINNRSRTNIYVNPQVAP 124

Query: 122 PLVGGYGYGYGVPYYGGWGWSPFSFFAPAPSTVAVGIGGGFDVLVLFIFLGTVAAFVRRF 181
           PL+GGYGYG     YGG+GWSPFSFFAP P+ VAVG+GGGFD+L+LF+F G  +A  R F
Sbjct: 125 PLIGGYGYG-----YGGYGWSPFSFFAPGPA-VAVGVGGGFDLLLLFMFFGAASAVARNF 184

Query: 182 FGRR--EEDDDDY 190
           F  R  E+D+DDY
Sbjct: 185 FRSRNDEDDEDDY 188

The following BLAST results are available for this feature:

BLAST of Tan0020210 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969609.1	7.9e-81	87.11	uncharacterized protein LOC111468585 [Cucurbita maxima]	[more]
XP_038889537.1	1.3e-80	85.49	uncharacterized protein LOC120079434 isoform X1 [Benincasa hispida]	[more]
XP_022938204.1	3.9e-80	86.60	uncharacterized protein LOC111444353 [Cucurbita moschata] >KAG6586091.1 hypothet...	[more]
KAG7020916.1	5.1e-80	86.60	hypothetical protein SDJN02_17604 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023536753.1	2.5e-79	86.53	uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0020210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I348	3.8e-81	87.11	uncharacterized protein LOC111468585 OS=Cucurbita maxima OX=3661 GN=LOC111468585...	[more]
A0A6J1FDE3	1.9e-80	86.60	uncharacterized protein LOC111444353 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A6J1DIH1	2.4e-75	80.00	uncharacterized protein LOC111020818 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7U097	8.5e-73	78.76	La-related protein 6 isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BRQ8	8.5e-73	78.76	uncharacterized protein LOC103492785 OS=Cucumis melo OX=3656 GN=LOC103492785 PE=...	[more]

BLAST of Tan0020210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57345.1	2.2e-49	59.07	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..49
None	No IPR available	PANTHER	PTHR37768	OS06G0694800 PROTEIN	coord: 1..189
None	No IPR available	PANTHER	PTHR37768:SF2	OS06G0694800 PROTEIN	coord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020210.1	Tan0020210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071470	cellular response to osmotic stress
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane