Tan0020204 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGTACCGGGGACAGCCTTGTTAATCGTTAGGGCTTCCATCAAATTCTTTTACTTCTTCCGCCGCTCAATCTTCGTCTTTCTCTCTTACTTCTTGACTCTTCCAACTTTGCCGTCGCCCGCCGCATCCCTCTCTCCCGGCGTCGCCTCCCGCGACTCGGACCTCTGCAGTCGCCTTCCATTGTCGGCGCCTCGTGAGAAGCTATTTTTGTCGCTCTCGTCAGCTCGTAAGTAATTTTTCTTTTAATTTGAAAAACAATCTTCATTTTCATTGAACTTATGAACCTGTGATTTTGTTCAGAAATGAAAATCCTTGGGTTGATAGTTCTGGAAACCCCCACGTATTGATGCTTGGTATTCTGGAAACCGACGAATCCGGACCGGACCGAACCGAACGGTTCGTCTGCTTCGATCGAAACTGGTCTGACGAGATGATTGTTTCATAAGAGTCAGACGCACATATTTTTATTGGATGATTTTTTTTTATTTGTTTTATAAATCAGTTTACTTTTGTGGTTTCCTTGGATCAAGTTACTGATTGGAACTCGGCTGTTTCTGCTGCTCTTGTGATCGTTTTATTTCAAAAATGTTTTATTACCTATTCCTAAGAAACACATGCAGTTTATGATTTAAGTTTGATGCAAAATTTAGCAGTTTGATTTATATTTCTCCGAGGGGTGTGACCCATATGTTAATTTGATATGATTTGATCTTAATCTTAATTTTATTCGTATCATCTTAAAAGTTTCAATTTTCTGTTTATAGTTTGATTAAATGTCACAAATGATTTCTGAATTCGTTGTCATAGAAATAAAGAACATGTCACCCATCCATAATGGTCATGATAATACTGCTTTGTGAGATATTGAATAAATCATAAAGGACCAAATTTAAATCTTTTAAAAACCTTGACTAAATTGAAGCTAAACCCAAACCCATAATGACCAAATTGAAACCTTTAGAATCACGAAGACACTTATCGAAAAGAAAGAATCATAGAGACAAAACTCACACAAGGTCTAAAAACTCAGAGTTCATAATTTAACCTTCTGTTGATTATGCGACAGGTTTGGCCTTGTCAAGCATGGATCCTTGCCATACTAGGGAGGAAGATGCTAACATTGGAAAGAAACATGAGTCTGATCCATCAAATCCAATTAGAAAGAACAAACGTAAGCCTGAAGTTGATGGAGGGAATTCTGATACTGATAGTGGCAGAGCTTCTGATGAATTTGATGCACAAAAGAACAACACTGCTAAGATGAACCAAATGGAACTTAACTCCGACAAGGAACCTAATCAATCAGTGGATAGTGAGGGAGAGGATAGCAACTGTAGTTCAGATGGTAATTTCTTTAGCATGAAGAGGTGTAGGGATGCACTTTGTAGGATGATTATTATGGACAAATTGCCATTTCGAATAGTGGAGTGTGAAGGGTTTCGAAAATTTTTACATTCATTGCAACCTAAACTTATCATGCCTTCGCGTAAAACTGTCCTTAGAGATTGTTTTCGAATTTATTTGGAAGAGATGAGGAAGTTGAAAAGAATGTTGGTGGAAAAGGAGCAACGGGTTTGTTTGACGACAGAGACTTGGACATCAATGCAAACTTTGGATTATATGGTTCTTACTGCACACTTTATTGATGATGATTGGAAATTGCAAAGGAAGATTCTGAATTTTTCTTTGATCCCTGATCATAAAGGAGATACCATTGGAGAAACGATTGAGAAATGTTTATTGGAATGGAGGATTGAGAATGTATTTACTATTATGGTAGATAATAGGAGTTATAGCGATGGAGCTCTTGCGTACTTGACAGAGAAAATAAGAAATCAAAGTGGGTTTGTTTTAAAGGGTGACTTTGCACACATTGTTAATGTTATGGCCTATGATGCTTTACAGGAACTTCAAGGTTCAACTATCAAGATTCGCAATGCTGTTGAGTATGTAAAATCATCACTGAAAGTATTAGAAACTTTCAAAACTTTTGCAACGGATGAAAAAATATCATGTGAAAAATCTCTTTGCTTAGATGTTCCTACAAGGTGGAGTTCTACATATACTATGTTGGACACAGCTCTAAAATTCCAAAAGGCTTTTGAAAGGTTAGAGGGTAAGGATAAGGAGTTCTGCTTGAAATTTGTTGAAAATGAGTGGAAGAAGATCCCTCCCCTCAGTGAAGATTGGGATAATGCTCGTGCTTTTTTGGAGTTATTGAAATTCTTTCATGGTGTTACTTTGAGGGTTTCAGGATCATCGTCGTGTGCAACGTCACTTCGTTTTTTTCATGAGATTTTCTTAATAAAGGCGATGATCGAAAAGTGCTCAAAATCCGACAATTCTCTCCTAGCTAACACTGCAAGAACTATGAAAGTCAAGTATGAAGCATTCTTGGAGGACAATGAAAGGACAAATTTTCTGTTGTATGTTCCCATTGTACTTGACCCTCGATTCAAGCTAAAATTTGTATCGTTTTCCCTCTCACATAACAAGGTGGAAAGGTCAAATGAAATGAGAAAGAAAATTGAGGATATGACAAGAAGTTTATATAATGAATACGAAGCTTCAAATGTGGAGAGCGAGGCTTCATGTAAATCTATGGATTTGGGAGAAGAGGATTATGATGATCTCGCGTTTACTAAGTTCTTGATGGAGCACGATGACTGGTATAATAAATCAGAACTGGATGTGTATTTATCCGAACCTTGTGAGGGAGCCAAGAACACGTTTAATATATTAGATTGGTGGAGAATGAATTCCTCAAAGTACAAAATCCTCAGTAAAATGGCGAAGGACATATTCGCGATCCCGCTTTCTGCTAACGTCCTAGAATCGAATTTTAGCATCGGAGATTGGATACTCGATTTATATCATAGTTCTTTACCTCCAAAAACAGCTGAGATTGTGATTTGTTTGCGAAATTGGCTTTGCTCACAAAAGAATATCTATACTGATGATGAAATAACTGATGAGATTCAATTTGAACTGCTGGAGAATGGTAATAAGTTTATAATCTGAATGACAACTGTAAGTGGAAATTATGTTTTGTATGACACTAATTTGTTTTGTGTCTCTTACTTGTAGGAGGGTTTCAATCAACATACATGGAGCTGGAGACAGGCAATTAG ATGCAAGTACCGGGGACAGCCTTGTTAATCGTTAGGGCTTCCATCAAATTCTTTTACTTCTTCCGCCGCTCAATCTTCGTCTTTCTCTCTTACTTCTTGACTCTTCCAACTTTGCCGTCGCCCGCCGCATCCCTCTCTCCCGGCGTCGCCTCCCGCGACTCGGACCTCTGCAGTCGCCTTCCATTGTCGGCGCCTCGTGAGAAGCTATTTTTGTCGCTCTCGTCAGCTCGTTTGGCCTTGTCAAGCATGGATCCTTGCCATACTAGGGAGGAAGATGCTAACATTGGAAAGAAACATGAGTCTGATCCATCAAATCCAATTAGAAAGAACAAACGTAAGCCTGAAGTTGATGGAGGGAATTCTGATACTGATAGTGGCAGAGCTTCTGATGAATTTGATGCACAAAAGAACAACACTGCTAAGATGAACCAAATGGAACTTAACTCCGACAAGGAACCTAATCAATCAGTGGATAGTGAGGGAGAGGATAGCAACTGTAGTTCAGATGCTTCAAATGTGGAGAGCGAGGCTTCATGTAAATCTATGGATTTGGGAGAAGAGGATTATGATGATCTCGCGTTTACTAAGTTCTTGATGGAGCACGATGACTGGTATAATAAATCAGAACTGGATGTGTATTTATCCGAACCTTGTGAGGGAGCCAAGAACACGTTTAATATATTAGATTGGTGGAGAATGAATTCCTCAAAGTACAAAATCCTCAGTAAAATGGCGAAGGACATATTCGCGATCCCGCTTTCTGCTAACGTCCTAGAATCGAATTTTAGCATCGGAGATTGGATACTCGATTTATATCATAGTTCTTTACCTCCAAAAACAGCTGAGATTGTGATTTGTTTGCGAAATTGGCTTTGCTCACAAAAGAATATCTATACTGATGATGAAATAACTGATGAGATTCAATTTGAACTGCTGGAGAATGGAGGGTTTCAATCAACATACATGGAGCTGGAGACAGGCAATTAG ATGCAAGTACCGGGGACAGCCTTGTTAATCGTTAGGGCTTCCATCAAATTCTTTTACTTCTTCCGCCGCTCAATCTTCGTCTTTCTCTCTTACTTCTTGACTCTTCCAACTTTGCCGTCGCCCGCCGCATCCCTCTCTCCCGGCGTCGCCTCCCGCGACTCGGACCTCTGCAGTCGCCTTCCATTGTCGGCGCCTCGTGAGAAGCTATTTTTGTCGCTCTCGTCAGCTCGTTTGGCCTTGTCAAGCATGGATCCTTGCCATACTAGGGAGGAAGATGCTAACATTGGAAAGAAACATGAGTCTGATCCATCAAATCCAATTAGAAAGAACAAACGTAAGCCTGAAGTTGATGGAGGGAATTCTGATACTGATAGTGGCAGAGCTTCTGATGAATTTGATGCACAAAAGAACAACACTGCTAAGATGAACCAAATGGAACTTAACTCCGACAAGGAACCTAATCAATCAGTGGATAGTGAGGGAGAGGATAGCAACTGTAGTTCAGATGCTTCAAATGTGGAGAGCGAGGCTTCATGTAAATCTATGGATTTGGGAGAAGAGGATTATGATGATCTCGCGTTTACTAAGTTCTTGATGGAGCACGATGACTGGTATAATAAATCAGAACTGGATGTGTATTTATCCGAACCTTGTGAGGGAGCCAAGAACACGTTTAATATATTAGATTGGTGGAGAATGAATTCCTCAAAGTACAAAATCCTCAGTAAAATGGCGAAGGACATATTCGCGATCCCGCTTTCTGCTAACGTCCTAGAATCGAATTTTAGCATCGGAGATTGGATACTCGATTTATATCATAGTTCTTTACCTCCAAAAACAGCTGAGATTGTGATTTGTTTGCGAAATTGGCTTTGCTCACAAAAGAATATCTATACTGATGATGAAATAACTGATGAGATTCAATTTGAACTGCTGGAGAATGGAGGGTTTCAATCAACATACATGGAGCTGGAGACAGGCAATTAG MQVPGTALLIVRASIKFFYFFRRSIFVFLSYFLTLPTLPSPAASLSPGVASRDSDLCSRLPLSAPREKLFLSLSSARLALSSMDPCHTREEDANIGKKHESDPSNPIRKNKRKPEVDGGNSDTDSGRASDEFDAQKNNTAKMNQMELNSDKEPNQSVDSEGEDSNCSSDASNVESEASCKSMDLGEEDYDDLAFTKFLMEHDDWYNKSELDVYLSEPCEGAKNTFNILDWWRMNSSKYKILSKMAKDIFAIPLSANVLESNFSIGDWILDLYHSSLPPKTAEIVICLRNWLCSQKNIYTDDEITDEIQFELLENGGFQSTYMELETGN Homology
BLAST of Tan0020204 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16 Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 2.5e-13 Identity = 45/134 (33.58%), Postives = 73/134 (54.48%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.5e-13 Identity = 45/134 (33.58%), Postives = 73/134 (54.48%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 7.4e-13 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.4e-11 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 0
BLAST of Tan0020204 vs. NCBI nr
Match: TXG72885.1 (hypothetical protein EZV62_001464 [Acer yangbiense]) HSP 1 Score: 110.9 bits (276), Expect = 2.1e-20 Identity = 59/120 (49.17%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Tan0020204 vs. NCBI nr
Match: KAF7826472.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Senna tora]) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-20 Identity = 56/129 (43.41%), Postives = 82/129 (63.57%), Query Frame = 0
BLAST of Tan0020204 vs. NCBI nr
Match: XP_030936903.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus lobata]) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-19 Identity = 60/146 (41.10%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Tan0020204 vs. NCBI nr
Match: KAF7130067.1 (hypothetical protein RHSIM_Rhsim10G0136600 [Rhododendron simsii]) HSP 1 Score: 107.5 bits (267), Expect = 2.3e-19 Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0
BLAST of Tan0020204 vs. NCBI nr
Match: KAF7130655.1 (hypothetical protein RHSIM_Rhsim10G0136400 [Rhododendron simsii]) HSP 1 Score: 107.1 bits (266), Expect = 3.0e-19 Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy TrEMBL
Match: A0A5C7IUL9 (BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001464 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.0e-20 Identity = 59/120 (49.17%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy TrEMBL
Match: A0A5B7B4D6 (BED-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_033208 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-20 Identity = 61/143 (42.66%), Postives = 84/143 (58.74%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy TrEMBL
Match: A0A7N2MJW3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 6.5e-20 Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy TrEMBL
Match: A0A7N2KQS5 (BED-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 8.5e-20 Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of Tan0020204 vs. ExPASy TrEMBL
Match: A0A5A7U8W5 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00790 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.2e-19 Identity = 55/149 (36.91%), Postives = 89/149 (59.73%), Query Frame = 0
BLAST of Tan0020204 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 86.7 bits (213), Expect = 3.9e-17 Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Tan0020204 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08 Identity = 35/104 (33.65%), Postives = 52/104 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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