Tan0020177 (gene) Snake gourd v1

Overview


Name	Tan0020177
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG07: 31986981 .. 31987451 (+)
RNA-Seq Expression	Tan0020177
Synteny	Tan0020177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGTCTCAACCTGATCCTTTAGTTTCGAGGGGAATGAACAATAACTCTAAAGAATCTGGTGATGACACTTCTGCAGAAATCACAAGAAATAAATTGGTAGTTGATAGAGATGATGAGAACAGGGGGATTTCATTGAGCTTGTCTATCAATTTTGATCCTCACGAGGTCAATAAAGATGTGGTGATGGATCTTAATAATCCTCATCAAATAGACTCTTCAACAGAGGGGGATCGAATTGATCCAACTAGGCCTCAAGGAAGGAGAAAATATGGCCCTAGGTCTAAACAGGAATCCCAAAGGGTTCAAATGATGTCGAGCACCTATTCAGAGAGGGAGGACAAAAGTAAAGGAAAGCATAGGATGGTGGATCAAGTAAATGAAACTGTCTTTTATAAAATACAACGAGTTGATGAGTTGGATTTGATGTTAGCGGAGGTTGTGATGCAACCTCGCCAATCATTATAA

mRNA sequence

ATGGATCAGTCTCAACCTGATCCTTTAGTTTCGAGGGGAATGAACAATAACTCTAAAGAATCTGGTGATGACACTTCTGCAGAAATCACAAGAAATAAATTGGTAGTTGATAGAGATGATGAGAACAGGGGGATTTCATTGAGCTTGTCTATCAATTTTGATCCTCACGAGGTCAATAAAGATGTGGTGATGGATCTTAATAATCCTCATCAAATAGACTCTTCAACAGAGGGGGATCGAATTGATCCAACTAGGCCTCAAGGAAGGAGAAAATATGGCCCTAGGTCTAAACAGGAATCCCAAAGGGTTCAAATGATGTCGAGCACCTATTCAGAGAGGGAGGACAAAAGTAAAGGAAAGCATAGGATGGTGGATCAAGTAAATGAAACTGTCTTTTATAAAATACAACGAGTTGATGAGTTGGATTTGATGTTAGCGGAGGTTGTGATGCAACCTCGCCAATCATTATAA

Coding sequence (CDS)

ATGGATCAGTCTCAACCTGATCCTTTAGTTTCGAGGGGAATGAACAATAACTCTAAAGAATCTGGTGATGACACTTCTGCAGAAATCACAAGAAATAAATTGGTAGTTGATAGAGATGATGAGAACAGGGGGATTTCATTGAGCTTGTCTATCAATTTTGATCCTCACGAGGTCAATAAAGATGTGGTGATGGATCTTAATAATCCTCATCAAATAGACTCTTCAACAGAGGGGGATCGAATTGATCCAACTAGGCCTCAAGGAAGGAGAAAATATGGCCCTAGGTCTAAACAGGAATCCCAAAGGGTTCAAATGATGTCGAGCACCTATTCAGAGAGGGAGGACAAAAGTAAAGGAAAGCATAGGATGGTGGATCAAGTAAATGAAACTGTCTTTTATAAAATACAACGAGTTGATGAGTTGGATTTGATGTTAGCGGAGGTTGTGATGCAACCTCGCCAATCATTATAA

Protein sequence

MDQSQPDPLVSRGMNNNSKESGDDTSAEITRNKLVVDRDDENRGISLSLSINFDPHEVNKDVVMDLNNPHQIDSSTEGDRIDPTRPQGRRKYGPRSKQESQRVQMMSSTYSEREDKSKGKHRMVDQVNETVFYKIQRVDELDLMLAEVVMQPRQSL

Homology

The following BLAST results are available for this feature:

BLAST of Tan0020177 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020177 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020177 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020177 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020177.1	Tan0020177.1	mRNA