Tan0020162 (gene) Snake gourd v1

Overview


Name	Tan0020162
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	psbP-like protein 1, chloroplastic
Location	LG11: 6536899 .. 6540563 (-)
RNA-Seq Expression	Tan0020162
Synteny	Tan0020162

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGGGTGAGGGGCCGACGCAAGAAATGTGGCTGAGCGAACCCGCGAGCGCGAACACAACGGATAGGAAAATCCAAGAACAGAACCAAAAGATAAGGTCATCTCACATTAACGAAGCACACGCTTCACAGACAACACAAAGGACCTTCAATGGCTTCTCTGCATTGCTCGCCCTCTGTCCAAAAGTCTCTCTTCGTCAATTCTCTTCCTCAGGTTCACAATTCATTGGAAATCTTTTCAATTTTGGTTTCTGTTTTTTGCCAGTCCCATATTCTGATTGACGATCGGTAATGTTTTGTTGCTCACAGAAACTCCATGGAAGATTTCTTTGCTGCAGGGCAGGGATTTCATTTATTGTCAGGGCCGAGCAAGCACACGGGTCTTCCATTAATGGCCATGCCTGCAGTTCCGAAGGTCAGTTTAGCGAATTGAGATGGAAAATTCAGTTGTCACTTGAATTTGAGTATTTATTATACTGGAATTTAGCTTGGCTTTTCGAGTTAATTGAATGTGCATGTCGTTCAGTGACCGTGTTAAGTATCGAGATGATTTGGTGGAAGTAAATTGAGAGTGTAGAAAGTTTTATAACTTTTAATAATCCGCCACCCCCATACTGATATATTGAAGTAATAGAAAGAAACCACATAGCAAACTAGTGAATGAAAAGGAGATTAAAACAAAGTGAGACATATACTATGCAAATCTTCTTTAAAGGACATAGTTTCGCCCTAATTTGTGAGCACCGTGGTATTACGAGTGCCTGTTACCCTACATACGATATTATTTACATGATTAATCCTCCTTTTCATTACCAAAAACTCATTGTGTGAACTGACGATAGCAAACTAATCTCAAACTAGTTTGAATTATTGTTTTAGAAGAGATATTAGTTCAAACTAATGTAAGAATAAGTTGATTGGGTAGTGTCAAACCGCACCGACCTCGACTCCAAGACGTGGAAGCAAATGATGGAAGTCGTGGATTCATACTAGAGATTTTAATCCCACATTCCCATTTTGTCAAGGATGAAGATTGCTATATGCGTGGAAAAGCATTCTGCTTCAAGGAAAATTACCTCAGGCTGAAATCTCAGTCATGACAGGCTATTATGGATTGTCTTCTTTGCCAGCTTACCACGTACTGTTTCTTCAATTCTTATATCACTTAAATGGCATTTTCTGGCTTGTATGATTTTTATCACAATTCAGGCATTTTTTATGCTGCTTTATATCTCTTCCCGTGGATGATCTCACTGCATTCTTATCAGCTCTAGAAACTATATTAAAGAATTTCATTTTTCAATAGTTGCTCTGTTTTTTGGCAGATAGACTTGGGAGACGCCAGCTGCTGACTGGCAGTGCCTTTATCACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATGTAATATTTATCCCTCCCATTACTTACCGATACCATACATTTCCCTTTCATTTTCGTTGCTTTTGTTCAAGAAGTTTAATTCTGAAATTAGTACCTCTAGTGTGCACTGTATTTCTTTCTTCCAAATTGAAGGATGACGATATCCTAAGAGTGCCCGCTTGATATTGCTCAGTTGCTGCAGAAACAAAGAAAGGTTTTCTATCAGTTTCAGACAAGAAAGACGGTTACTCATTTGTCTATCCATTTGGGTGGCAGGTACACTAATTGTTCAGCTTTTGGTTTCCTCCACTTCCGTACTTTTGCACACACAATCCACTTTAAAATTGACTACTTGGCGTAAGATGCACGTTTCAAAGTCTTTTTTTCACTCGAGGAGTGAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATATGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGCCCCCTCAACAGGTTAGCAATAAAATGTTGGAATAATGCAATAAGTTGTTGTTTTAACTTTTAGGTAACTTCAGTGAGTATCTTATGGTTCAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCCTCTAATCAAAAAACGAAGTTGATTGAGGCATCAGAGGTTTGACTATCTGTACTCTTGTATGAGATGATTTTATCATAGTTGCTTAGAACTTAGGGATGCAGTTGTACAACCTATTGAACAGATCATGTTCAAGTAAGGTCGTTTTATCATACTAGTTGCTATGGAGTTACATAATTAAATAGTTGCTGTAAATGGACTTGCCCATTAAATCTGATGCACAGTCATAACTCGACACTGGTGGAAGGTTCTTCAGAATATTGTTCTGTAATTGTCCTTGGCGACATTGTAAATCAATCTTCTGAACGGAAAATACACCCAAAAGTAAAACCAATGCACTAATGTAATCTGTGAAGTGAAGTCCATCAGTTCATCCATCTATTCCAAACACGTGACTACAAAATTGATGATAGAACCCACTCCAATGAGGTCGCTTGTCACTTCTTGGGCATCTTATATTCATTTTTCGGTAGAAGATATGCTCCAAACTACAGTTTAGCACATGTTTCTTCAAGTGATAACAACCAATAACCTACTTATTAATTTGTTTTTAACGTTCAAAAGCTAGTCCATGTGAGCAAGTGTCCCAAGTTGTGTTAGTTACTGGCTTTGTTGCATCTCATATGACTGTTGATTAACTAAAGGTTGTCTTTTACCTGAGGCTCATACATGCTTTTGGAGGAGTTCAAACTTGTCTGACTTTTCAAGCCTTTGTGACTCTACAATTGTTCTATCATTATTTCAAAATTACAATGAGAGAAGCATCTTTGTTAGCAGAAAAAGGAAATTTTCACCTTTGCTATGTGCTCATTGGTCTGTCTTGATGAATGATGCAGCATGACGTTGATGGGAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACAATAGCTGTTGCCAATGGTATGAAACTTCGATAGTCTTATTTTGTTGTTGCTGGGGAACTTCTTTTCCAAGTTAATCTTGTTCTTTTATTCTATCTAAGTATTTTAGGCCTCTTCAACAAATTCTATTGAGACGAATTTGTTTTCATAGGAAAGATGAAACTATTGTAGAGAAATGATGAGAAAACAAACACAATTCTCAAAAACAAAAACCAAAAAACAAATGGTTATGAAATGGGAGATGAAGTAATGGTATTCTTGGGATCCAATAATTTTGAACAACAAAAAGGACTTTATTTTTAAAACCAATTCCCAAACAAAGCAGCTCTTTAATGTGAAGTTTATCCTTAATTGTTCCATGGCAGGAAAATTCTACACATTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGGACAGTTGTTGATTCCTTCACAATTTCAAACGTTTGATGGTGTTGTGTTCACATTATTCCAACGCCATTTTGATTCTCTCAGGTTGTTTAGAACTAAGCCTTCGGTAATTTATCCGCACCTTTTATATGCTTTAATTTAATTCTTTGGATCGAGGAGTGAGTTTAGAGGGATTGCAACGCTTTGTATTATCCGATGTATATGTATAAGAATGCAATAACACCAAAAAGTTTCATCTCATTCGTATATCCTAAGAAGGGTCCGTTTGGGATTTGATTTGGCAAGGGTCGAAACTC

mRNA sequence

AAACGGGTGAGGGGCCGACGCAAGAAATGTGGCTGAGCGAACCCGCGAGCGCGAACACAACGGATAGGAAAATCCAAGAACAGAACCAAAAGATAAGGTCATCTCACATTAACGAAGCACACGCTTCACAGACAACACAAAGGACCTTCAATGGCTTCTCTGCATTGCTCGCCCTCTGTCCAAAAGTCTCTCTTCGTCAATTCTCTTCCTCAGAAACTCCATGGAAGATTTCTTTGCTGCAGGGCAGGGATTTCATTTATTGTCAGGGCCGAGCAAGCACACGGGTCTTCCATTAATGGCCATGCCTGCAGTTCCGAAGATAGACTTGGGAGACGCCAGCTGCTGACTGGCAGTGCCTTTATCACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGTTTTCTATCAGTTTCAGACAAGAAAGACGGTTACTCATTTGTCTATCCATTTGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATATGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGCCCCCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCCTCTAATCAAAAAACGAAGTTGATTGAGGCATCAGAGCATGACGTTGATGGGAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACAATAGCTGTTGCCAATGGAAAATTCTACACATTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGGACAGTTGTTGATTCCTTCACAATTTCAAACGTTTGATGGTGTTGTGTTCACATTATTCCAACGCCATTTTGATTCTCTCAGGTTGTTTAGAACTAAGCCTTCGGTAATTTATCCGCACCTTTTATATGCTTTAATTTAATTCTTTGGATCGAGGAGTGAGTTTAGAGGGATTGCAACGCTTTGTATTATCCGATGTATATGTATAAGAATGCAATAACACCAAAAAGTTTCATCTCATTCGTATATCCTAAGAAGGGTCCGTTTGGGATTTGATTTGGCAAGGGTCGAAACTC

Coding sequence (CDS)

ATGGCTTCTCTGCATTGCTCGCCCTCTGTCCAAAAGTCTCTCTTCGTCAATTCTCTTCCTCAGAAACTCCATGGAAGATTTCTTTGCTGCAGGGCAGGGATTTCATTTATTGTCAGGGCCGAGCAAGCACACGGGTCTTCCATTAATGGCCATGCCTGCAGTTCCGAAGATAGACTTGGGAGACGCCAGCTGCTGACTGGCAGTGCCTTTATCACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGTTTTCTATCAGTTTCAGACAAGAAAGACGGTTACTCATTTGTCTATCCATTTGGGTGGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTCAATATGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGCCCCCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTCTAGCTCCCTCTAATCAAAAAACGAAGTTGATTGAGGCATCAGAGCATGACGTTGATGGGAAAGCATACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACAATAGCTGTTGCCAATGGAAAATTCTACACATTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGGACAGTTGTTGATTCCTTCACAATTTCAAACGTTTGA

Protein sequence

MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLGRRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISNV

Homology

[Close]

BLAST of Tan0020162 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.4e-79
Identity = 154/241 (63.90%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLF-VNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRL 60
           MASL  SPS   S+  V  +P          + G+SF+V+AE  H SS + H    +D+ 
Sbjct: 1   MASLKLSPSSPISISKVGVIPSS--------KKGLSFLVKAEH-HSSSSSSHL---QDKC 60

Query: 61  GRRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQD 120
            RR ++T      WISL     +SFAAE+KKGFL+VSD KD Y+F+YPFGWQEVVI+GQD
Sbjct: 61  QRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQD 120

Query: 121 KVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDV 180
           KV+KDVIEPLESVSVN++PTSK+ I++FGPP+Q+AETLIKKVLAP NQKT LI+ASEHDV
Sbjct: 121 KVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDV 180

Query: 181 DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTI 240
           DGK YY FEF  QA NYTRHAL TI V NG FYTLTTGANERRWEKMKD+L TVVDSF I
Sbjct: 181 DGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKI 229

[Close]

BLAST of Tan0020162 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-31
Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 46  SSINGHACSSEDRLGRRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFV 105
           SS + +   S +   RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ 
Sbjct: 44  SSESTYQKGSGNNWKRRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYY 103

Query: 106 YPFGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPS 165
           YP  W+E      D  FKD    L++V V  IPT K DI + GP ++V   L+K   A  
Sbjct: 104 YPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAP 163

Query: 166 NQKTKLIEASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEK 225
           NQ   + +  E   DGK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K
Sbjct: 164 NQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRK 223

Query: 226 MKDKLRTVVDSFTISNV 243
           +K +L+ V DS  I  +
Sbjct: 224 VKKQLQVVADSLKILQI 238

[Close]

BLAST of Tan0020162 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-08
Identity = 56/208 (26.92%), Postives = 92/208 (44.23%), Query Frame = 0


Query: 58  RLGRRQLLTGSAFITWISLADMNSMSFA-----AETKKGFLSVSDKKDGYSFVYPFGW-- 117
           RL    L+ G+A  + +S AD      A      +T   F +V+   DG+  + P  W  
Sbjct: 58  RLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTG--DGFKILIPSKWNP 117

Query: 118 -QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQ--------------VAE 177
            +EV   GQ   ++D  +   +V V + PT K+ I+D+G P+Q                +
Sbjct: 118 SKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGK 177

Query: 178 TLIKKVLAPSNQKT-KLIEASEHDVDGKAYYTFEFV---AQAPNYTRHALSTIAVANGKF 237
           T+ +    P+  +T  ++E S   V GK YY+   +   A      +H L T  V++GK 
Sbjct: 178 TISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKL 237

Query: 238 YTLTTGANERRWEK-MKDKLRTVVDSFT 239
           Y     A ++RW K  K  + +   SF+
Sbjct: 238 YICKAQAGDKRWFKGAKKFVESAASSFS 263

[Close]

BLAST of Tan0020162 vs. ExPASy Swiss-Prot
Match: Q04127 (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBP3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 67/272 (24.63%), Postives = 108/272 (39.71%), Query Frame = 0


Query: 1   MASLHC-------SPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHAC 60
           MAS  C       S   + SL    +P     + L CRA      + +Q+     N ++ 
Sbjct: 1   MASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRA------QNKQSAPQQDNVNSV 60

Query: 61  SSEDRLGRRQLLTGSAFITWISLADM---NSMSFAAETKKGFLSVSDKKDGYSFVYPFGW 120
           S   RL    L+  +A  + +S AD     + +   + K      +   DG+    P  W
Sbjct: 61  SVSRRLALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKW 120

Query: 121 ---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQ----QVAETLIKKVLA 180
              +EV   GQ   F+D  +   +V V + PT K+ I DFG P+    QV   L ++  +
Sbjct: 121 NPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYS 180

Query: 181 PSNQK-----------TKLIEASEHDVDGKAYYTFEFVAQAPNYT---RHALSTIAVANG 240
                             ++E S  +V GK YY    + +  +     +H L T  V +G
Sbjct: 181 GKTDSEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDG 240

[Close]

BLAST of Tan0020162 vs. ExPASy Swiss-Prot
Match: O49080 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=64177 GN=PSBP PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 61/231 (26.41%), Postives = 102/231 (44.16%), Query Frame = 0


Query: 37  IVRAEQAHGSSINGHACSSEDRLGRRQLLTGSAFITWISLA-----DMNSMSFAAETKKG 96
           I RA+++  +  N     S  RL    L+  +A  T I+ A     +  ++   A+T   
Sbjct: 37  ICRAQKSSDTDENSSTAVSR-RLALTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTD 96

Query: 97  FLSVSDKKDGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFG 156
           FL  +   DG++ + P  W   +EV   GQ   ++D  +   +VSV + PTSK+ I D+G
Sbjct: 97  FLPYTG--DGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKKSITDYG 156

Query: 157 PPQQVAET----LIKKVLA----------PSNQKT-KLIEASEHDVDGKAYYTFEFV--- 216
            P++   T    L K+  +          P +  T  ++E S   V GK YY    +   
Sbjct: 157 TPEEFLSTVDYLLGKQAYSGKTASEGGFDPDSVATANILEVSTPVVGGKQYYNISVLTRT 216

Query: 217 AQAPNYTRHALSTIAVANGKFYTLTTGANERRWEK-MKDKLRTVVDSFTIS 241
           A      +H + +  V +GK Y     A ++RW K  K  + +   SF ++
Sbjct: 217 ADGDEGGKHHVISATVTDGKLYICKAQAGDKRWFKGAKKFVESTTTSFNVA 264

[Close]

BLAST of Tan0020162 vs. NCBI nr
Match: XP_038890216.1 (psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127
Identity = 229/242 (94.63%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHCSPS+Q SLFVNSLPQKLHGRF+CCRAG+SF++RAEQAHGSSIN H CSSEDRLG
Sbjct: 1   MASLHCSPSLQNSLFVNSLPQKLHGRFVCCRAGVSFLLRAEQAHGSSINAHGCSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVNMIPTSKEDIRDFG PQQVAETLIKKVLAPSNQ+TKLIEASEHDV+
Sbjct: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIEASEHDVN 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

Query: 241 NV 243
           NV
Sbjct: 241 NV 242

[Close]

BLAST of Tan0020162 vs. NCBI nr
Match: XP_022134529.1 (psbP-like protein 1, chloroplastic [Momordica charantia])

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125
Identity = 228/242 (94.21%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHCS SVQ SLFVNSL QKL GRF+CCRAGISF+VRAEQAH SSINGHACSSEDRLG
Sbjct: 1   MASLHCSSSVQNSLFVNSLSQKLRGRFICCRAGISFLVRAEQAHASSINGHACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVI GQDK
Sbjct: 61  RRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIAGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVN+IPT KEDIRDFGPP+QVAETLIKKVLAPSNQKTKLIEASEHDVD
Sbjct: 121 VFKDVIEPLESVSVNLIPTGKEDIRDFGPPEQVAETLIKKVLAPSNQKTKLIEASEHDVD 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVV+SFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVESFTIS 240

Query: 241 NV 243
           NV
Sbjct: 241 NV 242

[Close]

BLAST of Tan0020162 vs. NCBI nr
Match: XP_023551143.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.4 bits (1178), Expect = 3.9e-125
Identity = 225/242 (92.98%), Postives = 234/242 (96.69%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHC P VQKSLF+NSLPQKLHGR +CCRAGISF+VRAE+A GSS+NGHACSSEDRLG
Sbjct: 1   MASLHCLPPVQKSLFINSLPQKLHGRSVCCRAGISFLVRAERARGSSVNGHACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL GSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLE+VSVNMIPTSKEDIRDFG PQQ+AETLIKKVLAPSNQ+TKLIEASEHD+D
Sbjct: 121 VFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEHDID 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

Query: 241 NV 243
            V
Sbjct: 241 KV 242

[Close]

BLAST of Tan0020162 vs. NCBI nr
Match: XP_022921417.1 (psbP-like protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 457.2 bits (1175), Expect = 8.7e-125
Identity = 224/242 (92.56%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHCSPS+ KS FVNSLPQ+L GRF+CCRAGISF+VRAEQAHGSS NG ACSSEDRLG
Sbjct: 1   MASLHCSPSIHKSFFVNSLPQRLRGRFVCCRAGISFLVRAEQAHGSSSNGQACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL GS+FITWISLADMNSMSFAAE+KKGFLSV+DK DGYSF+YPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSSFITWISLADMNSMSFAAESKKGFLSVTDKTDGYSFLYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVN+IPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEH+VD
Sbjct: 121 VFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHEVD 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

Query: 241 NV 243
           NV
Sbjct: 241 NV 242

[Close]

BLAST of Tan0020162 vs. NCBI nr
Match: KAG6602343.1 (PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124
Identity = 224/242 (92.56%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHCSPS+ KS FVNSLPQ+L GRF+CCRAGISF+VRAEQAHGSS NG ACSSEDRLG
Sbjct: 1   MASLHCSPSIHKSFFVNSLPQRLRGRFVCCRAGISFLVRAEQAHGSSGNGQACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL GS+FITWISLADMNSMSFAAE+KKGFLSV+DK DGYSF+YPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSSFITWISLADMNSMSFAAESKKGFLSVTDKTDGYSFLYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVN+IPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEH+VD
Sbjct: 121 VFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHEVD 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

Query: 241 NV 243
           NV
Sbjct: 241 NV 242

[Close]

BLAST of Tan0020162 vs. ExPASy TrEMBL
Match: A0A6J1BYZ6 (psbP-like protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006749 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.5e-126
Identity = 228/242 (94.21%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHCS SVQ SLFVNSL QKL GRF+CCRAGISF+VRAEQAH SSINGHACSSEDRLG
Sbjct: 1   MASLHCSSSVQNSLFVNSLSQKLRGRFICCRAGISFLVRAEQAHASSINGHACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVI GQDK
Sbjct: 61  RRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIAGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVN+IPT KEDIRDFGPP+QVAETLIKKVLAPSNQKTKLIEASEHDVD
Sbjct: 121 VFKDVIEPLESVSVNLIPTGKEDIRDFGPPEQVAETLIKKVLAPSNQKTKLIEASEHDVD 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVV+SFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVESFTIS 240

Query: 241 NV 243
           NV
Sbjct: 241 NV 242

[Close]

BLAST of Tan0020162 vs. ExPASy TrEMBL
Match: A0A6J1E0E5 (psbP-like protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111429701 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.2e-125
Identity = 224/242 (92.56%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHCSPS+ KS FVNSLPQ+L GRF+CCRAGISF+VRAEQAHGSS NG ACSSEDRLG
Sbjct: 1   MASLHCSPSIHKSFFVNSLPQRLRGRFVCCRAGISFLVRAEQAHGSSSNGQACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL GS+FITWISLADMNSMSFAAE+KKGFLSV+DK DGYSF+YPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSSFITWISLADMNSMSFAAESKKGFLSVTDKTDGYSFLYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVN+IPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEH+VD
Sbjct: 121 VFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHEVD 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

Query: 241 NV 243
           NV
Sbjct: 241 NV 242

[Close]

BLAST of Tan0020162 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.4e-125
Identity = 224/242 (92.56%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLG 60
           MASLHC P VQKSLF+NSLPQKLHGR +CCRAGISF+VRAE+A GSS+NGHACSSEDRLG
Sbjct: 1   MASLHCLPPVQKSLFINSLPQKLHGRSVCCRAGISFLVRAERARGSSVNGHACSSEDRLG 60

Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLL GSAFITWI LADMN MSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK
Sbjct: 61  RRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLE+VSVNMIPTSKEDIRDFG PQQ+AETLIKKVLAPSNQ+TKLIEASEHD+D
Sbjct: 121 VFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEHDID 180

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240

Query: 241 NV 243
            V
Sbjct: 241 KV 242

[Close]

BLAST of Tan0020162 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.6e-124
Identity = 223/234 (95.30%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 9   SVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLGRRQLLTGS 68
           S+Q SLF+NSLPQKLHGRF+CCRAG+SF+VRAEQAHGSSINGHACSSEDRLGRRQLL+GS
Sbjct: 3   SLQNSLFINSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLSGS 62

Query: 69  AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP 128
           AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP
Sbjct: 63  AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP 122

Query: 129 LESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVDGKAYYTFE 188
           LE+VSVN+IPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDV+GKAYYTFE
Sbjct: 123 LENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFE 182

Query: 189 FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISNV 243
           FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS+V
Sbjct: 183 FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISSV 236

[Close]

BLAST of Tan0020162 vs. ExPASy TrEMBL
Match: A0A5D3C3H9 (PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002630 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.6e-124
Identity = 223/234 (95.30%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 9   SVQKSLFVNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRLGRRQLLTGS 68
           S+Q SLF+NSLPQKLHGRF+CCRAG+SF+VRAEQAHGSSINGHACSSEDRLGRRQLL+GS
Sbjct: 3   SLQNSLFLNSLPQKLHGRFVCCRAGVSFLVRAEQAHGSSINGHACSSEDRLGRRQLLSGS 62

Query: 69  AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP 128
           AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP
Sbjct: 63  AFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEP 122

Query: 129 LESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVDGKAYYTFE 188
           LESVSVN+IPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDV+GKAYYTFE
Sbjct: 123 LESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVNGKAYYTFE 182

Query: 189 FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISNV 243
           FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVV+SFTIS+V
Sbjct: 183 FVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVESFTISSV 236

[Close]

BLAST of Tan0020162 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 296.2 bits (757), Expect = 2.4e-80
Identity = 154/241 (63.90%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MASLHCSPSVQKSLF-VNSLPQKLHGRFLCCRAGISFIVRAEQAHGSSINGHACSSEDRL 60
           MASL  SPS   S+  V  +P          + G+SF+V+AE  H SS + H    +D+ 
Sbjct: 1   MASLKLSPSSPISISKVGVIPSS--------KKGLSFLVKAEH-HSSSSSSHL---QDKC 60

Query: 61  GRRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQD 120
            RR ++T      WISL     +SFAAE+KKGFL+VSD KD Y+F+YPFGWQEVVI+GQD
Sbjct: 61  QRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQD 120

Query: 121 KVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDV 180
           KV+KDVIEPLESVSVN++PTSK+ I++FGPP+Q+AETLIKKVLAP NQKT LI+ASEHDV
Sbjct: 121 KVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDV 180

Query: 181 DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTI 240
           DGK YY FEF  QA NYTRHAL TI V NG FYTLTTGANERRWEKMKD+L TVVDSF I
Sbjct: 181 DGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKI 229

[Close]

BLAST of Tan0020162 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 46  SSINGHACSSEDRLGRRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFV 105
           SS + +   S +   RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ 
Sbjct: 44  SSESTYQKGSGNNWKRRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYY 103

Query: 106 YPFGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPS 165
           YP  W+E      D  FKD    L++V V  IPT K DI + GP ++V   L+K   A  
Sbjct: 104 YPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAP 163

Query: 166 NQKTKLIEASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEK 225
           NQ   + +  E   DGK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K
Sbjct: 164 NQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRK 223

Query: 226 MKDKLRTVVDSFTISNV 243
           +K +L+ V DS  I  +
Sbjct: 224 VKKQLQVVADSLKILQI 238

[Close]

BLAST of Tan0020162 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-32
Identity = 71/182 (39.01%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
            FKD    L++V V  IPT K DI + GP ++V   L+K   A  NQ   + +  E   D
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 170

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS  I 
Sbjct: 171 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 230

Query: 241 NV 243
            +
Sbjct: 231 QI 230

[Close]

BLAST of Tan0020162 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 61  RRQLLTGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASE 177
            FKD    L++V V  IPT K DI + GP ++V   L+K   A  NQ   + +  E
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

The following BLAST results are available for this feature:

BLAST of Tan0020162 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82538	3.4e-79	63.90	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O80634	2.0e-31	37.56	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
Q40407	2.4e-08	26.92	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]
Q04127	9.0e-08	24.63	Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum OX=4097...	[more]
O49080	9.0e-08	26.41	Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=641...	[more]

BLAST of Tan0020162 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890216.1	2.4e-127	94.63	psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_022134529.1	1.8e-125	94.21	psbP-like protein 1, chloroplastic [Momordica charantia]	[more]
XP_023551143.1	3.9e-125	92.98	psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022921417.1	8.7e-125	92.56	psbP-like protein 1, chloroplastic [Cucurbita moschata]	[more]
KAG6602343.1	1.5e-124	92.56	PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Tan0020162 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYZ6	8.5e-126	94.21	psbP-like protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100674...	[more]
A0A6J1E0E5	4.2e-125	92.56	psbP-like protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111429701...	[more]
A0A6J1JSB4	9.4e-125	92.56	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KS54	1.6e-124	95.30	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 S...	[more]
A0A5D3C3H9	3.6e-124	95.30	PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G0...	[more]

BLAST of Tan0020162 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55330.1	2.4e-80	63.90	PsbP-like protein 1	[more]
AT2G39470.1	1.4e-32	37.56	PsbP-like protein 2	[more]
AT2G39470.2	1.9e-32	39.01	PsbP-like protein 2	[more]
AT2G39470.3	5.6e-13	34.48	PsbP-like protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 43..191 e-value: 7.7E-51 score: 172.3
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 31..192 e-value: 1.1E-50 score: 174.0
None	No IPR available	PANTHER	PTHR31407:SF4	PSBP-LIKE PROTEIN 1, CHLOROPLASTIC	coord: 12..192
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 12..192
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 47..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020162.1	Tan0020162.1	mRNA
Tan0020162.2	Tan0020162.2	mRNA
Tan0020162.3	Tan0020162.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding