Tan0020144 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCGACAAGCCTTCATTCTCTTAACGTGCACGGCGGCCGCCGTCATCGGGCTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAAGAGCGCCGACGGACGACGGGGGCAGAGAGATGGTGGTGGGCAGCGGGGAGACGGGGCGGCGGAGAGACGCCGATCCGGCTGTTGGGCGGAGAAGGGGAAGGGGATCAAGAATTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGCGGCCGATATTAATGGGGGAAAAATGTGAAATGCTGAAATACAGTGGGCTTATTTTATATGATGAAAGGGGAAGAATGCTGCAGGATCAAATTGCCGCCATGGAAAATGGTCACAAGGTGCTGCTTCGTAAGTTCTTTCCGGTTTTTATTTATTTCATTTTGGTTTCAATTTCAATCTTTTAATTTAATTAAAAAACTTCAATCAAACCATATATTTTTAAATTAATATTTTTTTGTCTTATTTACTAAAGTATGTTGGAGTCCGTACTTTCAAATGTTTGATTTGATCTTACCACTTCTCAAAAACGATAGTTCCAACAACCCTTTTATTCTTTTGATTTTTATTTATTTTTTTTAATTACAATTTCAACCTTTAGCTGCACTTAACATTTAATAACTTTTTCTTCCAATATTATTGTAGCGTTTTTCGTGTGTATTTTACTAACACTAACGAAAATGGTTGTCAACTCGAGCATATTTTAGTGGATAAGACATCAATTATTATTCTACAAGTGAAGATTCAATCTTCCTCCATCTTAATTATTTAACTATAAAAAAGAAAAACTTTTTGATAGTCATCGATTTTTTTAAAGTTGTGTTTGTTTTTCTTATCATTTTTCTATAATAGGTTTCATCTTTTTTAATCCGTTAAATTTTTTAGCCAAATTTCCAAAACAACAATACGTTTGATTTTTAAAATATATGTACAAAGTAATAAGAAATAAGAAACATATTTAATTTTTAAATACAAAAAATATAAATAGTATATAAACTAAAATAAATTAATATTTTAAATACAGAAACTATAATAAACCAACCGAAAGCTATTGAAATTAAATCTAGTTACGAAATCTTCCGACAATGATTTTCAATGCCATTTTTTTTAACGAGATACTTAAATCCAACGATTTATTCATTAATTGAGGTCTTTTGACTTAAAAAATGTCAAATAAATTCATGGACTTTCAATTTTGTTTCTAACACGCACTTCACACCATCAATATTTTTTAACTTTATCTAATAGAATGTTAAACTTTTTTTTTTTAATCTATAACATTTGTGTTTTATTTCATTATATTTTTTTTTTAGTACAATGAGAAATTGGGAGATTCGAACCACAAATCTCGTGGTCGTCAATACATTCATGATACCAGTTAAGCTATGCTCTCTTTGGCAACATTTGTGTTTTATTATTATTATTATTTTTTTTATCTATAACATTTTAGTTCAATTATATGAATACTCTAAATATTCATAGTGTAAAAATACTCTAAATATCATAATTATTTTTCTCAAAATTAAAAAGCTGTCCTTCCATGTATTAGTTTTTAAATTCTACATGCTAACAATTAAAAAAAAAAGTTGTATGTACATATATATATATATATATATATATTTTAAGAAAGGACATTAAAGATATGGATGATTAACAATAAAGTTGGTGTTTGTATTTGTATTGTATTATTGTCCTTAACATCACATGTTTGATACTTTGATTAATCCTATATATGCAGGAAGGAGAAGCCATGGTAGTGAAGACAAATGTTGAAGGATCTACTCTGA ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCGACAAGCCTTCATTCTCTTAACGTGCACGGCGGCCGCCGTCATCGGGCTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAAGAGCGCCGACGGACGACGGGGGCAGAGAGATGGTGGTGGGCAGCGGGGAGACGGGGCGGCGGAGAGACGCCGATCCGGCTGTTGGGCGGAGAAGGGGAAGGGGATCAAGAATTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGCGGCCGATATTAATGGGGGAAAAATGTGAAATGCTGAAATACAGTGGGCTTATTTTATATGATGAAAGGGGAAGAATGCTGCAGGATCAAATTGCCGCCATGGAAAATGGTCACAAGGTGCTGCTTCGTAAACAAATGTTGAAGGATCTACTCTGA ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCGACAAGCCTTCATTCTCTTAACGTGCACGGCGGCCGCCGTCATCGGGCTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAAGAGCGCCGACGGACGACGGGGGCAGAGAGATGGTGGTGGGCAGCGGGGAGACGGGGCGGCGGAGAGACGCCGATCCGGCTGTTGGGCGGAGAAGGGGAAGGGGATCAAGAATTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAGCGGCCGATATTAATGGGGGAAAAATGTGAAATGCTGAAATACAGTGGGCTTATTTTATATGATGAAAGGGGAAGAATGCTGCAGGATCAAATTGCCGCCATGGAAAATGGTCACAAGGTGCTGCTTCGTAAACAAATGTTGAAGGATCTACTCTGA MEALWNLEDKWKLSTRQAFILLTCTAAAVIGLCAAAWAKKRKERRRTTGAERWWWAAGRRGGGETPIRLLGGEGEGDQEFGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRMLQDQIAAMENGHKVLLRKQMLKDLL Homology
BLAST of Tan0020144 vs. NCBI nr
Match: KAG7024654.1 (hypothetical protein SDJN02_13472, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 228.0 bits (580), Expect = 5.0e-56 Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0
BLAST of Tan0020144 vs. NCBI nr
Match: KAG6591775.1 (hypothetical protein SDJN03_14121, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 227.6 bits (579), Expect = 6.6e-56 Identity = 118/147 (80.27%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of Tan0020144 vs. NCBI nr
Match: XP_022976858.1 (uncharacterized protein LOC111477103 isoform X3 [Cucurbita maxima]) HSP 1 Score: 227.6 bits (579), Expect = 6.6e-56 Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Tan0020144 vs. NCBI nr
Match: XP_023534958.1 (uncharacterized protein LOC111796532 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227.6 bits (579), Expect = 6.6e-56 Identity = 117/145 (80.69%), Postives = 128/145 (88.28%), Query Frame = 0
BLAST of Tan0020144 vs. NCBI nr
Match: XP_022935987.1 (uncharacterized protein LOC111442724 isoform X1 [Cucurbita moschata]) HSP 1 Score: 226.9 bits (577), Expect = 1.1e-55 Identity = 118/146 (80.82%), Postives = 128/146 (87.67%), Query Frame = 0
BLAST of Tan0020144 vs. ExPASy TrEMBL
Match: A0A6J1IND6 (uncharacterized protein LOC111477103 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.2e-56 Identity = 118/145 (81.38%), Postives = 126/145 (86.90%), Query Frame = 0
BLAST of Tan0020144 vs. ExPASy TrEMBL
Match: A0A6J1F750 (uncharacterized protein LOC111442724 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442724 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 5.4e-56 Identity = 118/146 (80.82%), Postives = 128/146 (87.67%), Query Frame = 0
BLAST of Tan0020144 vs. ExPASy TrEMBL
Match: A0A6J1II18 (uncharacterized protein LOC111477103 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55 Identity = 116/144 (80.56%), Postives = 125/144 (86.81%), Query Frame = 0
BLAST of Tan0020144 vs. ExPASy TrEMBL
Match: A0A6J1FC12 (uncharacterized protein LOC111442724 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442724 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.7e-54 Identity = 115/142 (80.99%), Postives = 124/142 (87.32%), Query Frame = 0
BLAST of Tan0020144 vs. ExPASy TrEMBL
Match: A0A6J1IGV7 (uncharacterized protein LOC111477103 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 8.7e-54 Identity = 118/154 (76.62%), Postives = 128/154 (83.12%), Query Frame = 0
BLAST of Tan0020144 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 5.1e-14 Identity = 57/145 (39.31%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Tan0020144 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 0
BLAST of Tan0020144 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 4.3e-05 Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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