Tan0020108 (gene) Snake gourd v1

Overview
NameTan0020108
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG05: 81916257 .. 81918362 (-)
RNA-Seq ExpressionTan0020108
SyntenyTan0020108
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTCTCAAGGAAATTCAAAACCAGGCAAAAAAGCAAAGCAGTGATCCAGAGAAATGAAGCAAGAACGAAGCGTGTTATGGTGCAAGAGAAGTGGCAGTTAATGAAGGAAGGAGAAGGACAAAAAGGAGAGACAGAAAAAGGAAGAATACGGAAACAATTCAAAACACCATGCGAGAGAGAGAATAGGTAGACAGAAAAGTAAGAGAGAAAAGGGAAAGGAAGAGAGAGGTACGTACAAAGCAAAATGGGCGCAGAAAGCTCAGTCCAGCCGTCCAGGAGAGACAAAAATGGCAGACGGAAATCGTGGATACCTGTAAATAACAAAACACTATGATCCTCAAAAAGTGAATGAAAATATATCATCGTTTCGTTTCGTTTCATTTCAACGCATTTATTGAAGAAAAAGGCATACACATACACAATGCTGCAGATGGAGACGAGGACCAATGGAGAAAAGTGAAACCCTAGAGCGGGACCGGCGGCGATGGGCGGCGACCGGCCAATTGTCGGAGGAAGGGAGGGAAGTGGGGAAGACGGAGGTTGAAAAATATAAAGGGGGGTAAAAATGAGAATAAATGGAATTTAAGATGTGACAGGCACCTATATAGAGTAGTGTTGTAGTGGGGGAAGGTAACCGTCACGTGTGCAATATTTATCCACCGGACGTGATTTTTTTTTTTTCCTTCAAAATTTATTTATCTCCATTATAATATATAATATAATATTCCTTTAAATTCTTCATTCTTCAGTGGAGCAGGGCAATGATTTTTCACATTACGTGTACTGATGTGGGCCCCATCTCATTATTATTACTATTAATTTTTATTTTAATTTCACATGTCAGCTCAGCAGCCACAGCCAGCTCTCTCAATTTTGTATTTAACCATTTTTCAAATTACAAATAACGCATTCATTGTAATTTGTAGGAATTGTCTTTCTTAGCACAGCTGTAGGAGTACTGTGCATGTTTTGCTTCATGAACAGTATTTGTTTGGGATTAATTGAATTTCCATCCATCAAAATATCTCAAAAGTTACTTTAAGAAAATGATATTTCATCATGAAATTAGTCGAAGGAATTGAAGAAAATTAAATTTAATTAAATTACAAGCTTGGTCTCCACCAACTTTAACTTTATGTTTAATAAAAGTATCTAAAAATTTTGTAAATTTTTAATTTCATATTTAATAGATTTTTTAATTATGTATCTAATAAATCTATGATATATTTTCTAATATTCAGGAAGTTATTAAATATAAAATTAAATTGTTGTATACCTTAAACTTTCAATTTTAAATCTAATAGGATTATCTATTTTAGAATCCATCAATATTCTATTAAACAAAAAAATTGAAAGTTGACAAATCTATTATATACTTTTTAAACTTTTAAAATTTATTATCGTTCTAGCTAAATATTTAGGGTCTATTTAGAGTATATGTCATAATAACGTGTGTTATGGAATAGTCTACGCCCCAAACACGAACTATTATAACCTTATACTATACTACTCTACATTTAGAATAATATTATATTATTTCATAAATTATAATAACTCACATACTATTATAATTCACTCAATGTCTTAAACAACTTTTAGATACTAAATTTATAATTTAACCATTACATTAACTTAATGGAATTATAACAAAATTCGAAATTATGGGACTAAATGGTGGACAGCTTGATGTCGAAACCACACTTCATAAGCTTTCCCTTTTCACACCACGAATGACCATTTTCTTTTTATTTTATAACACTCCACTTCCTAAGAAAATCGTTAAATTCCAATTGTTGGTGATGTGAAAACATAAGGAACAAAATGATAATAATAATAATAACAATAATAATGAATAAAGGCATATGTGATGACTGATGACGTGCGGTCTTGCATATATGTATATATTATTATTTACCCATTGCCACGTGTGATGTAATAAGATACTATAGCTTTTCACTTTTCCACGTAATGTATTATAATTCTTTATTTCGTCTTGCTTTCGAAATTATATATATATCTTGTCTTGCTGTTGCTTTCCCAGTTTCTACTGCTTCTTTTTGTTTCTTTCAGCTCAAATGTCGCGTTAGATGAAGAGTGGTAG

mRNA sequence

ATGCAATTCTCAAGGAAATTCAAAACCAGGCAAAAAAGCAAAGCAGTGATCCAGAGAAATGAAGCAAGAACGAAGCGTGTTATGGTGCAAGAGAAGTGGCAGTTAATGAAGGAAGGAGAAGGACAAAAAGGAGAGACAGAAAAAGGAAGAATACGGAAACAATTCAAAACACCATGCGAGAGAGAGAATAGATGGAGACGAGGACCAATGGAGAAAAGTGAAACCCTAGAGCGGGACCGGCGGCGATGGGCGGCGACCGGCCAATTGTCGGAGGAAGGGAGGGAAGTGGGGAAGACGGAGGTTGAAAAATATAAAGGGGGCTCAAATGTCGCGTTAGATGAAGAGTGGTAG

Coding sequence (CDS)

ATGCAATTCTCAAGGAAATTCAAAACCAGGCAAAAAAGCAAAGCAGTGATCCAGAGAAATGAAGCAAGAACGAAGCGTGTTATGGTGCAAGAGAAGTGGCAGTTAATGAAGGAAGGAGAAGGACAAAAAGGAGAGACAGAAAAAGGAAGAATACGGAAACAATTCAAAACACCATGCGAGAGAGAGAATAGATGGAGACGAGGACCAATGGAGAAAAGTGAAACCCTAGAGCGGGACCGGCGGCGATGGGCGGCGACCGGCCAATTGTCGGAGGAAGGGAGGGAAGTGGGGAAGACGGAGGTTGAAAAATATAAAGGGGGCTCAAATGTCGCGTTAGATGAAGAGTGGTAG

Protein sequence

MQFSRKFKTRQKSKAVIQRNEARTKRVMVQEKWQLMKEGEGQKGETEKGRIRKQFKTPCERENRWRRGPMEKSETLERDRRRWAATGQLSEEGREVGKTEVEKYKGGSNVALDEEW
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0020108.1Tan0020108.1mRNA