Tan0020099 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAATTCAACCCTTTTGATCACAAAAACCCTCTCAAATCCCTCCCTCAAGAACTCAGCAATAACTCGAGCCCCTTCGCCGCCTCGGTCGGTACACCGGGAGGCTCGTTCATGATCGGAGCTAGAAGTAGCATCTCTTCCTCTTTCTCGAGTCTTCAGCTTAGTTCCACCACTTCTTCGCGCTTCAGCTGCCTTCACGACAGCAAGAATAGTTGTCTTCAGGTAAGGGCGAAGCGGAAAAGGAAGGAGTAA ATGGCTGAATTCAACCCTTTTGATCACAAAAACCCTCTCAAATCCCTCCCTCAAGAACTCAGCAATAACTCGAGCCCCTTCGCCGCCTCGGTCGGTACACCGGGAGGCTCGTTCATGATCGGAGCTAGAAGTAGCATCTCTTCCTCTTTCTCGAGTCTTCAGCTTAGTTCCACCACTTCTTCGCGCTTCAGCTGCCTTCACGACAGCAAGAATAGTTGTCTTCAGGTAAGGGCGAAGCGGAAAAGGAAGGAGTAA ATGGCTGAATTCAACCCTTTTGATCACAAAAACCCTCTCAAATCCCTCCCTCAAGAACTCAGCAATAACTCGAGCCCCTTCGCCGCCTCGGTCGGTACACCGGGAGGCTCGTTCATGATCGGAGCTAGAAGTAGCATCTCTTCCTCTTTCTCGAGTCTTCAGCTTAGTTCCACCACTTCTTCGCGCTTCAGCTGCCTTCACGACAGCAAGAATAGTTGTCTTCAGGTAAGGGCGAAGCGGAAAAGGAAGGAGTAA MAEFNPFDHKNPLKSLPQELSNNSSPFAASVGTPGGSFMIGARSSISSSFSSLQLSSTTSSRFSCLHDSKNSCLQVRAKRKRKE Homology
BLAST of Tan0020099 vs. NCBI nr
Match: XP_038876751.1 (zinc finger protein GAI-ASSOCIATED FACTOR 1-like [Benincasa hispida]) HSP 1 Score: 96.3 bits (238), Expect = 1.4e-16 Identity = 55/74 (74.32%), Postives = 62/74 (83.78%), Query Frame = 0
BLAST of Tan0020099 vs. NCBI nr
Match: KAE8646332.1 (hypothetical protein Csa_016679, partial [Cucumis sativus]) HSP 1 Score: 93.6 bits (231), Expect = 8.8e-16 Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of Tan0020099 vs. NCBI nr
Match: XP_004136179.1 (zinc finger protein GAI-ASSOCIATED FACTOR 1 [Cucumis sativus]) HSP 1 Score: 93.6 bits (231), Expect = 8.8e-16 Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of Tan0020099 vs. NCBI nr
Match: XP_022153576.1 (protein indeterminate-domain 2-like [Momordica charantia]) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13 Identity = 53/78 (67.95%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Tan0020099 vs. NCBI nr
Match: KAA0068031.1 (protein indeterminate-domain 2-like [Cucumis melo var. makuwa] >TYK18097.1 protein indeterminate-domain 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-12 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Tan0020099 vs. ExPASy TrEMBL
Match: A0A0A0K5A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G395230 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18 Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of Tan0020099 vs. ExPASy TrEMBL
Match: A0A6J1DL17 (protein indeterminate-domain 2-like OS=Momordica charantia OX=3673 GN=LOC111021044 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.8e-14 Identity = 53/78 (67.95%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Tan0020099 vs. ExPASy TrEMBL
Match: A0A5D3D2F3 (Protein indeterminate-domain 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00180 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.7e-13 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Tan0020099 vs. ExPASy TrEMBL
Match: A0A1S3BT63 (protein indeterminate-domain 2-like OS=Cucumis melo OX=3656 GN=LOC103492898 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.7e-13 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Tan0020099 vs. ExPASy TrEMBL
Match: A0A067HHA2 (C2H2-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010444mg PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.2e-06 Identity = 44/86 (51.16%), Postives = 50/86 (58.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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