Tan0020071 (gene) Snake gourd v1

Overview


Name	Tan0020071
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	GTP-binding protein YPTM2-like isoform X2
Location	LG01: 4175907 .. 4177824 (-)
RNA-Seq Expression	Tan0020071
Synteny	Tan0020071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACCGATCGGCGAGCTGGAACCGATTCTCCGACGAATACTACTCGCACTCGTCCCCGTCGCCGGCGCCGTCCTCGAAGCCAGGGCAGGCGTTGCGATTGTCGTCGTCATTTGACGGCAATGAGCTGCCGACGAATGATCCGGTGGAGGAGATGGTGAAGCGAGAGAAAGCGCGAGTCAAGTTCGCTGAAACTGCTGTTCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGGTAAGAGAGGATCGTAACGTAACGCAGGTAGATTTCGAATTCTGCTTCTTCGATTCTTTCTTTCTTTCCCGCCATTTGATTTTCCCGGAAAATGAAAGGAAATTTCCCTGTTCTGTAACTGAAACTTATCCACTAATCCAACAAATTAATCCCTTTTGAGTTCCGAGAATAAAGAAATAAAGAATGGTTAAAATGAAATTACACCGACTCCAAATTTTAAAAAGTATATTATTCATGTGTAAATTTGTAATATGTTACTGAAGAATTGATCTAAAAAGGAAAAAAAAAAAGTGATGGCAAAATTCACGTGAGAAATTCTTGATCCTTATAATTTTAAAATTTTAAATTAATTTCTATAGTTCATGAACTCTAAAAAATAGTCCTTGCCTTAGAGACTATTTATGAGAATTTTATCAAACTATAAAGATTATTTATAAGTTTTATCAAATCAAAATGATGAAATGCCGACTTTTTAAAAACCATAGAACTAACAAATTTTTAATTTAACTAAAAAATACTGAAATTAGGTTAAATTATAAATTTATTTCCTGGATTTTTAGGGTTGTGTTCATTTGGACTGAACTTTCAAAATTACAAATTTAATTCCGAACTTTCGAATATTTTAAAAGTCATAGAACAAACTTAAAATTTTAGGATTTCATTAAACATAAAAATCAAGTTTATATCGGATAGATCAATTAAATTTTTTTTAAAAAAAATGAATGGTACGGGACATATTAGACACAAAATTAAAACTTTAGGGACTTATTAATGCTTTCGAAATTTCAAATATCAAATAGATACAAACTTCAAATTTGAGATACTAAATTTATAATTTAACTGAAGATTAATTATTATTATTATTATTATTTTACAAGGGTAAAAAATTTATTGTAAAAAATTTAATTTTATGTCCAATAAATTTCTAAACAAATTTTAAATTTTATGTTTAGTTGATATGTGAAGTCAGGATTGTAACCATTTTATTTTAGATTTTTTGAAATTTAAGGTTATAAAAATTGTTTCAAGTTCCACCCATATGTTTTTTTAGAAATATTTTCAAAATTTAAGCAAAATTTTAAAAACTAACAAAGAAGGTTATAGTTTTCCCACACTTGTTTAAGGAAAAAAAAAACCTTGGAACTCAATATATTTTTGAGAAAGGTGGAGAATACATTTAGAAAATTGTGAGCAACAAATATTCTTTAAACAACATAAAACAAACAAAAAAATGGTTTAGATTTGAGGTCTCAATGCAACTTATACGCAAAAATTGGAAGTCCAAGTTTTAAACACTTCATAAAATTCGATGTTGTACTGATACAACTTTAAAATCTTATGGAAACAGATATATAAATTAATGAAAGAAATCATTTAATATTTCATTTATATTGATTGGGCCAAACTATGTTATAGTTTGTTTTTCTTATAGTTATTGAAATTGTTTTTAAGCGAAATTCATCTGCAGAAATAGAAGTGGGGATGAGAGGGGAAACAATGGCAGCGAGAATAGAGGGATTAACAATCGAAGGAGAAATTGAGAGTGAATTTGATGGTACCCAAAAGGAAGCTCTCCCAATTTTGGACACGACTTCCTCCGGCTCTTCAAAACAACTCCACGATACATCTACGTTGAAAATTAAAAGGCTCGGGTGA

mRNA sequence

ATGTACCGATCGGCGAGCTGGAACCGATTCTCCGACGAATACTACTCGCACTCGTCCCCGTCGCCGGCGCCGTCCTCGAAGCCAGGGCAGGCGTTGCGATTGTCGTCGTCATTTGACGGCAATGAGCTGCCGACGAATGATCCGGTGGAGGAGATGGTGAAGCGAGAGAAAGCGCGAGTCAAGTTCGCTGAAACTGCTGTTCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGAAATAGAAGTGGGGATGAGAGGGGAAACAATGGCAGCGAGAATAGAGGGATTAACAATCGAAGGAGAAATTGAGAGTGAATTTGATGGTACCCAAAAGGAAGCTCTCCCAATTTTGGACACGACTTCCTCCGGCTCTTCAAAACAACTCCACGATACATCTACGTTGAAAATTAAAAGGCTCGGGTGA

Coding sequence (CDS)

ATGTACCGATCGGCGAGCTGGAACCGATTCTCCGACGAATACTACTCGCACTCGTCCCCGTCGCCGGCGCCGTCCTCGAAGCCAGGGCAGGCGTTGCGATTGTCGTCGTCATTTGACGGCAATGAGCTGCCGACGAATGATCCGGTGGAGGAGATGGTGAAGCGAGAGAAAGCGCGAGTCAAGTTCGCTGAAACTGCTGTTCATGTGATTCCTCTCGTTTTGCTTCTCTGCGCCATTGTTCTCTGGTTCTTCTCCAATCCAGAAATAGAAGTGGGGATGAGAGGGGAAACAATGGCAGCGAGAATAGAGGGATTAACAATCGAAGGAGAAATTGAGAGTGAATTTGATGGTACCCAAAAGGAAGCTCTCCCAATTTTGGACACGACTTCCTCCGGCTCTTCAAAACAACTCCACGATACATCTACGTTGAAAATTAAAAGGCTCGGGTGA

Protein sequence

MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARVKFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQKEALPILDTTSSGSSKQLHDTSTLKIKRLG

Homology

[Close]

BLAST of Tan0020071 vs. NCBI nr
Match: XP_022986879.1 (uncharacterized protein LOC111484483 [Cucurbita maxima])

HSP 1 Score: 208.0 bits (528), Expect = 5.7e-50
Identity = 112/148 (75.68%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA SS P QALRL+SSFDGNE PT+ P EEMVKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPSPALSSTPSQALRLTSSFDGNEQPTSYPAEEMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFA TAVHVIPLVL+LCAI+LWFFSNPEI+VGMR + MAARIEGL +EGEIE EF G Q 
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRLDPMAARIEGLNVEGEIEREFGGAQN 120

Query: 121 EALPILDTTSSGSSKQLHDTSTLKIKRL 149
           EALPILD+T           STLKIKRL
Sbjct: 121 EALPILDST----------PSTLKIKRL 138

[Close]

BLAST of Tan0020071 vs. NCBI nr
Match: XP_022140815.1 (uncharacterized protein LOC111011394 isoform X1 [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 5.7e-50
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           MYRS SWNRFSDEYYS SSP+   SSKP QAL LSSSF  NELPTNDPV  MVKREKARV
Sbjct: 1   MYRSVSWNRFSDEYYSRSSPALVLSSKPDQALGLSSSFGANELPTNDPVAVMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFAETAVHVIPLVLLLCAIVLWFFSNPEI+VGMRGET+AARIEGLTIEGE+ESE      
Sbjct: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIDVGMRGETIAARIEGLTIEGELESE------ 120

Query: 121 EALPILDTTSSGSSKQLHD-TSTLKIKR 148
             +PILDT SS  S QL D +S LKIKR
Sbjct: 121 --IPILDTASSHHSNQLDDPSSILKIKR 140

[Close]

BLAST of Tan0020071 vs. NCBI nr
Match: KAG6600205.1 (hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 109/148 (73.65%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA SS PGQALRL  SFDGNE PT+ P +E+VKREKARV
Sbjct: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 213

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFA TAVHVIPLVL+LCAI+LWFFSNPEI+ GMR + MAARIEGL +EGEIE EF G Q 
Sbjct: 214 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQN 273

Query: 121 EALPILDTTSSGSSKQLHDTSTLKIKRL 149
           EALPILD+T           STLKIKRL
Sbjct: 274 EALPILDST----------PSTLKIKRL 289

[Close]

BLAST of Tan0020071 vs. NCBI nr
Match: KAG7030866.1 (hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 109/148 (73.65%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA SS PGQALRL  SFDGNE PT+ P +E+VKREKARV
Sbjct: 70  MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 129

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFA TAVHVIPLVL+LCAI+LWFFSNPEI+ GMR + MAARIEGL +EGEIE EF G Q 
Sbjct: 130 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQN 189

Query: 121 EALPILDTTSSGSSKQLHDTSTLKIKRL 149
           EALPILD+T           STLKIKRL
Sbjct: 190 EALPILDST----------PSTLKIKRL 205

[Close]

BLAST of Tan0020071 vs. NCBI nr
Match: XP_022942780.1 (uncharacterized protein LOC111447711 [Cucurbita moschata])

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 108/148 (72.97%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           M+RS SWNRFSDEYYS SSP PA SS PGQALRL  SFDGNE PT+ P +E+VKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPLPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFA TAVHVIPLVL+LCAI+LWFFSNPEI+VGMR + MAA IEGL +EGEIE EF G Q 
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRWDPMAATIEGLNVEGEIEREFGGAQN 120

Query: 121 EALPILDTTSSGSSKQLHDTSTLKIKRL 149
           EALPILD+T           STLKIKRL
Sbjct: 121 EALPILDST----------PSTLKIKRL 136

[Close]

BLAST of Tan0020071 vs. ExPASy TrEMBL
Match: A0A6J1JHB4 (uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.7e-50
Identity = 112/148 (75.68%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           M+RS SWNRFSDEYYS SSPSPA SS P QALRL+SSFDGNE PT+ P EEMVKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPSPALSSTPSQALRLTSSFDGNEQPTSYPAEEMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFA TAVHVIPLVL+LCAI+LWFFSNPEI+VGMR + MAARIEGL +EGEIE EF G Q 
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRLDPMAARIEGLNVEGEIEREFGGAQN 120

Query: 121 EALPILDTTSSGSSKQLHDTSTLKIKRL 149
           EALPILD+T           STLKIKRL
Sbjct: 121 EALPILDST----------PSTLKIKRL 138

[Close]

BLAST of Tan0020071 vs. ExPASy TrEMBL
Match: A0A6J1CG79 (uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011394 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.7e-50
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           MYRS SWNRFSDEYYS SSP+   SSKP QAL LSSSF  NELPTNDPV  MVKREKARV
Sbjct: 1   MYRSVSWNRFSDEYYSRSSPALVLSSKPDQALGLSSSFGANELPTNDPVAVMVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFAETAVHVIPLVLLLCAIVLWFFSNPEI+VGMRGET+AARIEGLTIEGE+ESE      
Sbjct: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIDVGMRGETIAARIEGLTIEGELESE------ 120

Query: 121 EALPILDTTSSGSSKQLHD-TSTLKIKR 148
             +PILDT SS  S QL D +S LKIKR
Sbjct: 121 --IPILDTASSHHSNQLDDPSSILKIKR 140

[Close]

BLAST of Tan0020071 vs. ExPASy TrEMBL
Match: A0A6J1FWX5 (uncharacterized protein LOC111447711 OS=Cucurbita moschata OX=3662 GN=LOC111447711 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.8e-47
Identity = 108/148 (72.97%), Postives = 118/148 (79.73%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPVEEMVKREKARV 60
           M+RS SWNRFSDEYYS SSP PA SS PGQALRL  SFDGNE PT+ P +E+VKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPLPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 60

Query: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQK 120
           KFA TAVHVIPLVL+LCAI+LWFFSNPEI+VGMR + MAA IEGL +EGEIE EF G Q 
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRWDPMAATIEGLNVEGEIEREFGGAQN 120

Query: 121 EALPILDTTSSGSSKQLHDTSTLKIKRL 149
           EALPILD+T           STLKIKRL
Sbjct: 121 EALPILDST----------PSTLKIKRL 136

[Close]

BLAST of Tan0020071 vs. ExPASy TrEMBL
Match: A0A1S4E0H1 (uncharacterized protein LOC103494452 OS=Cucumis melo OX=3656 GN=LOC103494452 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.2e-42
Identity = 103/146 (70.55%), Postives = 110/146 (75.34%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFD--GNELPTNDPVEEMVKREKA 60
           MYRSASWNRFSDEYYSHS    APSSKPGQ+LRLSSSFD   NELP NDPV EMVKREKA
Sbjct: 1   MYRSASWNRFSDEYYSHS----APSSKPGQSLRLSSSFDQGNNELPMNDPVTEMVKREKA 60

Query: 61  RVKFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGT 120
           RVKFAE AVHVIP VLL+C IVLWFFSNPE++V MRG TM + I GLT+EGEIES    T
Sbjct: 61  RVKFAENAVHVIPFVLLICGIVLWFFSNPEVDVEMRGGTMRSTIVGLTLEGEIES----T 120

Query: 121 QKEALPILDTTSSGSSKQLHDTSTLK 145
           QKE  P         S + H TST K
Sbjct: 121 QKEETPPTLNRPLSHSSEPHHTSTSK 138

[Close]

BLAST of Tan0020071 vs. ExPASy TrEMBL
Match: A0A0A0KZ80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025085 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.1e-42
Identity = 103/142 (72.54%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFD--GNELPTNDPVEEMVKREKA 60
           MYRS SWNRFSDEYYSHS    APSSKPGQ+LRLSSSFD   NELPTNDPV EMVKREKA
Sbjct: 1   MYRSVSWNRFSDEYYSHS----APSSKPGQSLRLSSSFDHGNNELPTNDPVSEMVKREKA 60

Query: 61  RVKFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGT 120
           RVKFAETAVHVIP VLL+CAIVLWFFSNP++E  MRG T    I  LT+EGE ES    T
Sbjct: 61  RVKFAETAVHVIPFVLLICAIVLWFFSNPDVE--MRGATTTGIIRSLTLEGEFES----T 120

Query: 121 QKEALPILDTTSSGSSKQLHDT 141
           Q EALP  D   S +S+ LHDT
Sbjct: 121 QTEALPTFDGPFSDASR-LHDT 131

[Close]

BLAST of Tan0020071 vs. TAIR 10
Match: AT5G61630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-31
Identity = 70/123 (56.91%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSS---SFDGNELPT-NDPVEEMVKRE 60
           MYRSASWNR  ++Y          SS P + L + S     D NELP+ N+P EEMVK+E
Sbjct: 1   MYRSASWNRVPEDY----------SSAPPKGLWMGSVIGPLDENELPSYNNPPEEMVKKE 60

Query: 61  KARVKFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFD 120
           K+R KFAE A+H+IP VLL CA+VLW FSNP+++VGMR E++AA+IEGLTIEG+I+++ D
Sbjct: 61  KSRAKFAENAIHIIPFVLLACALVLWLFSNPDVDVGMREESIAAKIEGLTIEGDIDNDSD 113

[Close]

BLAST of Tan0020071 vs. TAIR 10
Match: AT5G07490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61630.1); Has 50 Blast hits to 50 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.0e-28
Identity = 66/120 (55.00%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNELPTNDPV-EEMVKREKAR 60
           MYRSASWNR +++Y   S P  AP         L    D +E    DP  +EM K+EK+R
Sbjct: 1   MYRSASWNRVTEDY---SVPWSAPKG-------LWKGLDEDEPAPYDPTGQEMTKKEKSR 60

Query: 61  VKFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARIEGLTIEGEIESEFDGTQ 120
            KFAE AVH+IP VLL CA+VLWFFSNP+++VG++G+++AARIEGLTIEG+I+++ DGTQ
Sbjct: 61  TKFAENAVHIIPFVLLACALVLWFFSNPDVDVGVKGDSIAARIEGLTIEGDIDNDSDGTQ 110

[Close]

BLAST of Tan0020071 vs. TAIR 10
Match: AT2G35658.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-12
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 1   MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNE----LPTNDPVEEMVKRE 60
           M RSAS +  SD+  S +SPSP+PS       R+ +S D ++    LP  DP     K+ 
Sbjct: 1   MRRSASASIVSDQ-LSANSPSPSPSPP-----RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61  KARVKFAETAVHVIPLVLLLCAIVLWFFSNPEIEVGMRGETMAARI 103
           K+R + AE A+H IP+VL+LCA++LW FSNP  ++   G+  +  +
Sbjct: 61  KSRFRSAENAIHFIPIVLILCAVILWMFSNPGNQIQFLGDKSSVHV 100

[Close]

BLAST of Tan0020071 vs. TAIR 10
Match: AT2G35658.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 1  MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNE----LPTNDPVEEMVKRE 60
          M RSAS +  SD+  S +SPSP+PS       R+ +S D ++    LP  DP     K+ 
Sbjct: 1  MRRSASASIVSDQ-LSANSPSPSPSPP-----RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61 KARVKFAETAVHVIPLVLLLCAIVLWFFSNPEIEV 92
          K+R + AE A+H IP+VL+LCA++LW FSNP  ++
Sbjct: 61 KSRFRSAENAIHFIPIVLILCAVILWMFSNPVAKI 89

[Close]

BLAST of Tan0020071 vs. TAIR 10
Match: AT2G35658.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MYRSASWNRFSDEYYSHSSPSPAPSSKPGQALRLSSSFDGNE----LPTNDPVEEMVKRE 60
          M RSAS +  SD+  S +SPSP+PS       R+ +S D ++    LP  DP     K+ 
Sbjct: 1  MRRSASASIVSDQ-LSANSPSPSPSPP-----RIKTSADSDDSHLLLPRYDPNSHPGKKN 60

Query: 61 KARVKFAETAVHVIPLVLLLCAIVLWFFSNP 88
          K+R + AE A+H IP+VL+LCA++LW FSNP
Sbjct: 61 KSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

The following BLAST results are available for this feature:

BLAST of Tan0020071 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986879.1	5.7e-50	75.68	uncharacterized protein LOC111484483 [Cucurbita maxima]	[more]
XP_022140815.1	5.7e-50	78.38	uncharacterized protein LOC111011394 isoform X1 [Momordica charantia]	[more]
KAG6600205.1	1.2e-47	73.65	hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030866.1	1.2e-47	73.65	hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022942780.1	1.0e-46	72.97	uncharacterized protein LOC111447711 [Cucurbita moschata]	[more]

BLAST of Tan0020071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHB4	2.7e-50	75.68	uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483...	[more]
A0A6J1CG79	2.7e-50	78.38	uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1FWX5	4.8e-47	72.97	uncharacterized protein LOC111447711 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A1S4E0H1	1.2e-42	70.55	uncharacterized protein LOC103494452 OS=Cucumis melo OX=3656 GN=LOC103494452 PE=...	[more]
A0A0A0KZ80	6.1e-42	72.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025085 PE=4 SV=1	[more]

BLAST of Tan0020071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61630.1	2.2e-31	56.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G07490.1	1.0e-28	55.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G35658.2	3.8e-12	39.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35658.1	2.5e-11	43.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35658.3	3.2e-11	45.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR34189	TRANSMEMBRANE PROTEIN	coord: 1..143
None	No IPR available	PANTHER	PTHR34189:SF4	TRANSMEMBRANE PROTEIN	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020071.1	Tan0020071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane