Tan0020021 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACAAGTGGATTTTCATTCGTTACGAAGGTGATTGGCAGGAGGACTCATGGACTTGTACCGGAGGACAAATGATCGGTATCGTGGTGCCGATAACGATTATGCTCGAAGAATGTAGGTCTGAGGTTTACGATGTTACATCAATTAATGAGTACGAGTATGAAATTGAAATGAGAGTTAAATTCAATACAGAATATCCCCCACCACCAATGTACATAAGTAACGATCAAGATGTTCGATTTTTTATGAACTATCTATACGTGTCAAGAGCTCAAGTATGGGTAACAAATGTATAAAATAAGTGAACAAACGACGGGTTGGAGAAGGATGATGATTCTGGTCAAGACCCAGAATACGAACCTAGGCAGGGCGATGAATGTGATTCAGATGAAGGAGTAGAAGAGGGTGTAATGGTAATAGAAAGCGATGAGTATGTTGAACATGATGATGATGATGAAGAAGAAGAAGAAGAAGAAGAATATGAATCAAAAGAGGGAGAAGATGGAGACGATGTCAAAGCTGGGCTTGATTTTGGCCATGTACAAGATACATAATGGTTTAAGACGTCAGATATTTTAAATCTATCACAGGCGACGCCATGTGGTTTAGGTCCTACCCCTGAGAAAGAAGTCCAACCTTTTTTAGGTGGTAACTTGTACGAGTGGGGTGATTATTCAGGGTACGCTATGAATGTTGATGATGCCGAGACCCGTTCACATTTGCTGCAAGATTCAGTACCCTATGGTCGAAGAGGCTCATGCCCTGAAGTTAGTTAG ATGGAGAACAAGTGGATTTTCATTCGTTACGAAGGTGATTGGCAGGAGGACTCATGGACTTGTACCGGAGGACAAATGATCGGTATCGTGGTGCCGATAACGATTATGCTCGAAGAATGTAGGTCTGAGGTTTACGATGTTACATCAATTAATGAGTACGAGTATGAAATTGAAATGAGAGTTAAATTCAATACAGAATATCCCCCACCACCAATGTACATAAGTAACGATCAAGATGTTCGATTTTTTATGAACTATCTATACGTGTCAAGAGCTCAAGATGATGATTCTGGTCAAGACCCAGAATACGAACCTAGGCAGGGCGATGAATGTGATTCAGATGAAGGAGTAGAAGAGGGTGTAATGGTAATAGAAAGCGATGAGTATGTTGAACATGATGATGATGATGAAGAAGAAGAAGAAGAAGAAGAATATGAATCAAAAGAGGGAGAAGATGGAGACGATGTCAAAGCTGGGCTTGATTTTGGCCATGCGACGCCATGTGGTTTAGGTCCTACCCCTGAGAAAGAAGTCCAACCTTTTTTAGGTGGTAACTTGTACGAGTGGGGTGATTATTCAGGGTACGCTATGAATGTTGATGATGCCGAGACCCGTTCACATTTGCTGCAAGATTCAGTACCCTATGGTCGAAGAGGCTCATGCCCTGAAGTTAGTTAG ATGGAGAACAAGTGGATTTTCATTCGTTACGAAGGTGATTGGCAGGAGGACTCATGGACTTGTACCGGAGGACAAATGATCGGTATCGTGGTGCCGATAACGATTATGCTCGAAGAATGTAGGTCTGAGGTTTACGATGTTACATCAATTAATGAGTACGAGTATGAAATTGAAATGAGAGTTAAATTCAATACAGAATATCCCCCACCACCAATGTACATAAGTAACGATCAAGATGTTCGATTTTTTATGAACTATCTATACGTGTCAAGAGCTCAAGATGATGATTCTGGTCAAGACCCAGAATACGAACCTAGGCAGGGCGATGAATGTGATTCAGATGAAGGAGTAGAAGAGGGTGTAATGGTAATAGAAAGCGATGAGTATGTTGAACATGATGATGATGATGAAGAAGAAGAAGAAGAAGAAGAATATGAATCAAAAGAGGGAGAAGATGGAGACGATGTCAAAGCTGGGCTTGATTTTGGCCATGCGACGCCATGTGGTTTAGGTCCTACCCCTGAGAAAGAAGTCCAACCTTTTTTAGGTGGTAACTTGTACGAGTGGGGTGATTATTCAGGGTACGCTATGAATGTTGATGATGCCGAGACCCGTTCACATTTGCTGCAAGATTCAGTACCCTATGGTCGAAGAGGCTCATGCCCTGAAGTTAGTTAG MENKWIFIRYEGDWQEDSWTCTGGQMIGIVVPITIMLEECRSEVYDVTSINEYEYEIEMRVKFNTEYPPPPMYISNDQDVRFFMNYLYVSRAQDDDSGQDPEYEPRQGDECDSDEGVEEGVMVIESDEYVEHDDDDEEEEEEEEYESKEGEDGDDVKAGLDFGHATPCGLGPTPEKEVQPFLGGNLYEWGDYSGYAMNVDDAETRSHLLQDSVPYGRRGSCPEVS Homology
BLAST of Tan0020021 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-08 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of Tan0020021 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia]) HSP 1 Score: 68.6 bits (166), Expect = 8.1e-08 Identity = 26/88 (29.55%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Tan0020021 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-07 Identity = 59/204 (28.92%), Postives = 94/204 (46.08%), Query Frame = 0
BLAST of Tan0020021 vs. NCBI nr
Match: KAA0051607.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 5.2e-07 Identity = 30/86 (34.88%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Tan0020021 vs. NCBI nr
Match: XP_038891939.1 (uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]) HSP 1 Score: 65.5 bits (158), Expect = 6.8e-07 Identity = 44/142 (30.99%), Postives = 75/142 (52.82%), Query Frame = 0
BLAST of Tan0020021 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-08 Identity = 26/88 (29.55%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Tan0020021 vs. ExPASy TrEMBL
Match: A0A5A7UB55 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001530 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07 Identity = 30/86 (34.88%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Tan0020021 vs. ExPASy TrEMBL
Match: A0A6J5W2L5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS3856 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of Tan0020021 vs. ExPASy TrEMBL
Match: A0A5A7U2Y3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00460 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06 Identity = 29/86 (33.72%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Tan0020021 vs. ExPASy TrEMBL
Match: A0A5D3CZS8 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00720 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.8e-06 Identity = 29/86 (33.72%), Postives = 52/86 (60.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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