
Tan0020010 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTTCTCCTTAAAAATTCTGTTTCAGGTTACCCATTTAATATTTATTATAAAAAAATGAAAATAATTATTAAAAAAAAATCCATAAATTTTCCTACTTGTTTCACTCTCCGTCTTTTTCTGCTCTTTGATTCTCTCTAAATTTTCGGGTTCTTCTTTTGCTGTAGCTTTTGTGGGTTTAATAGAAATGGCAACTGTTCAGCCACTTACAAATGGAGTTTCTGAGATTACTCAAGAGGTTGGGTTTTTTTTTTTCCCCATTTTCCATATTTAATTTCTTCTTCTTTGTCTTTTGCATGTGGGTTTGTATTTTGATCCTTTTTTTTTCATTGATTTTATGATTATTTTTTCAGCTGTTTTAGAGCTATGCAATTGACAATTTCCTGTTCTTTCGAGTTATGCCAGATTGATATTTAGAAATATTATGAGAAATTAATGATACTTGATTTTGATTCATGTGAGTGCTGAGGTTTATTCGAAACATTTATTTTTATATTTTCTTAGCTTAATTTGAGCTGAATTCCAAAAATGGTAGTTTGTCCTATTTTTTGGGGGAATTTTATTTATTTTGCTACTGTTGGTACTTTGTAGATCTTGAACAGTGTGTCGAGTTCTAGCTAAAAAGATAATGCTCATATTTCATAAATTAGATCTAAACCATCCAGATTCTTTTGCATGATGTTTAATCAGTAAATATGGCAAATATATATGATAATCTTGCCTAAGCTCTTGTTTACAATTCATAACAATTTAAACTGCGATAGGACCCGAATGGATGGATGTACTATACACTGACTCATGGGCTGACTCTCGTCCCCGAGCAGGTAGCGAAGTCAGATGCCATGGGATGACTCACTTAGGCCCCGTGTGGCAGCATGTTCATTAAGCCAATTCACGTAGCGAGTTCTCGAGTTTTTATAATTAAAAATGAAAAATAAGGAGTTGTTTGGGGCGCTGAGTGAGTTATAATAATCTATGGGTTATGAATATAATAATATGTGGAGTTATATAATCTATATTTTAGATGTAGAGTTATTTAGTCTAGATTTTAATAGTCTGTGTTTATGGTGCAGTTTTATTCACAAATTAATATAACACAGGTTATTAGAACATACATGCCCAAAACATTTACATGAAGAACTATCAAATGCTTTAATTTGAGATATCATTTATATCATTTTTCTGTGATTTTTTCCTTTGCGAGTTCTTTCTCTTAAGATATGTATTAAACTGTCTAGATAGTCGATGAATCTAATTTGAATTTGAATTTGTTTGAACAATTGTTATTATTTGCAGGAAGACGACCAGATTGTGAAATCTGTAAATGAACAGACTTCAGTTGCTGGACATAGTAGTAGACGTCCTGATATTTCACTTCAAATACCCCCGAGATCGTCGGGTTTTGGTAAAAGCCGTAGTGGGAAAGGTTTACTGCAATCTCAAGCTTCCGGTAAGGGTGGTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGAAAAGGCATTGCTGCTGAAGGTGAGAGAAGTTCACTTCTAAGTTTGGACCCGAAGACAACTGCTGAAAGTCCGATAATGGCTGCTTTCGCTTCACATTTTTCGTGGCAAAAATCCAACTCTCTCCCAGTTACTCCAGCATCAAACTTGTCCCCCTCGGTTCCCATCCCCGCCACGACAACTGCCACCAATGAAAGGCCAATCCCACATGTGAGTTATCTCGTGATACAAACTTCATTTTTTAAAGTTTCATCTTACAAAAACTGGCTAGAATTTTAGTACTTACACTGGAAAAAGGTTTATTATAATGTTGCTCGCTTCAGATTCGTAATTTGGTCTTTCGTTTTATCTCTTGCAGAAAGAAGCAGCCCGGGCAGTTTCGAGATCTCTATCCGTGCCCAGTAGAAGTATCATTATAGTACGATCGACATCTTTCGCTACCCCGAAAGAAAATTCTGTGGCCAGTACCAGTTCTGGTATAAGTCCACATACCCTACTGATAGTGATTAATCAGCTAGTTTAGATGCAGCCTTCTTTTATTACTAGTTTAAATATTGCTTTATTCTATGCTCACCCTTCACATCCTATAGAAGCCGTGGCATGATTTTATTACAGGTTGCAATTTTATATATAATATATATTAGGTCCTTAAAATTGTCAATAATTATGAACCTTGCATGTCTTTGTTTAGTTGATATAGTATTGGTCATGTGAGTGATTTTCATACTGAATTTTTTTACTCTTTAAGTATTAACGGTCACTAAACGTGTCATAAAAAGGATGACGCATGAATTTAGAAAAGACATTTTATTTTTTATGAGGTTGTCAGTAGCATTTTTAATCGGTTCATTTTTTTAATGACAACCACTATGAGTTGGCCTGATGAACAATAAGAAATAAACGGCTTAGAGGAAATGAGTTCAAATCATCTTGGCCACCTAATTAGAATTTGATATCTTACAACTATAAGTTATTTTGACAATCAAATGAAGTAGGATCACGCGGTTATCCTGTGAGAACCACGTAAGTTGGATCAGACACTCATGGATATTAAAAATAATATATAATAGTATGGTATGGTTATGTAAAATGGGCAAGTTGTCAATTTTATTGGTCACCATGTTTGTCATAAAATTAAAATATAGGATATATCCAACACAACAAAATGTATTTTAATGTCACATCATCCTTTCAAATCTTAATGTTTATTGACGATAAGGATTTGATTAAAAGAGAAATTAATACGTCGAATGATGAAATTAAAACTTTTAAAAGATCAGGGACGAAATTTAAAAATAACACAAAATTAGGGACAATTATATATCGAGCCTTATGTAAATTATTTCATGTATCAGATCAAAATGGTTCTGCTGCCTTAGAAAATGATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATCTGTCTTGAACCATGCGAAGAAGAAAACACTCTCAAAATGGAATGCAGTTGCAAGGGAGCCCTTAGGCTTTTACATAAAGATTGTGCAATAGAATGGTTTAGCAGAAAAGGAAACAAGAACTGTGAAGTCTGTAGGCAGGAGGTAAAGAATTTACCCGTCACATTACTCCGCATTCCGACCACTGCACAACGGGACGGAGGATCGCTGCATAATCAACTGACTCTCCGTTCGCGGACGATAAGGTATAGAATGGCTGGTCATGATTTGGATTTTGAAACCTTATATAAAGGATTCTGTTATGCCACTAAATAGTTTATGTTTTTGACGATGTTCGAAAATTTCACTCTCGTTCCCCGGTTTTTCGTTTCTCGTACTTAGCTGAAACTGTACTTAACTGCTATATTTGTTGCAGTGCCTGGCAGGACTTTGTGGTGCTTGTTTTAATCAGCACAATATGCTACTTCTTCTTCCTTGAGCAGCTTCTGGTATGTCATTTGCTATGAAGAGGAAATTGTTTGAATTTCTTTCAACTTGAACTTCTTTAGGAATATGTATTCACATGTACTTGGATCCGAATATCGTTCGATCTTGCTTTTGTTCATATCGTCTATAATATTGTGTTTTTGCCTTTTGATTGTTCGTTTTTAGGTTCACGACTTGAGGACTCAAGCGATCATTTACGCTGCGCCTTTTGCATTGGTGTTTGGTCTCATGTCATCGATATTCTCTGTCATTCTCGGTATAGCTTGCGCCGATTTTAAATATTTTCTTGGTTAAAATACTATTTTGGTCTTGTACGTTAAGTTTCATTCCACTTTTATTTTTGTAAAATTTTAAATATTTTCTTGGTTAAAATACCATTTTGGTCTTGTACGTTAGGTTTCATTCTATTTTGAAGTTTATACTTCTAAATGTCAAATTTTAGTCCCAGTATGGTTCTTGTACTTTCACATGTTCAAATATAGTTTTTATATTTTCAATAAAGCTTAACATTGGTCCTTACTATTAGTTTAGTTTATTGTTAACTTTTCTATAAAAAAAAATATATTCTCTTTTAACCTATTTTCTTTAAGTGATTTATGACTCATAATTTGCCTGCTTGCTTAACTTTGCAGCAATCAAGGAGTATATATGGACATATGCAGCTCTAGAGTTTGCACTTGTAGCTATTATTCTTCATCTATTCTATACTTTGGTGAGTAAAATCTTCATGCATTGGACATGGCACAATTTTAGTCTGATTACTGTGAGATCTCTTTATTCACATTGAAAAGTAATCCAATCTCAAAGTGGCTTGTGCCACCCTGTTTGTGAAGGGTTTAAACAAACAGGAATACGAGTGAGTCGATTCTGGCTGCTTTTTATGGCCAAAAAAAAAAACGATGCTAAAACAATTTTTGAAAACCAAACTGACCCGACTAGAATTTTTGTACTCGGGAAATTGAACTAAGACTAATGAGTATATTTTAGACCATCAGAATTGCAGTTTCGAACCCGAAACTGAAGCTGAAAAATTCAAACGCTTTTAGCTCGAAAAAAACCCCAATCTTACCGTTGTGGTTTCCTTTGTAACATCTTTCCCTCAGCTGCCTTTGGACTTCCTTCTTTACTGCATTTTGCATTAGAAACCTCAACTTCCTCACTACATCTCAGTGACAATCTTTTGGCCTTGTTTGCAGCTAAAACTGAAGGTCATATATGCCATATTGCTGTCTGCAATCTTGGGTTTTGGTGTGGCTATGAGCCTGAACTCTATATACATTCATTACTACATGTGGCGAGTTCGAGTCGCTCAAAATCCTAGCCCAGTGTAAGACGATAACCCCGTCTTCTGTATCTTCCTTTCCAACGATAATTCGGTGCAAGATGAGCAAAATGCAGGTAGATCCCATTTTACATGAAAAATTCCAGGTATCTAATGAGTAAATGATCATGATCATAATCAAGATGATACGAGAGTTTTGAGTCGCCTAAACAATCAAAGTTCGCATTGATGATATCAATAGACGAGCTCCAGCTGCAACAGATAATGAAAGAAAATTATGCTTGAACTTTGAAGGCGACATGTATCCGTTGCACCACATATATTTTTTGTATAGCAAATTGTGTTCTGGACGCAATCTAAATTGTGCATTTCTGTTGTTATTTCTTTATGATGTCATGTACGAACAGACTTGAAAGGCCATAAGAGTATTGCTCAAGCTTGTAAAGTTTTTAGCAGCAGTTCCACTCAAGTAGTTTTTTAACTTTTATGAGCAAATTGAGAAAA CTTTCTTCTCCTTAAAAATTCTGTTTCAGGTTACCCATTTAATATTTATTATAAAAAAATGAAAATAATTATTAAAAAAAAATCCATAAATTTTCCTACTTGTTTCACTCTCCGTCTTTTTCTGCTCTTTGATTCTCTCTAAATTTTCGGGTTCTTCTTTTGCTGTAGCTTTTGTGGGTTTAATAGAAATGGCAACTGTTCAGCCACTTACAAATGGAGTTTCTGAGATTACTCAAGAGGAAGACGACCAGATTGTGAAATCTGTAAATGAACAGACTTCAGTTGCTGGACATAGTAGTAGACGTCCTGATATTTCACTTCAAATACCCCCGAGATCGTCGGGTTTTGGTAAAAGCCGTAGTGGGAAAGGTTTACTGCAATCTCAAGCTTCCGGTAAGGGTGGTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGAAAAGGCATTGCTGCTGAAGGTGAGAGAAGTTCACTTCTAAGTTTGGACCCGAAGACAACTGCTGAAAGTCCGATAATGGCTGCTTTCGCTTCACATTTTTCGTGGCAAAAATCCAACTCTCTCCCAGTTACTCCAGCATCAAACTTGTCCCCCTCGGTTCCCATCCCCGCCACGACAACTGCCACCAATGAAAGGCCAATCCCACATAAAGAAGCAGCCCGGGCAGTTTCGAGATCTCTATCCGTGCCCAGTAGAAGTATCATTATAGTACGATCGACATCTTTCGCTACCCCGAAAGAAAATTCTGTGGCCAGTACCAGTTCTGATCAAAATGGTTCTGCTGCCTTAGAAAATGATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATCTGTCTTGAACCATGCGAAGAAGAAAACACTCTCAAAATGGAATGCAGTTGCAAGGGAGCCCTTAGGCTTTTACATAAAGATTGTGCAATAGAATGGTTTAGCAGAAAAGGAAACAAGAACTGTGAAGTCTGTAGGCAGGAGGTAAAGAATTTACCCGTCACATTACTCCGCATTCCGACCACTGCACAACGGGACGGAGGATCGCTGCATAATCAACTGACTCTCCGTTCGCGGACGATAAGTGCCTGGCAGGACTTTGTGGTGCTTGTTTTAATCAGCACAATATGCTACTTCTTCTTCCTTGAGCAGCTTCTGGTTCACGACTTGAGGACTCAAGCGATCATTTACGCTGCGCCTTTTGCATTGGTGTTTGGTCTCATGTCATCGATATTCTCTGTCATTCTCGCAATCAAGGAGTATATATGGACATATGCAGCTCTAGAGTTTGCACTTGTAGCTATTATTCTTCATCTATTCTATACTTTGCTAAAACTGAAGGTCATATATGCCATATTGCTGTCTGCAATCTTGGGTTTTGGTGTGGCTATGAGCCTGAACTCTATATACATTCATTACTACATGTGGCGAGTTCGAGTCGCTCAAAATCCTAGCCCAGTGTAAGACGATAACCCCGTCTTCTGTATCTTCCTTTCCAACGATAATTCGGTGCAAGATGAGCAAAATGCAGGTAGATCCCATTTTACATGAAAAATTCCAGGTATCTAATGAGTAAATGATCATGATCATAATCAAGATGATACGAGAGTTTTGAGTCGCCTAAACAATCAAAGTTCGCATTGATGATATCAATAGACGAGCTCCAGCTGCAACAGATAATGAAAGAAAATTATGCTTGAACTTTGAAGGCGACATGTATCCGTTGCACCACATATATTTTTTGTATAGCAAATTGTGTTCTGGACGCAATCTAAATTGTGCATTTCTGTTGTTATTTCTTTATGATGTCATGTACGAACAGACTTGAAAGGCCATAAGAGTATTGCTCAAGCTTGTAAAGTTTTTAGCAGCAGTTCCACTCAAGTAGTTTTTTAACTTTTATGAGCAAATTGAGAAAA ATGGCAACTGTTCAGCCACTTACAAATGGAGTTTCTGAGATTACTCAAGAGGAAGACGACCAGATTGTGAAATCTGTAAATGAACAGACTTCAGTTGCTGGACATAGTAGTAGACGTCCTGATATTTCACTTCAAATACCCCCGAGATCGTCGGGTTTTGGTAAAAGCCGTAGTGGGAAAGGTTTACTGCAATCTCAAGCTTCCGGTAAGGGTGGTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGAAAAGGCATTGCTGCTGAAGGTGAGAGAAGTTCACTTCTAAGTTTGGACCCGAAGACAACTGCTGAAAGTCCGATAATGGCTGCTTTCGCTTCACATTTTTCGTGGCAAAAATCCAACTCTCTCCCAGTTACTCCAGCATCAAACTTGTCCCCCTCGGTTCCCATCCCCGCCACGACAACTGCCACCAATGAAAGGCCAATCCCACATAAAGAAGCAGCCCGGGCAGTTTCGAGATCTCTATCCGTGCCCAGTAGAAGTATCATTATAGTACGATCGACATCTTTCGCTACCCCGAAAGAAAATTCTGTGGCCAGTACCAGTTCTGATCAAAATGGTTCTGCTGCCTTAGAAAATGATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATCTGTCTTGAACCATGCGAAGAAGAAAACACTCTCAAAATGGAATGCAGTTGCAAGGGAGCCCTTAGGCTTTTACATAAAGATTGTGCAATAGAATGGTTTAGCAGAAAAGGAAACAAGAACTGTGAAGTCTGTAGGCAGGAGGTAAAGAATTTACCCGTCACATTACTCCGCATTCCGACCACTGCACAACGGGACGGAGGATCGCTGCATAATCAACTGACTCTCCGTTCGCGGACGATAAGTGCCTGGCAGGACTTTGTGGTGCTTGTTTTAATCAGCACAATATGCTACTTCTTCTTCCTTGAGCAGCTTCTGGTTCACGACTTGAGGACTCAAGCGATCATTTACGCTGCGCCTTTTGCATTGGTGTTTGGTCTCATGTCATCGATATTCTCTGTCATTCTCGCAATCAAGGAGTATATATGGACATATGCAGCTCTAGAGTTTGCACTTGTAGCTATTATTCTTCATCTATTCTATACTTTGCTAAAACTGAAGGTCATATATGCCATATTGCTGTCTGCAATCTTGGGTTTTGGTGTGGCTATGAGCCTGAACTCTATATACATTCATTACTACATGTGGCGAGTTCGAGTCGCTCAAAATCCTAGCCCAGTGTAA MATVQPLTNGVSEITQEEDDQIVKSVNEQTSVAGHSSRRPDISLQIPPRSSGFGKSRSGKGLLQSQASGKGGLSPGSFLRALSFKRKGIAAEGERSSLLSLDPKTTAESPIMAAFASHFSWQKSNSLPVTPASNLSPSVPIPATTTATNERPIPHKEAARAVSRSLSVPSRSIIIVRSTSFATPKENSVASTSSDQNGSAALENDDEEIPEEEAVCRICLEPCEEENTLKMECSCKGALRLLHKDCAIEWFSRKGNKNCEVCRQEVKNLPVTLLRIPTTAQRDGGSLHNQLTLRSRTISAWQDFVVLVLISTICYFFFLEQLLVHDLRTQAIIYAAPFALVFGLMSSIFSVILAIKEYIWTYAALEFALVAIILHLFYTLLKLKVIYAILLSAILGFGVAMSLNSIYIHYYMWRVRVAQNPSPV Homology
BLAST of Tan0020010 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.8e-09 Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 0
BLAST of Tan0020010 vs. NCBI nr
Match: KAG6593940.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 704.5 bits (1817), Expect = 5.5e-199 Identity = 374/424 (88.21%), Postives = 399/424 (94.10%), Query Frame = 0
BLAST of Tan0020010 vs. NCBI nr
Match: XP_022930264.1 (uncharacterized protein LOC111436767 [Cucurbita moschata]) HSP 1 Score: 704.5 bits (1817), Expect = 5.5e-199 Identity = 376/424 (88.68%), Postives = 398/424 (93.87%), Query Frame = 0
BLAST of Tan0020010 vs. NCBI nr
Match: XP_023514257.1 (uncharacterized protein LOC111778580 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 704.1 bits (1816), Expect = 7.2e-199 Identity = 374/424 (88.21%), Postives = 397/424 (93.63%), Query Frame = 0
BLAST of Tan0020010 vs. NCBI nr
Match: XP_023000610.1 (uncharacterized protein LOC111494848 [Cucurbita maxima]) HSP 1 Score: 702.2 bits (1811), Expect = 2.7e-198 Identity = 375/424 (88.44%), Postives = 397/424 (93.63%), Query Frame = 0
BLAST of Tan0020010 vs. NCBI nr
Match: XP_038906457.1 (uncharacterized protein LOC120092441 [Benincasa hispida]) HSP 1 Score: 689.1 bits (1777), Expect = 2.4e-194 Identity = 364/424 (85.85%), Postives = 390/424 (91.98%), Query Frame = 0
BLAST of Tan0020010 vs. ExPASy TrEMBL
Match: A0A6J1ER12 (uncharacterized protein LOC111436767 OS=Cucurbita moschata OX=3662 GN=LOC111436767 PE=4 SV=1) HSP 1 Score: 704.5 bits (1817), Expect = 2.7e-199 Identity = 376/424 (88.68%), Postives = 398/424 (93.87%), Query Frame = 0
BLAST of Tan0020010 vs. ExPASy TrEMBL
Match: A0A6J1KIU9 (uncharacterized protein LOC111494848 OS=Cucurbita maxima OX=3661 GN=LOC111494848 PE=4 SV=1) HSP 1 Score: 702.2 bits (1811), Expect = 1.3e-198 Identity = 375/424 (88.44%), Postives = 397/424 (93.63%), Query Frame = 0
BLAST of Tan0020010 vs. ExPASy TrEMBL
Match: A0A1S3C838 (E3 ubiquitin-protein ligase MARCH7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497891 PE=4 SV=1) HSP 1 Score: 672.2 bits (1733), Expect = 1.5e-189 Identity = 358/424 (84.43%), Postives = 387/424 (91.27%), Query Frame = 0
BLAST of Tan0020010 vs. ExPASy TrEMBL
Match: A0A0A0KEI7 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G067930 PE=4 SV=1) HSP 1 Score: 666.8 bits (1719), Expect = 6.1e-188 Identity = 354/423 (83.69%), Postives = 386/423 (91.25%), Query Frame = 0
BLAST of Tan0020010 vs. ExPASy TrEMBL
Match: A0A6J1CAN1 (uncharacterized protein LOC111009750 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009750 PE=4 SV=1) HSP 1 Score: 646.7 bits (1667), Expect = 6.6e-182 Identity = 349/425 (82.12%), Postives = 381/425 (89.65%), Query Frame = 0
BLAST of Tan0020010 vs. TAIR 10
Match: AT3G06330.1 (RING/U-box superfamily protein ) HSP 1 Score: 366.3 bits (939), Expect = 3.3e-101 Identity = 214/402 (53.23%), Postives = 275/402 (68.41%), Query Frame = 0
BLAST of Tan0020010 vs. TAIR 10
Match: AT3G06330.2 (RING/U-box superfamily protein ) HSP 1 Score: 314.3 bits (804), Expect = 1.5e-85 Identity = 159/257 (61.87%), Postives = 203/257 (78.99%), Query Frame = 0
BLAST of Tan0020010 vs. TAIR 10
Match: AT5G18760.1 (RING/U-box superfamily protein ) HSP 1 Score: 289.3 bits (739), Expect = 5.1e-78 Identity = 190/412 (46.12%), Postives = 251/412 (60.92%), Query Frame = 0
BLAST of Tan0020010 vs. TAIR 10
Match: AT3G06330.3 (RING/U-box superfamily protein ) HSP 1 Score: 276.6 bits (706), Expect = 3.4e-74 Identity = 169/336 (50.30%), Postives = 218/336 (64.88%), Query Frame = 0
BLAST of Tan0020010 vs. TAIR 10
Match: AT5G60580.1 (RING/U-box superfamily protein ) HSP 1 Score: 201.1 bits (510), Expect = 1.8e-51 Identity = 155/430 (36.05%), Postives = 229/430 (53.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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