Tan0019994 (gene) Snake gourd v1

Overview
NameTan0019994
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionJosephin-like protein
LocationLG05: 3150448 .. 3151156 (+)
RNA-Seq ExpressionTan0019994
SyntenyTan0019994
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGCTGCATTTTTCAGTCGTGTGTACGTCTATTTTCTCATCTCTTTTTCTCTTTGCGTTTTATTTGGTATTTCAATTCATTTTAATCTCTCTCTCAGAAACTTCCCTCTTTCTCTTTCTAGTCTCGGACCTTCTTCTAATTCTATGACGACAACAGTGGAGCAAAAGATTGAGAAACAGAACTCGTCAAGCAACAGAACTGGGCGAAACAGAGGGTCTTTTCCAAAGTGCAGATTTATTAGACCGCTTAAAGGGCTGCAATTCTCTCCGCTGAGTTTTCTGAAGCACCTGGCAGATAAAGTGACCCGAGCTTTGCATTTGATGGCCTTGAAGAGAAGACCCCGCCACGAACAACCCACTGCGGCCGTGCCCGTCGCCGGTTCGAAGCCGCTGCCGGTCTCTGCCGTTGATTCGCATAGAACAGAGGCTGTGGAAGACTGCATCAAGTACATCAACTCTTCGTCTTAGCTCACACCAATTCTTGTAAGATTTTCTTCCGAAAATGCGTATATATGTCATGCCTGTGTTGATTTAATGTCTGATTTCATTGTTGTGGATCATGATGCAATGCTGTTTTTCAGTCTTTTTTTTTTTTATGAAATATTGGGGGGGGAATGTTATCAATTATCATGATTCTTAGGCCAGTAGGTGGAATAAGCCTATCATATAATAATATATTTGTTCAAGAAGATCTATTGCGGAATTGAAA

mRNA sequence

CGGGCTGCATTTTTCAGTCGTGTGTACGTCTATTTTCTCATCTCTTTTTCTCTTTGCGTTTTATTTGGTATTTCAATTCATTTTAATCTCTCTCTCAGAAACTTCCCTCTTTCTCTTTCTAGTCTCGGACCTTCTTCTAATTCTATGACGACAACAGTGGAGCAAAAGATTGAGAAACAGAACTCGTCAAGCAACAGAACTGGGCGAAACAGAGGGTCTTTTCCAAAGTGCAGATTTATTAGACCGCTTAAAGGGCTGCAATTCTCTCCGCTGAGTTTTCTGAAGCACCTGGCAGATAAAGTGACCCGAGCTTTGCATTTGATGGCCTTGAAGAGAAGACCCCGCCACGAACAACCCACTGCGGCCGTGCCCGTCGCCGGTTCGAAGCCGCTGCCGGTCTCTGCCGTTGATTCGCATAGAACAGAGGCTGTGGAAGACTGCATCAAGTACATCAACTCTTCGTCTTAGCTCACACCAATTCTTGTAAGATTTTCTTCCGAAAATGCGTATATATGTCATGCCTGTGTTGATTTAATGTCTGATTTCATTGTTGTGGATCATGATGCAATGCTGTTTTTCAGTCTTTTTTTTTTTTATGAAATATTGGGGGGGGAATGTTATCAATTATCATGATTCTTAGGCCAGTAGGTGGAATAAGCCTATCATATAATAATATATTTGTTCAAGAAGATCTATTGCGGAATTGAAA

Coding sequence (CDS)

ATGACGACAACAGTGGAGCAAAAGATTGAGAAACAGAACTCGTCAAGCAACAGAACTGGGCGAAACAGAGGGTCTTTTCCAAAGTGCAGATTTATTAGACCGCTTAAAGGGCTGCAATTCTCTCCGCTGAGTTTTCTGAAGCACCTGGCAGATAAAGTGACCCGAGCTTTGCATTTGATGGCCTTGAAGAGAAGACCCCGCCACGAACAACCCACTGCGGCCGTGCCCGTCGCCGGTTCGAAGCCGCTGCCGGTCTCTGCCGTTGATTCGCATAGAACAGAGGCTGTGGAAGACTGCATCAAGTACATCAACTCTTCGTCTTAG

Protein sequence

MTTTVEQKIEKQNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPRHEQPTAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS
Homology
BLAST of Tan0019994 vs. NCBI nr
Match: KAG6570666.1 (hypothetical protein SDJN03_29581, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.7 bits (387), Expect = 9.1e-34
Identity = 84/107 (78.50%), Postives = 92/107 (85.98%), Query Frame = 0

Query: 2   TTTVEQKIEKQNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMA 61
           T T+EQ+IEK+N SSN T R+ GSF K RF + LKGLQFSPLSFLKHLA+KVTRA HLMA
Sbjct: 3   TATMEQRIEKRNMSSNATRRSTGSFRKLRF-KSLKGLQFSPLSFLKHLANKVTRAWHLMA 62

Query: 62  LKRRPRHE-QPTAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
           +KRRP HE QP  A+PVA SKPLPVSAVDSHRTEAVEDCIKYINSSS
Sbjct: 63  MKRRPHHEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS 108

BLAST of Tan0019994 vs. NCBI nr
Match: XP_038902310.1 (uncharacterized protein LOC120088944 [Benincasa hispida])

HSP 1 Score: 151.0 bits (380), Expect = 5.9e-33
Identity = 80/109 (73.39%), Postives = 91/109 (83.49%), Query Frame = 0

Query: 1   MTTTVEQKIEKQNSSSNRTGRNRGSFPKCRFIRP--LKGLQFSPLSFLKHLADKVTRALH 60
           MTTT+E  I+KQNSSSN+T R RG+F KCRF  P  LKGLQFSPLSFLK LAD+V RALH
Sbjct: 1   MTTTLE--IDKQNSSSNKTERGRGAFQKCRFRSPKSLKGLQFSPLSFLKCLADRVARALH 60

Query: 61  LMALKRRPRHEQPTAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
           LMA+KRRP H+QP  AVPV  SKP+  SA+DSHRTEAVEDCIKYIN+S+
Sbjct: 61  LMAMKRRPCHKQPAPAVPVVSSKPIQASAIDSHRTEAVEDCIKYINAST 107

BLAST of Tan0019994 vs. NCBI nr
Match: KAG7010513.1 (Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 8   KIEKQNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPR 67
           +IEK+N SSN T R+ GSF K RF + LKGLQFSPLSFLKHLA+KVTRA HLMA+KRRP 
Sbjct: 195 RIEKRNMSSNATRRSTGSFRKLRF-KSLKGLQFSPLSFLKHLANKVTRAWHLMAMKRRPH 254

Query: 68  HE-QPTAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
           HE QP  A+PVA SKPLPVSAVDSHRTEAVEDCIKYINSSS
Sbjct: 255 HEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS 294

BLAST of Tan0019994 vs. NCBI nr
Match: XP_023512266.1 (uncharacterized protein LOC111777056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 8   KIEKQNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPR 67
           +IEK+N SSN T R+ GSF K RF + LKGLQFSPLSFLKHLA+KVTRA HLMA+KRRP 
Sbjct: 266 RIEKRNMSSNATRRSTGSFRKLRF-KSLKGLQFSPLSFLKHLANKVTRAWHLMAMKRRPH 325

Query: 68  HE-QPTAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
           HE QP  A+PVA SKPLPVSAVDSHRTEAVEDCIKYINSSS
Sbjct: 326 HEQQPVPAMPVATSKPLPVSAVDSHRTEAVEDCIKYINSSS 365

BLAST of Tan0019994 vs. NCBI nr
Match: KAG7035372.1 (hypothetical protein SDJN02_02168, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-31
Identity = 81/109 (74.31%), Postives = 87/109 (79.82%), Query Frame = 0

Query: 1   MTTTVEQKIEKQNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLM 60
           M TT+EQ       SSNRT + RGSF KCRF R LKGLQFSPLSFLKHLADKVTRA HLM
Sbjct: 24  MATTMEQ-------SSNRTEQTRGSFQKCRF-RSLKGLQFSPLSFLKHLADKVTRAWHLM 83

Query: 61  ALKRRPRHEQPT--AAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
            +KR+PRHEQ    A V +A SKPLPVSA+DSHRTEAVEDCIKYINSSS
Sbjct: 84  GMKRKPRHEQTAAPAVVSIANSKPLPVSAIDSHRTEAVEDCIKYINSSS 124

BLAST of Tan0019994 vs. ExPASy TrEMBL
Match: A0A5A7V4L5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00520 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.5e-29
Identity = 76/110 (69.09%), Postives = 86/110 (78.18%), Query Frame = 0

Query: 2   TTTVEQKIEKQNSSSNRTGRNRGSFPKCRFIRP--LKGLQFSPLSFLKHLADKVTRALHL 61
           TTT+EQK++K NSSSN     R +F KCRF  P  LKGLQFSPL FLKHLADKVTRALH 
Sbjct: 3   TTTLEQKVKKPNSSSNNNRTGRSTFQKCRFRSPKSLKGLQFSPLCFLKHLADKVTRALHF 62

Query: 62  MALKR-RPRHEQPTAAVPVAGSKPLPVSA-VDSHRTEAVEDCIKYINSSS 108
           MA+KR RP  +QP  AVP+A SK + V A VDSHRTEAVEDCIKYIN+S+
Sbjct: 63  MAMKRNRPLQKQPVPAVPLASSKAIQVPATVDSHRTEAVEDCIKYINAST 112

BLAST of Tan0019994 vs. ExPASy TrEMBL
Match: A0A0A0KE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G187920 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.4e-26
Identity = 79/113 (69.91%), Postives = 90/113 (79.65%), Query Frame = 0

Query: 1   MTTTVEQKIEKQNSSS-NRTGRNRGSFPKCRFIRP--LKGLQFSPLSFLKHLADKVTRAL 60
           MTTT+EQK++K NSSS NRTGR+  +F KCRF  P  LK LQFSPL FLKHLADKVTRAL
Sbjct: 1   MTTTLEQKVKKPNSSSNNRTGRS--TFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRAL 60

Query: 61  HLMALKR-RPRHEQPT-AAVPVAGSKPLPVSA-VDSHRTEAVEDCIKYINSSS 108
           H MA+KR RP  +Q   AAVPVA SK + V A +DSHRTEAVEDCIKYIN+S+
Sbjct: 61  HFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYINAST 111

BLAST of Tan0019994 vs. ExPASy TrEMBL
Match: A0A6J0ZV01 (Ubiquitinyl hydrolase 1 OS=Herrania umbratica OX=108875 GN=LOC110412435 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 0

Query: 15  SSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPRHEQPTAA 74
           S N+  RNRG    C F+   K  +FSP+ FLKH+  KV + LH+++++ RP    P  +
Sbjct: 207 SDNKAARNRGVTRSCGFML-CKRSKFSPVRFLKHIGGKVAKGLHVVSMRIRP---SPKVS 266

Query: 75  VPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
                SKP  V+ VDSHR+ A+EDCI++INSS+
Sbjct: 267 SSSGRSKPF-VTPVDSHRSAAIEDCIEFINSSA 294

BLAST of Tan0019994 vs. ExPASy TrEMBL
Match: A0A6P5ZTY5 (josephin-like protein OS=Durio zibethinus OX=66656 GN=LOC111303725 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-09
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0

Query: 12  QNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPRHEQP 71
           Q S++     NRG    C F+R  K  +FSP+ FLKHL  KV + LH+++++ RP    P
Sbjct: 24  QKSTARAAPENRGVTRSCGFMR-CKRFKFSPIRFLKHLGGKVAKGLHVVSMRIRP---SP 83

Query: 72  TAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
             +     SKP  V+ VD+HR  A+EDCI++INSS+
Sbjct: 84  KVSSSSGRSKPF-VTPVDTHRNAAIEDCIEFINSSA 114

BLAST of Tan0019994 vs. ExPASy TrEMBL
Match: A0A6A1VD78 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G009091 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.8e-09
Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 12  QNSSSNRTGRNRG-SFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPRHEQ 71
           + + S R   N G +   CRF  P KG +  P+ FLKH+ADK+ RALH  +L+R     Q
Sbjct: 11  ERNYSKRVSANSGFARQYCRFKLP-KGPEL-PIRFLKHIADKIARALHSASLRR----SQ 70

Query: 72  PTAAVPVAGSKPLPVSAVDSHRTEAVEDCIKYINSSS 108
                    SKP+    VDSHRTEA+EDCI+++NSSS
Sbjct: 71  SAKDSSFGSSKPIVAMTVDSHRTEAIEDCIEFLNSSS 101

BLAST of Tan0019994 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 50.8 bits (120), Expect = 7.7e-07
Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 0

Query: 11  KQNSSSNRTGRNRGSFPKCRFIRPLKGLQFSPLSFLKHLADKVTRALHLMALKRRPRHEQ 70
           KQ +     G++ G    C    P K  + +    +KHL  K  + L L+ ++++ R   
Sbjct: 23  KQTAIKGPYGKSPGCTTSCGLRLPRK-TEVTAAKLIKHLGCKFAKGLRLVVMRKKKR-SP 82

Query: 71  PTAAVPVAGSKPLPVSAV--DSHRTEAVEDCIKYINSSS 108
           P+     +G    P+  +  DSHR+EA+EDCI++INSSS
Sbjct: 83  PSKVSSFSGRSQPPIIPINNDSHRSEAIEDCIQFINSSS 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6570666.19.1e-3478.50hypothetical protein SDJN03_29581, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038902310.15.9e-3373.39uncharacterized protein LOC120088944 [Benincasa hispida][more]
KAG7010513.11.1e-3179.21Josephin-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023512266.11.1e-3179.21uncharacterized protein LOC111777056 [Cucurbita pepo subsp. pepo][more]
KAG7035372.12.5e-3174.31hypothetical protein SDJN02_02168, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A5A7V4L59.5e-2969.09Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold57... [more]
A0A0A0KE453.4e-2669.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G187920 PE=4 SV=1[more]
A0A6J0ZV011.3e-0944.09Ubiquitinyl hydrolase 1 OS=Herrania umbratica OX=108875 GN=LOC110412435 PE=4 SV=... [more]
A0A6P5ZTY52.2e-0942.71josephin-like protein OS=Durio zibethinus OX=66656 GN=LOC111303725 PE=4 SV=1[more]
A0A6A1VD783.8e-0945.36Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G009091 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G07300.17.7e-0732.32josephin protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR34355JOSEPHIN-LIKE PROTEINcoord: 5..107
NoneNo IPR availablePANTHERPTHR34355:SF7JOSEPHIN PROTEIN-LIKE PROTEINcoord: 5..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0019994.1Tan0019994.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity