Tan0019987 (gene) Snake gourd v1

Overview


Name	Tan0019987
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG04: 59249522 .. 59250508 (+)
RNA-Seq Expression	Tan0019987
Synteny	Tan0019987

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAACCCAAGGGGTTCATTGCCCAAGGCCAAGAGCAAAGAGTTTGCTGGCTTCGAAGGTCTATTTATGGAATGAAACAAGCCTCGAGGTCTTAGAATATAAGGTTTGATGAGGCGATCAATTCTTATGGCTTTGATCAAAATGTTAACGAGCCTTGTGTCTACAAGAAAATCGTTAACAACACTGTCGCATTTCTAATATTGTGTGTGGATGATATCCTTCTCATTGGGATTGAGGTAGGACTTCTTACTGACATTAAGGAATGGTTGGCTTCGCAATACCAAATGAAAGATTTGGGAGAGGCACAGTATACTCTAAGTATCCAGATAGTCCGAAACCGGAAGAATAGAACGCTAGCCATGTCTAAGGCGTCTTATATTAACAAGATGTTGTCTAGATATAAGATGCAGAACTCCAAGAAGGGTTTGCTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGATCAATGTCCTAAGACACCTCGAGAGGTTGAGGATATGAGACGAATCCCCTATGCTTCAGCTATAAGGAGCATGATGTATGTCATGTTGTGTACTAGGCACAACATCTGTTATGCAGTTGGGATTGTCACTAGGTATCAATCCAATCCAGGATTAGATCACTGGGCAGCCGTAAAGGCAATCCTCAAGTATCTTAGGAGAATGAGGAACTACAACCTTGTGTATTGAAGTGGGGATTTGATCCTTAATTTGATCCTTACGGGATACACAGATTATGACTTTCAGACCGATAAGGATTCTAGGAAATCCACTTCGGGGTCAGCCTTCATTCTAAATGCAGGAGCTGTAGTGTGGCGAAGCTTCAAGCAGGGATGTATCGCTGATTCCACGATGGAAGCCGAATATGTTGCGGCTTGTGAAGCTGCAAAGGAAGCTGTTTGGCTTAGGAAGATGATGCTAGATTTGGAAGTTGTTCCAAATATGAACTTGCCAATCACGTTGGTGACAACAGTGGTGCAGTAG

mRNA sequence

ATGGACCAACCCAAGGGGTTCATTGCCCAAGGCCAAGAGCAAAGAGTTTGCTGGCTTCGAAGGTTTGATGAGGCGATCAATTCTTATGGCTTTGATCAAAATGTTAACGAGCCTTGTGTCTACAAGAAAATCGTTAACAACACTGTCGCATTTCTAATATTGTGTGTGGATGATATCCTTCTCATTGGGATTGAGGTAGGACTTCTTACTGACATTAAGGAATGGTTGGCTTCGCAATACCAAATGAAAGATTTGGGAGAGGCACAGTATACTCTAAGTATCCAGATAGTCCGAAACCGGAAGAATAGAACGCTAGCCATGTCTAAGGCGTCTTATATTAACAAGATGTTGTCTAGATATAAGATGCAGAACTCCAAGAAGGGTTTGCTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGATCAATGTCCTAAGACACCTCGAGAGGTTGAGGATATGAGACGAATCCCCTATGCTTCAGCTATAAGGAGCATGATGTATGTCATGTTGTGTACTAGGCACAACATCTGTTATGCAGTTGGGATTGTCACTAGGTATCAATCCAATCCAGGATTAGATCACTGGGCAGCCGTAAAGGCAATCCTCAATGGGGATTTGATCCTTAATTTGATCCTTACGGGATACACAGATTATGACTTTCAGACCGATAAGGATTCTAGGAAATCCACTTCGGGGTCAGCCTTCATTCTAAATGCAGGAGCTGTAGTGTGGCGAAGCTTCAAGCAGGGATGTATCGCTGATTCCACGATGGAAGCCGAATATGTTGCGGCTTGTGAAGCTGCAAAGGAAGCTGTTTGGCTTAGGAAGATGATGCTAGATTTGGAAGTTGTTCCAAATATGAACTTGCCAATCACGTTGGTGACAACAGTGGTGCAGTAG

Coding sequence (CDS)

ATGGACCAACCCAAGGGGTTCATTGCCCAAGGCCAAGAGCAAAGAGTTTGCTGGCTTCGAAGGTTTGATGAGGCGATCAATTCTTATGGCTTTGATCAAAATGTTAACGAGCCTTGTGTCTACAAGAAAATCGTTAACAACACTGTCGCATTTCTAATATTGTGTGTGGATGATATCCTTCTCATTGGGATTGAGGTAGGACTTCTTACTGACATTAAGGAATGGTTGGCTTCGCAATACCAAATGAAAGATTTGGGAGAGGCACAGTATACTCTAAGTATCCAGATAGTCCGAAACCGGAAGAATAGAACGCTAGCCATGTCTAAGGCGTCTTATATTAACAAGATGTTGTCTAGATATAAGATGCAGAACTCCAAGAAGGGTTTGCTGCCTTTCAGGCATGGGGTTCACTTGTCTAAGGATCAATGTCCTAAGACACCTCGAGAGGTTGAGGATATGAGACGAATCCCCTATGCTTCAGCTATAAGGAGCATGATGTATGTCATGTTGTGTACTAGGCACAACATCTGTTATGCAGTTGGGATTGTCACTAGGTATCAATCCAATCCAGGATTAGATCACTGGGCAGCCGTAAAGGCAATCCTCAATGGGGATTTGATCCTTAATTTGATCCTTACGGGATACACAGATTATGACTTTCAGACCGATAAGGATTCTAGGAAATCCACTTCGGGGTCAGCCTTCATTCTAAATGCAGGAGCTGTAGTGTGGCGAAGCTTCAAGCAGGGATGTATCGCTGATTCCACGATGGAAGCCGAATATGTTGCGGCTTGTGAAGCTGCAAAGGAAGCTGTTTGGCTTAGGAAGATGATGCTAGATTTGGAAGTTGTTCCAAATATGAACTTGCCAATCACGTTGGTGACAACAGTGGTGCAGTAG

Protein sequence

MDQPKGFIAQGQEQRVCWLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILNGDLILNLILTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEVVPNMNLPITLVTTVVQ

Homology

[Close]

BLAST of Tan0019987 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-59
Identity = 124/307 (40.39%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVY-KKI 60
            M+QP+GF   G++  VC               W  +FD  + S  + +  ++PCVY K+ 
Sbjct: 938  MEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF 997

Query: 61   VNNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRT 120
              N    L+L VDD+L++G + GL+  +K  L+  + MKDLG AQ  L ++IVR R +R 
Sbjct: 998  SENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRK 1057

Query: 121  LAMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRS 180
            L +S+  YI ++L R+ M+N+K    P    + LSK  CP T  E  +M ++PY+SA+ S
Sbjct: 1058 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1117

Query: 181  MMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL------NGDLIL----NLILTG 240
            +MY M+CTR +I +AVG+V+R+  NPG +HW AVK IL       GD +     + IL G
Sbjct: 1118 LMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKG 1177

Query: 241  YTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL 282
            YTD D   D D+RKS++G  F  + GA+ W+S  Q C+A ST EAEY+AA E  KE +WL
Sbjct: 1178 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWL 1237

[Close]

BLAST of Tan0019987 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 4.8e-27
Identity = 79/287 (27.53%), Postives = 150/287 (52.26%), Query Frame = 0


Query: 17   CWLRRFDEAINSYGFDQNVNEPCVY---KKIVNNTVAFLILCVDDILLIGIEVGLLTDIK 76
            CW   F++A+    F  +  + C+Y   K  +N  + +++L VDD+++   ++  + + K
Sbjct: 1047 CWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFK 1106

Query: 77   EWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFR 136
             +L  +++M DL E ++ + I+I    +   + +S+++Y+ K+LS++ M+N      P  
Sbjct: 1107 RYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLP 1166

Query: 137  HGVH---LSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNP 196
              ++   L+ D+   T          P  S I  +MY+MLCTR ++  AV I++RY S  
Sbjct: 1167 SKINYELLNSDEDCNT----------PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKN 1226

Query: 197  GLDHWAAVKAI---LNGDLILNLI----------LTGYTDYDFQTDKDSRKSTSGSAF-I 256
              + W  +K +   L G + + LI          + GY D D+   +  RKST+G  F +
Sbjct: 1227 NSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKM 1286

Query: 257  LNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEV 284
             +   + W + +Q  +A S+ EAEY+A  EA +EA+WL+ ++  + +
Sbjct: 1287 FDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI 1320

[Close]

BLAST of Tan0019987 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 153 MRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAILNGDLILNLI- 212
           M+ +PY SA+ ++MY+M+ TR ++  AVG+++++ S+P   HW A+K +L          
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 213 ----------LTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEY 272
                     L GY+D D+  D +SR+STSG  F LN G V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 273 VAACEAAKEAVWL 275
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Tan0019987 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.2e-19
Identity = 85/309 (27.51%), Postives = 139/309 (44.98%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVCWLRR------------FDEAIN---SYGFDQNVNEPCVYKKIV 60
            M QP GFI + +   VC LR+            + E  N   + GF  +V++  ++    
Sbjct: 1081 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1140

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
              ++ ++++ VDDIL+ G +  LL +  + L+ ++ +KD  E  Y L I+    R    L
Sbjct: 1141 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGL 1200

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
             +S+  YI  +L+R  M  +K    P      LS     K     E      Y   + S+
Sbjct: 1201 HLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSL 1260

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-------NGDLIL----NLILTG 240
             Y+   TR +I YAV  ++++   P  +H  A+K IL       N  + L     L L  
Sbjct: 1261 QYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHA 1320

Query: 241  YTDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWL 284
            Y+D D+  DKD   ST+G    L    + W S KQ  +  S+ EAEY +    + E  W+
Sbjct: 1321 YSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWI 1380

[Close]

BLAST of Tan0019987 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.4e-12
Identity = 69/236 (29.24%), Postives = 107/236 (45.34%), Query Frame = 0


Query: 51  FLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKA 110
           +L+L VDDILL G    LL  +   L+S + MKDLG   Y L IQI  +     L +S+ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 111 SYINKMLSRYKMQNSK--KGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYV 170
            Y  ++L+   M + K     LP +    +S  + P    +  D R     S + ++ Y+
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFR-----SIVGALQYL 121

Query: 171 MLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL---NGDLILNLIL--------TGYTD 230
            L TR +I YAV IV +    P L  +  +K +L    G +   L +          + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 231 YDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVW 274
            D+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Tan0019987 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 5.3e-124
Identity = 233/318 (73.27%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 840  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 899

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
               VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDLGEAQY L IQI+R+RKN+TL
Sbjct: 900  KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 959

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 960  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 1019

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
            MY MLCTR +ICYAVGIV+RYQSNPGLDHW AVK +L       D +L     +LILTGY
Sbjct: 1020 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGY 1079

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            TD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 1080 TDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR 1139

[Close]

BLAST of Tan0019987 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 5.3e-124
Identity = 233/318 (73.27%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 714  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 773

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
               VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDLGEAQY L IQI+R+RKN+TL
Sbjct: 774  KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 833

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 834  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 893

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
            MY MLCTR +ICYAVGIV+RYQSNPGLDHW AVK +L       D +L     +LILTGY
Sbjct: 894  MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGY 953

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            TD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 954  TDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR 1013

[Close]

BLAST of Tan0019987 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-122
Identity = 231/318 (72.64%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 1   MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
           M QP+GFI Q QEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 1   MSQPEGFITQSQEQKVCKLNRSIYGSKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 60

Query: 61  NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
              VAFL+L VDDILLIG + G LTD+K WLA+Q+QMKDLGEAQY L IQI+R+RKN+TL
Sbjct: 61  KGKVAFLVLYVDDILLIGNDAGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 120

Query: 121 AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
           A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 121 ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 180

Query: 181 MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
           MY MLCTR +ICYAVGIV+RYQSNPGLDHW  VK IL       D +L     +LILTGY
Sbjct: 181 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGY 240

Query: 241 TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
           TD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 241 TDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR 300

[Close]

BLAST of Tan0019987 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 447.6 bits (1150), Expect = 8.5e-122
Identity = 230/318 (72.33%), Postives = 257/318 (80.82%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 840  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 899

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
               VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDLGE QY L IQI+R+RKN+TL
Sbjct: 900  KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTL 959

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 960  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 1019

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
            MY MLCTR +ICYAVGIV+RYQSNPGLDHW AVK IL       D +L     +LILTGY
Sbjct: 1020 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGY 1079

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            T+ DFQTDKDSRKSTS S F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWL+
Sbjct: 1080 TNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLK 1139

[Close]

BLAST of Tan0019987 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-121
Identity = 231/318 (72.64%), Postives = 260/318 (81.76%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFIAQ QEQ+VC               W  RFD AI SYGF+QNV+EPCVYKKIV
Sbjct: 932  MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
            N+ VAFLIL VDDILLIG +V  LTD+K+WL +Q+QMKDLGEAQY L IQIVRNRKN+TL
Sbjct: 992  NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            AMS+ASYI+K+LSRYKMQNSKKG LPFRHG+HLSK+QCPKTP+EVEDMR IPY+SA+ S+
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-------NGDLIL---NLILTGY 240
            MY MLCTR +ICY+VGIV+RYQSNPG DHW AVK IL       N  L+    +LILTGY
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            TD DFQ+DKD+RKSTSGS F LN GAVVWRS KQ CIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLR 1231

[Close]

BLAST of Tan0019987 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.6e-124
Identity = 233/318 (73.27%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 840  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 899

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
               VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDLGEAQY L IQI+R+RKN+TL
Sbjct: 900  KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 959

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 960  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 1019

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
            MY MLCTR +ICYAVGIV+RYQSNPGLDHW AVK +L       D +L     +LILTGY
Sbjct: 1020 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGY 1079

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            TD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 1080 TDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR 1139

[Close]

BLAST of Tan0019987 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.6e-124
Identity = 233/318 (73.27%), Postives = 259/318 (81.45%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 714  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 773

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
               VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDLGEAQY L IQI+R+RKN+TL
Sbjct: 774  KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 833

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 834  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 893

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
            MY MLCTR +ICYAVGIV+RYQSNPGLDHW AVK +L       D +L     +LILTGY
Sbjct: 894  MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGY 953

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            TD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 954  TDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR 1013

[Close]

BLAST of Tan0019987 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 1.1e-122
Identity = 231/318 (72.64%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 1   MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
           M QP+GFI Q QEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 1   MSQPEGFITQSQEQKVCKLNRSIYGSKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 60

Query: 61  NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
              VAFL+L VDDILLIG + G LTD+K WLA+Q+QMKDLGEAQY L IQI+R+RKN+TL
Sbjct: 61  KGKVAFLVLYVDDILLIGNDAGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTL 120

Query: 121 AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
           A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 121 ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 180

Query: 181 MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
           MY MLCTR +ICYAVGIV+RYQSNPGLDHW  VK IL       D +L     +LILTGY
Sbjct: 181 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKIILKYLRRTRDYMLVYGAKDLILTGY 240

Query: 241 TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
           TD DFQTDKDSRKSTSGS F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 241 TDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR 300

[Close]

BLAST of Tan0019987 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.1e-122
Identity = 230/318 (72.33%), Postives = 257/318 (80.82%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFI QGQEQ+VC               W  RFD AI SYGFDQNV+EPCVYKKI 
Sbjct: 840  MSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKIN 899

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
               VAFL+L VDDILLIG +VG LTD+K WLA+Q+QMKDLGE QY L IQI+R+RKN+TL
Sbjct: 900  KGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTL 959

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            A+S+A+YI+K+L RY MQNSKKGLLPFRHGVHLSK+Q PKTP+EVEDMRRIPYASA+ S+
Sbjct: 960  ALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSL 1019

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-----NGDLIL-----NLILTGY 240
            MY MLCTR +ICYAVGIV+RYQSNPGLDHW AVK IL       D +L     +LILTGY
Sbjct: 1020 MYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGY 1079

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            T+ DFQTDKDSRKSTS S F LN GAVVWRS KQGCIADSTMEAEYVAACEAAKEAVWL+
Sbjct: 1080 TNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLK 1139

[Close]

BLAST of Tan0019987 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 5.4e-122
Identity = 231/318 (72.64%), Postives = 260/318 (81.76%), Query Frame = 0


Query: 1    MDQPKGFIAQGQEQRVC---------------WLRRFDEAINSYGFDQNVNEPCVYKKIV 60
            M QP+GFIAQ QEQ+VC               W  RFD AI SYGF+QNV+EPCVYKKIV
Sbjct: 932  MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991

Query: 61   NNTVAFLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTL 120
            N+ VAFLIL VDDILLIG +V  LTD+K+WL +Q+QMKDLGEAQY L IQIVRNRKN+TL
Sbjct: 992  NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051

Query: 121  AMSKASYINKMLSRYKMQNSKKGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSM 180
            AMS+ASYI+K+LSRYKMQNSKKG LPFRHG+HLSK+QCPKTP+EVEDMR IPY+SA+ S+
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111

Query: 181  MYVMLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL-------NGDLIL---NLILTGY 240
            MY MLCTR +ICY+VGIV+RYQSNPG DHW AVK IL       N  L+    +LILTGY
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171

Query: 241  TDYDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVWLR 294
            TD DFQ+DKD+RKSTSGS F LN GAVVWRS KQ CIADSTMEAEYVAACEAAKEAVWLR
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLR 1231

[Close]

BLAST of Tan0019987 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-19
Identity = 73/277 (26.35%), Postives = 130/277 (46.93%), Query Frame = 0


Query: 18  WLRRFDEAINSYGFDQNVNEPCVYKKIVNNTVAFLILCVDDILLIGIEVGLLTDIKEWLA 77
           W  +F   +  +GF Q+ ++   + KI       +++ VDDI++       + ++K  L 
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLK 305

Query: 78  SQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKASYINKMLSRYKMQNSKKGLLPFRHGVH 137
           S ++++DLG  +Y L ++I R+     +   K  Y   +L    +   K   +P    V 
Sbjct: 306 SCFKLRDLGPLKYFLGLEIARSAAGINICQRK--YALDLLDETGLLGCKPSSVPMDPSVT 365

Query: 138 LSKDQCPKTPREVEDMRRIPYASAIRSMMYVMLCTRHNICYAVGIVTRYQSNPGLDHWAA 197
            S      +  +  D +   Y   I  +MY+ + TR +I +AV  ++++   P L H  A
Sbjct: 366 FS----AHSGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQA 425

Query: 198 VKAILN---GDLILNLI--------LTGYTDYDFQTDKDSRKSTSGSAFILNAGAVVWRS 257
           V  IL+   G +   L         L  ++D  FQ+ KD+R+ST+G    L    + W+S
Sbjct: 426 VMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 485

Query: 258 FKQGCIADSTMEAEYVAACEAAKEAVWLRKMMLDLEV 284
            KQ  ++ S+ EAEY A   A  E +WL +   +L++
Sbjct: 486 KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513

[Close]

BLAST of Tan0019987 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-13
Identity = 69/236 (29.24%), Postives = 107/236 (45.34%), Query Frame = 0


Query: 51  FLILCVDDILLIGIEVGLLTDIKEWLASQYQMKDLGEAQYTLSIQIVRNRKNRTLAMSKA 110
           +L+L VDDILL G    LL  +   L+S + MKDLG   Y L IQI  +     L +S+ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 111 SYINKMLSRYKMQNSK--KGLLPFRHGVHLSKDQCPKTPREVEDMRRIPYASAIRSMMYV 170
            Y  ++L+   M + K     LP +    +S  + P    +  D R     S + ++ Y+
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFR-----SIVGALQYL 121

Query: 171 MLCTRHNICYAVGIVTRYQSNPGLDHWAAVKAIL---NGDLILNLIL--------TGYTD 230
            L TR +I YAV IV +    P L  +  +K +L    G +   L +          + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 231 YDFQTDKDSRKSTSGSAFILNAGAVVWRSFKQGCIADSTMEAEYVAACEAAKEAVW 274
            D+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of Tan0019987 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.1e-59	40.39	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.8e-27	27.53	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	1.2e-20	41.35	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q94HW2	8.2e-19	27.51	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	4.4e-12	29.24	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Tan0019987 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	5.3e-124	73.27	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	5.3e-124	73.27	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0061170.1	2.2e-122	72.64	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	8.5e-122	72.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
ADJ18449.1	1.1e-121	72.64	gag/pol protein, partial [Bryonia dioica]	[more]

BLAST of Tan0019987 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	2.6e-124	73.27	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	2.6e-124	73.27	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7V1F5	1.1e-122	72.64	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G0044...	[more]
A0A5A7T2V9	4.1e-122	72.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
E2GK51	5.4e-122	72.64	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]

BLAST of Tan0019987 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.7e-19	26.35	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.1e-13	29.24	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 15..131 e-value: 1.5E-14 score: 54.2
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 11..206
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 213..291 e-value: 1.80565E-30 score: 109.865

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019987.1	Tan0019987.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding