Tan0019979 (gene) Snake gourd v1

Overview


Name	Tan0019979
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	E3 ubiquitin ligase BIG BROTHER
Location	LG06: 4388005 .. 4391498 (+)
RNA-Seq Expression	Tan0019979
Synteny	Tan0019979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATTGAAGAACAAAGGAAGAAAGAGAGCACAAACCCATTTCCCCATTTCCTTTCATTTTCATCTCTCTCTCTGCTAAAACTCTGCTAGAAATCAAGAGTTCTAGTGTGAGAGAGAGAAAAAAAGGTCCATCCTCCATTTCTCAAGCTTCTTCCCTTGTACCTCATTTCTCAAGCTATTTCTTTTCTTTTTCTTTTTTTTTGTTTGTTTCTTAAGTTTAGTAGAAGAATCCTTTTTTTTTTGTTTGTTCTGTTTTTATTGTGAATATTATGAGGATTCTAACGAATACTGGGATCTGTACCTGTTTATTTTTTGCTCATTTGTCTGCATTTATCTGAATCTTAGGATTCTCTTACATCTTTTGTGCTCATTTGTCTACATTTGTCGAATTCCTCAGGTTTTTCCTCTGTCAGAAGGCGAAGAGTTTTCTTGGGGGAGTTTCTGTTTGGTTGTCCAGAAAGGAAAATCATAGGATTTTGCATTGTTTTTTCTTTTTGGGGACAAAAGAAATTCAAATGTAAGTTTTTCTTTGGTTTTGTTTAATGTTATTGTATTTTTTTTTTCATTCTTTTTTCATTTAATGTTGTTGGTTGTTTTAGGGCCTATTTCCTATTTCATTGGAGCAGATAATTGTAAATCTGCTATAGCTCTCTCCTTTTTCCCCAAGTTTTCTCAGCAACCAAACAGATGGTTGTGGATAATGTAGGTTTCAAGTTCATTTCATGTTTTCTTTTTGTTTGATATGTTATTTTTTTTGTGTGTGTATTTGCAGTTAAATTTGCAAATTCTATTGTTGGTTTTTGGTTAAGATGAATGAGGATAGACAAATGGAACTACATTACGTCGATACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGACTTCTTTGAAGGGCTCCACCAACATCAAGTGCCTGCTTATGCCAATGCTGTGCCATTGCATGATCAGGTAACAAAGCAGCCATGAAAAACCGATGAATTTTTCGATAACGAATCCGAGTTTTGTTAGTTGAGAGAGTAATTAGTATTGGAAATGTTTGGTAATTTGTCTCTCAGGGAAATGCATACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCCGATCATGGGAATACGTATTATGGCCATTCAGAGGAAGGTCACCATTTACCACCTTCAATGGATGTTGGTGAAAGGGAATGGGAGTACCCTTCAACGGTGAATGTCGAAATTCCCGAACCGGCATATGCGCCATCCGTGGAAGAGGATGCTGTAGATGCTCATTCTATACCAGAAGAATGTAAGTGTTGACAAATCCTCTATGATACTGAATCTGTTTCTTTCATACTTTTGAAAGCTAATATAGAGTTTCTCGTGACCAAAACGTCGAGTGGAATTATTGAAAATGAAAAATAGTGGATCTTATCAGCATCTTTTACTTTGTTTCCTGTTTTGCAGGTGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTATGATGCTTTCTCCTTGATTCCTCTATGTGCCTCTTTTTCTGTTAGGACCATCATCTACTTAATGCCTTATATTAACTGTGGCTTATTCAAAAAGTTGTTCGGGATCGGTTTACGCTATGCATTTATTAATGAATTGGGTTATGACCTTTTTATTGTCAAAGGTCTTAGAATGTTCACATGTTATCAAACTGAAGTTATCATGTAGCTGATTGAATCTTTTCTCCTCAGGTTTCAGTTCCTCATTTCGAAATGTTTTCTTTCTAGATAGTTTTGTGCCCGACGAACTTTCGATGCTTTTGCACTATGAGAAAGGTACTTTTTCGGTTTGAAACTCATCGGATCCGTCTTCTTTTGTTTGTCTCTTCAGGTTGTATGGCAAGATGAGATAGATCCTGACCACATGACCTATGAGGTATGCTTTCAACTATATCATTTAGAAATAGAACCAGTTTTAGAACATGTTTTTAAAGATGTTCTGTAGATCTGCAATTGAGTGGCCTATAGAAGTTGAGGTTGTTGTACACTTGACACCGATGTTTTACCGAACCCGTGAATTTTTGCTTTAAGGAAAATGTTTTTTAGGCTCAATTTTCAACAAGCCCCTAGTTTCTTATGGTCATATAAACATAGTTGGTTGTCAAATAAGTGGGAACCATAGAAGTTTACTGTGTAACAAAGAAAAGAACAATGTGACTGTCTTTAGCCATGACTGGATTATCTTACATGGTTTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTATCCGAAGAACAAATAAGTTTGCTTCCGACTGCCCGATGCAAGTTAACGAGCTTTTTCTCGAGGAAAAAGCCAGATGAAAGGTATGGTTTTGACAGATGTTGCATTCGATTAATCTCGCTCGATGTTTGTTAATCTGCTTTAGTTGGAGGATATAGAAACTTCCTGTCAAAAGAGCTTAGAATGATCTACTGGCAAATGGTTCGGCGCCATTTTAAACGACACTCCCTATGAATTAGGATATACAACATTGTAACAAATAATGATGCTTGTTTCTGATATTTTTATTCTGAAATCAAATGGATCCATTTTTCCATCATACTATGCAAGTTAATTCAGTCTAATGAACCATTCTCTTCGATTTCTTCGGTTTTTAGTGTATCCACGTCGAACCTCTAACAAATGATACAAATGAGATGATCAAATAAGAAACGCTCTTTGAGTACGATCATGTTCTTGGAGTTGCATCTTAAGTTGCTGACTGTAGATCTCGGTACCTTCTCCGTATGGTATTTTCTCTTGGAATCTCGGTCCGATATTTGATTGTACTTGTTTTGTTTTGACGACAGATGTGTGATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATTAAATTGCCCTGCAAGCATTTCTACCACAACAAATGCATAACTAAATGGCTCACCATCAACAAAGTCAGTTAATTTCATCAACTTTTTCATGTCTTTACACTTCCACCGTTTCTGCTCTAACTTGCTTTTCGTCTTGCTCGTGTTTATCAGATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCGTCGGGCAGCGATAACCGGCAGTAGATTTTGGAACTCTAACATTTTGCTCCTCCCTGTTCATCTTTTCCCATTTTTGCCTTCTCACTTTCATTTCTCCTCCCATTTTGTACATCTCTACTTAACTAAGTTAATTAAGTACTCTAATCCTTAATCTCTCTCCCCACACTTGCCTTATGCTCGAAGGAAAAAAATTTGTACCCTTTTTAACTGTTTAGCCTGAAGATTGAAGTCTAGTTACTTTCTTAGATTAAGATTAGCTCGTTTTGCAGTCATTTTTCAAATGGGGTGGTTCGTGTTGAATTGCATTGAATGAGGATGTTCGTAGGTTGGGGTGAATTAGATTAGGTTAAGAGACGTCTTTAATCTGACCCAATTGTTCGAGTTGCAAATTAGTTCAATTGAAGTGAC

mRNA sequence

AACAAATTGAAGAACAAAGGAAGAAAGAGAGCACAAACCCATTTCCCCATTTCCTTTCATTTTCATCTCTCTCTCTGCTAAAACTCTGCTAGAAATCAAGAGTTCTAGTGTGAGAGAGAGAAAAAAAGGTTTTTCCTCTGTCAGAAGGCGAAGAGTTTTCTTGGGGGAGTTTCTGTTTGGTTGTCCAGAAAGGAAAATCATAGGATTTTGCATTGTTTTTTCTTTTTGGGGACAAAAGAAATTCAAATGGCCTATTTCCTATTTCATTGGAGCAGATAATTGTAAATCTGCTATAGCTCTCTCCTTTTTCCCCAAGTTTTCTCAGCAACCAAACAGATGGTTGTGGATAATATGAATGAGGATAGACAAATGGAACTACATTACGTCGATACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGACTTCTTTGAAGGGCTCCACCAACATCAAGTGCCTGCTTATGCCAATGCTGTGCCATTGCATGATCAGGGAAATGCATACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCCGATCATGGGAATACGTATTATGGCCATTCAGAGGAAGGTCACCATTTACCACCTTCAATGGATGTTGGTGAAAGGGAATGGGAGTACCCTTCAACGGTGAATGTCGAAATTCCCGAACCGGCATATGCGCCATCCGTGGAAGAGGATGCTGTAGATGCTCATTCTATACCAGAAGAATGTGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTGTATGGCAAGATGAGATAGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTATCCGAAGAACAAATAAGTTTGCTTCCGACTGCCCGATGCAAGTTAACGAGCTTTTTCTCGAGGAAAAAGCCAGATGAAAGATGTGTGATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATTAAATTGCCCTGCAAGCATTTCTACCACAACAAATGCATAACTAAATGGCTCACCATCAACAAAATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCGTCGGGCAGCGATAACCGGCAGTAGATTTTGGAACTCTAACATTTTGCTCCTCCCTGTTCATCTTTTCCCATTTTTGCCTTCTCACTTTCATTTCTCCTCCCATTTTGTACATCTCTACTTAACTAAGTTAATTAAGTACTCTAATCCTTAATCTCTCTCCCCACACTTGCCTTATGCTCGAAGGAAAAAAATTTGTACCCTTTTTAACTGTTTAGCCTGAAGATTGAAGTCTAGTTACTTTCTTAGATTAAGATTAGCTCGTTTTGCAGTCATTTTTCAAATGGGGTGGTTCGTGTTGAATTGCATTGAATGAGGATGTTCGTAGGTTGGGGTGAATTAGATTAGGTTAAGAGACGTCTTTAATCTGACCCAATTGTTCGAGTTGCAAATTAGTTCAATTGAAGTGAC

Coding sequence (CDS)

ATGGTTGTGGATAATATGAATGAGGATAGACAAATGGAACTACATTACGTCGATACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGACTTCTTTGAAGGGCTCCACCAACATCAAGTGCCTGCTTATGCCAATGCTGTGCCATTGCATGATCAGGGAAATGCATACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCCGATCATGGGAATACGTATTATGGCCATTCAGAGGAAGGTCACCATTTACCACCTTCAATGGATGTTGGTGAAAGGGAATGGGAGTACCCTTCAACGGTGAATGTCGAAATTCCCGAACCGGCATATGCGCCATCCGTGGAAGAGGATGCTGTAGATGCTCATTCTATACCAGAAGAATGTGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTGTATGGCAAGATGAGATAGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTATCCGAAGAACAAATAAGTTTGCTTCCGACTGCCCGATGCAAGTTAACGAGCTTTTTCTCGAGGAAAAAGCCAGATGAAAGATGTGTGATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATTAAATTGCCCTGCAAGCATTTCTACCACAACAAATGCATAACTAAATGGCTCACCATCAACAAAATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCGTCGGGCAGCGATAACCGGCAGTAG

Protein sequence

MVVDNMNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCYKFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYPSTVNVEIPEPAYAPSVEEDAVDAHSIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNASGSDNRQ

Homology

[Close]

BLAST of Tan0019979 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.0e-65
Identity = 127/249 (51.00%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 6   MNEDRQ--MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQ 65
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +H Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 66  CYKFGVSDHGN-TYYGHSEEGHHLPPSMDVGEREWEYPSTVNV-EIPEPAYAPSVEEDAV 125
            YKFG S   N ++YG  +   HL   M +G   W+Y   VNV + PE   A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 126 DAHSIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 185
           D HS  EEC ++++ +  + QV WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 186 PTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 245
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 246 NIEVFGDES 251
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]

BLAST of Tan0019979 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-26
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 135 QEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 194
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 195 KKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNAS 254
              +E CVIC++ Y+  +  I LPCKH YH++CI  WL INK+CP+C+ EV    ST+ S
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV----STSTS 338

Query: 255 G 256
           G
Sbjct: 345 G 338

[Close]

BLAST of Tan0019979 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.9e-14
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 149 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPDERCVICQMRY 208
           +D D+M+YEELL LGE +G  S GLSEE I  +       +S     +  E C +CQ  Y
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626

Query: 209 KRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 242
             GD    L C H +H  C+ +WL +  +CPIC
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNLCPIC 659

[Close]

BLAST of Tan0019979 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-13
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 149 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPDERCVICQMRY 208
           +D D+M+YEELL L E +G  S GLSEE+++ L   R   +        +E C ICQ  Y
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEY 627

Query: 209 KRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 242
             GD    L C H +H  C+ +WL +   CPIC
Sbjct: 628 VDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]

BLAST of Tan0019979 vs. ExPASy Swiss-Prot
Match: Q9ZQF9 (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.5e-13
Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 149 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT----SFFSRKKPDERCVIC 208
           +D D+M+YEELL LGE +G  S GLSEE I L    + K T    S     +  E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 209 QMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           Q  Y  GD    L C H +H  CI +W+ I  +CPIC  E
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]

BLAST of Tan0019979 vs. NCBI nr
Match: XP_038899262.1 (E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899263.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899264.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida])

HSP 1 Score: 507.3 bits (1305), Expect = 7.9e-140
Identity = 240/256 (93.75%), Postives = 246/256 (96.09%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQME+HY+DTGFPYTVTESFMDFFEGLHQHQVPAY NAVPL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYPSTV-NVEIPEPAYAPSVEEDAVDAH 125
           KFGVSDHGNTYYGHSEE HHLPPSMDVGEREWEYP++V NVEIPEP YAPSVEED VDAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSVANVEIPEPTYAPSVEEDVVDAH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           SIPEECDLSHQEETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           R KLTSFFSRKKP+ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RFKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASGSDNRQ 261
           VFGD S NASG+DNRQ
Sbjct: 241 VFGDGSMNASGNDNRQ 256

[Close]

BLAST of Tan0019979 vs. NCBI nr
Match: TYK10442.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 503.4 bits (1295), Expect = 1.1e-138
Identity = 239/254 (94.09%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAH 125
           KFGVSDHGNTYYGHSEE HHLPPSMDVGEREWEYP S VNVEIPEP+YAPSVEED VDAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           SIPEECDLSH+EETSTSQV+WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASGSDN 259
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Tan0019979 vs. NCBI nr
Match: XP_008461282.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_008461283.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.5e-138
Identity = 239/254 (94.09%), Postives = 243/254 (95.67%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAH 125
           KFGVSDHGNTYYGHSEE HHLPPSMDVGEREWEYP S VNVEIPEP+YAPSVEED VDAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           SIPEECDLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASGSDN 259
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Tan0019979 vs. NCBI nr
Match: XP_011659453.1 (E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >KAE8646405.1 hypothetical protein Csa_015770 [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 5.6e-138
Identity = 238/254 (93.70%), Postives = 243/254 (95.67%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAH 125
           KFGVSDHGNTYYGHSEE HHLPPSMDVGEREWEYP S +NVEIPEP+YAPSVEED VDAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           SIPEECDLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASGSDN 259
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Tan0019979 vs. NCBI nr
Match: XP_008461284.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 233/248 (93.95%), Postives = 237/248 (95.56%), Query Frame = 0


Query: 12  MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCYKFGVSD 71
           MELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 72  HGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAHSIPEEC 131
           HGNTYYGHSEE HHLPPSMDVGEREWEYP S VNVEIPEP+YAPSVEED VDAHSIPEEC
Sbjct: 61  HGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAHSIPEEC 120

Query: 132 DLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 191
           DLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS
Sbjct: 121 DLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 180

Query: 192 FFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDES 251
           FFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD S
Sbjct: 181 FFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 240

Query: 252 TNASGSDN 259
           TNAS SDN
Sbjct: 241 TNASASDN 248

[Close]

BLAST of Tan0019979 vs. ExPASy TrEMBL
Match: A0A5D3CGQ8 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00890 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.5e-139
Identity = 239/254 (94.09%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAH 125
           KFGVSDHGNTYYGHSEE HHLPPSMDVGEREWEYP S VNVEIPEP+YAPSVEED VDAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           SIPEECDLSH+EETSTSQV+WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASGSDN 259
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Tan0019979 vs. ExPASy TrEMBL
Match: A0A1S3CED1 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.2e-138
Identity = 239/254 (94.09%), Postives = 243/254 (95.67%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQMELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAH 125
           KFGVSDHGNTYYGHSEE HHLPPSMDVGEREWEYP S VNVEIPEP+YAPSVEED VDAH
Sbjct: 61  KFGVSDHGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           SIPEECDLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           RCKLTSFFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASGSDN 259
           VFGD STNAS SDN
Sbjct: 241 VFGDGSTNASASDN 254

[Close]

BLAST of Tan0019979 vs. ExPASy TrEMBL
Match: A0A1S3CES7 (E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.3e-135
Identity = 233/248 (93.95%), Postives = 237/248 (95.56%), Query Frame = 0


Query: 12  MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCYKFGVSD 71
           MELHY+DTGFPYT TESFMDFF+GLHQHQVPAY NAVPL DQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 72  HGNTYYGHSEEGHHLPPSMDVGEREWEYP-STVNVEIPEPAYAPSVEEDAVDAHSIPEEC 131
           HGNTYYGHSEE HHLPPSMDVGEREWEYP S VNVEIPEP+YAPSVEED VDAHSIPEEC
Sbjct: 61  HGNTYYGHSEESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAHSIPEEC 120

Query: 132 DLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 191
           DLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS
Sbjct: 121 DLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTS 180

Query: 192 FFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDES 251
           FFSRKK DERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGD S
Sbjct: 181 FFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDGS 240

Query: 252 TNASGSDN 259
           TNAS SDN
Sbjct: 241 TNASASDN 248

[Close]

BLAST of Tan0019979 vs. ExPASy TrEMBL
Match: A0A6J1D3R4 (E3 ubiquitin ligase BIG BROTHER OS=Momordica charantia OX=3673 GN=LOC111017324 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.2e-135
Identity = 233/257 (90.66%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 6   MNEDRQMELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQCY 65
           MNEDRQME+HY+DTGFPYT TESFMDFFEGLH HQVPAY NA PL DQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTTTESFMDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCY 60

Query: 66  KFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYPSTVNVEIPEPAYAPSVEEDAVDAHS 125
           KFGVSD GNTYYGHSEE HHLPPSMD+GER WEYPSTV VE PEP YAPSVEED VDAH 
Sbjct: 61  KFGVSDPGNTYYGHSEESHHLPPSMDIGERGWEYPSTVTVENPEPTYAPSVEEDVVDAHF 120

Query: 126 IP-EECDLSHQ-EETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 185
           IP EECD SHQ EETSTSQVVWQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLLPT
Sbjct: 121 IPEEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLLPT 180

Query: 186 ARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 245
           A+CKLTSFFSRKKP+ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI
Sbjct: 181 AKCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNI 240

Query: 246 EVFGDESTNASGSDNRQ 261
           EVFGDE  NASGSDNRQ
Sbjct: 241 EVFGDEGVNASGSDNRQ 257

[Close]

BLAST of Tan0019979 vs. ExPASy TrEMBL
Match: A0A6J1H8X1 (E3 ubiquitin ligase BIG BROTHER OS=Cucurbita moschata OX=3662 GN=LOC111460703 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 230/251 (91.63%), Postives = 239/251 (95.22%), Query Frame = 0


Query: 6   MNEDRQMELHYVD-TGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQC 65
           MNEDRQMELHY+D  GFPYTVTESFMDFFEGLHQHQVPAYANAVPL DQGNAYWSMNMQC
Sbjct: 1   MNEDRQMELHYLDGGGFPYTVTESFMDFFEGLHQHQVPAYANAVPLIDQGNAYWSMNMQC 60

Query: 66  YKFGVSDHGNTYYGHSEEGHHLPPSMDVGEREWEYPSTVNVEIPEPAYAPSVEEDAVDAH 125
           YKFGVSDHGNTYY   EE  HLPPS+DVGEREWEYPSTVNV++PEP YAPSVEED VD H
Sbjct: 61  YKFGVSDHGNTYYDPLEESRHLPPSVDVGEREWEYPSTVNVDVPEPTYAPSVEEDVVDTH 120

Query: 126 SIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 185
           S+PEECD+SHQEETSTSQ +WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA
Sbjct: 121 SMPEECDISHQEETSTSQAIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTA 180

Query: 186 RCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIE 245
           RCKLTSFFSRKKPDERCVICQMRYKRG+KQIKLPCKHFYHNKCITKWLTINKICPICNIE
Sbjct: 181 RCKLTSFFSRKKPDERCVICQMRYKRGEKQIKLPCKHFYHNKCITKWLTINKICPICNIE 240

Query: 246 VFGDESTNASG 256
           VFGDEST+ASG
Sbjct: 241 VFGDESTDASG 251

[Close]

BLAST of Tan0019979 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.1e-66
Identity = 127/249 (51.00%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 6   MNEDRQ--MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQ 65
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +H Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 66  CYKFGVSDHGN-TYYGHSEEGHHLPPSMDVGEREWEYPSTVNV-EIPEPAYAPSVEEDAV 125
            YKFG S   N ++YG  +   HL   M +G   W+Y   VNV + PE   A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 126 DAHSIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 185
           D HS  EEC ++++ +  + QV WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 186 PTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 245
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 246 NIEVFGDES 251
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]

BLAST of Tan0019979 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.1e-66
Identity = 127/249 (51.00%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 6   MNEDRQ--MELHYVDTGFPYTVTESFMDFFEGLHQHQVPAYANAVPLHDQGNAYWSMNMQ 65
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +H Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 66  CYKFGVSDHGN-TYYGHSEEGHHLPPSMDVGEREWEYPSTVNV-EIPEPAYAPSVEEDAV 125
            YKFG S   N ++YG  +   HL   M +G   W+Y   VNV + PE   A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 126 DAHSIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 185
           D HS  EEC ++++ +  + QV WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 186 PTARCKLTSFFSRKKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPIC 245
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INK+CP+C
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 240

Query: 246 NIEVFGDES 251
           N EVFG+ S
Sbjct: 241 NSEVFGEPS 246

[Close]

BLAST of Tan0019979 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-27
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 135 QEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 194
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 195 KKPDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVFGDESTNAS 254
              +E CVIC++ Y+  +  I LPCKH YH++CI  WL INK+CP+C+ EV    ST+ S
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEV----STSTS 338

Query: 255 G 256
           G
Sbjct: 345 G 338

[Close]

BLAST of Tan0019979 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-22
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 150 DPDHMTYEELLDLGESVGTESRGLSEEQISLLPTAR--CKLTSFF---SRKK---PDERC 209
           DP++MTYEEL +LG+SVG   +GLS+E+IS L T +   K  S++    +KK    D +C
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQC 234

Query: 210 VICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKICPICNIEVF 247
            IC M Y +GDK   LPCKH YH  CI++WL  NK+C IC  EV+
Sbjct: 235 SICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]

BLAST of Tan0019979 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.3e-20
Identity = 66/180 (36.67%), Postives = 99/180 (55.00%), Query Frame = 0


Query: 70  SDHGNTYYGHSEEGHHLPPSMDVGEREWEYPSTVNVEIPEPAY------APSVEEDAVDA 129
           +   N+++ H+   H   PSM +   E +  S    EI E  Y         V+ED ++ 
Sbjct: 32  ASQANSHFAHAM--HDSSPSM-ISMIESDEESEDEEEINENYYEYFDSNGFGVDEDEINE 91

Query: 130 HSIPEECDLSHQEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 189
               +E + + +EE    +   +DEIDPD ++YEEL+ LG+ +G E+RGL+  +IS    
Sbjct: 92  FLEDQESNSNLEEEDDFLEE--EDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLN 151

Query: 190 ARCKLTSFFSRKKPD-ERCVICQMRYKRGDKQIKL-PCKHFYHNKCITKWLTINKICPIC 242
           A    T  FS  K + +RCV+CQM ++  +  + L PC H YH++CITKWL   KICPIC
Sbjct: 152 AS---TYVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPIC 203

The following BLAST results are available for this feature:

BLAST of Tan0019979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L649	3.0e-65	51.00	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9LT17	3.5e-26	50.41	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
O49500	6.9e-14	40.86	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV...	[more]
Q7XTV7	4.5e-13	40.86	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9ZQF9	4.5e-13	44.00	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV...	[more]

BLAST of Tan0019979 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899262.1	7.9e-140	93.75	E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899263.1 E3 u...	[more]
TYK10442.1	1.1e-138	94.09	E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008461282.1	2.5e-138	94.09	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_0084612...	[more]
XP_011659453.1	5.6e-138	93.70	E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubi...	[more]
XP_008461284.1	1.3e-134	93.95	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo]	[more]

BLAST of Tan0019979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGQ8	5.5e-139	94.09	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CED1	1.2e-138	94.09	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A1S3CES7	6.3e-135	93.95	E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A6J1D3R4	8.2e-135	90.66	E3 ubiquitin ligase BIG BROTHER OS=Momordica charantia OX=3673 GN=LOC111017324 P...	[more]
A0A6J1H8X1	1.4e-134	91.63	E3 ubiquitin ligase BIG BROTHER OS=Cucurbita moschata OX=3662 GN=LOC111460703 PE...	[more]

BLAST of Tan0019979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63530.1	2.1e-66	51.00	RING/U-box superfamily protein	[more]
AT3G63530.2	2.1e-66	51.00	RING/U-box superfamily protein	[more]
AT3G19910.1	2.5e-27	50.41	RING/U-box superfamily protein	[more]
AT5G52140.1	5.4e-22	49.52	RING/U-box superfamily protein	[more]
AT3G47180.1	2.3e-20	36.67	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 201..241 e-value: 1.7E-4 score: 30.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 200..242 e-value: 1.5E-11 score: 44.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 201..242 score: 11.456568
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 163..246 e-value: 9.4E-18 score: 65.7
IPR033276	E3 ubiquitin-protein ligase BIG BROTHER	PANTHER	PTHR46400	RING/U-BOX SUPERFAMILY PROTEIN	coord: 6..251
None	No IPR available	PANTHER	PTHR46400:SF3	E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER	coord: 6..251
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 196..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019979.1	Tan0019979.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048437	floral organ development
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:1900057	positive regulation of leaf senescence
biological_process	GO:0051865	protein autoubiquitination
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity