Tan0019609 (gene) Snake gourd v1

Overview


Name	Tan0019609
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L22-2
Location	LG06: 6673075 .. 6674764 (-)
RNA-Seq Expression	Tan0019609
Synteny	Tan0019609

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATAGACCTATCTCCTTCGAGCTTTAAAAGACCAACTCATAACCCTAAAATCAGCGCCGATTGTTGTATACACATCTGCAGGAAATTAGGGCAACGAGTTGCAGAGCAGAAGCAAAAATGAGCCGTGGAGCAGCATCTGGTGGTCCGAAGGGGAAGAAGAAGGGAGTGACGTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCCTTAGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGATTCGGTTACCGTCACTCGGGACAAGAACAAGATCACCGTCAACTCCGATAGCAACTTCTCCAAGAGGTACCCATTGTTTCGTAGTTGTTGATTTTTGTATTATTCTGGATTTGAGAGGATGAATACGGTTCTGGATGACTTTTGTTCGTGTATTTGTCCATTTGTTTGGGAGTAAGCGTTGGATTGATCTGCTAGCTTCCGCGGTATTATTGACAACGCGGGTTGATTTTTGTTTTCTGTGATTTGTTGGGATTTTATTGGATTGTGTGATTGATGAACATTAGCGGGGTGTATTGCTCGAATAGATCTCGGGATTTCAGCCATGATTTAGGGTAAACGCAAGAAGTAGTCGTTATCTGATAATAGTTCTTCCTCTTCGTGCTAGATTCTGGATCTTCTATTTCGAATGAATTCTGATTTCTGGGTCGTTTTTATTTTCTCATTTGTGAAGTTCTTAAATCTGTAGACTTTGGGTATATTTTTTGTGTGTTGGATAACAGTAGGTCCTTATTTTGTTGAATTTTCTTTGGAATACACATCTGAATCTCTGGTCTATTGTAAGAGAGGGATTCATCAAGTATGTTACTTCAAGTATCAATCCCTTTTTTTCTCCCCTCCCCTTTTATGGTTGAACTTAGAATGTATGTGTAAATTTTGAAAGAAAGAAGCTGGTCGTTACTCTTAAGTTAGATTGTTTTTGTTGTAAACTAGGCCTGTAAACTCCAAATAAACTTTGCCGATTGTTCTCTCTTTTGAATCCCAGGTATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTCTATGAATTGAGATACTTCAACATTGCTGAGAACGAGGGCGAGGAAGAAGATTGAGGTTCAAGTCCTTTATTTTGGAAGCATCGTTTGCAGTAGGATTATTAGTTGTAGTGGCCTTTCTCATATTAAGGTTGTTGAAATTATCTCCATAGATTGTCTTGAAGCTTTCCATATAGATCAGCCAAGGCTTTGAGTTATGAGATGATGCAACTCTTGTTTACTTCTGAAGTTTTAATATCCATAAATTTTGTTCACGTAGCTCCTTTCTTTTGGTTGCTTTGAAGGTATTTTTATTGCTCTGAGGATATTGATGTTGTCTTAGAAAAATGATGTGTATTTGGTCTGATTTGATGGTTGTTATATTTGCATTCCTGTACTTTTTAACTACAAAAGTTAAACTTGCCCAATTGTTAAATTTGGCTTTGTTAATGTCATGGTGACATTGCAGGGAGATGCAATTCTGTGTTCAGTACCTTAAGAATTTTCAATTTTGTATCCAACACGGTCTAATTTGACATTTTTTTTTTAAAAAAATTCAGACTTATTAGATA

mRNA sequence

CTAAAATAGACCTATCTCCTTCGAGCTTTAAAAGACCAACTCATAACCCTAAAATCAGCGCCGATTGTTGTATACACATCTGCAGGAAATTAGGGCAACGAGTTGCAGAGCAGAAGCAAAAATGAGCCGTGGAGCAGCATCTGGTGGTCCGAAGGGGAAGAAGAAGGGAGTGACGTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCCTTAGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGATTCGGTTACCGTCACTCGGGACAAGAACAAGATCACCGTCAACTCCGATAGCAACTTCTCCAAGAGGTATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTCTATGAATTGAGATACTTCAACATTGCTGAGAACGAGGGCGAGGAAGAAGATTGAGGTTCAAGTCCTTTATTTTGGAAGCATCGTTTGCAGTAGGATTATTAGTTGTAGTGGCCTTTCTCATATTAAGGTTGTTGAAATTATCTCCATAGATTGTCTTGAAGCTTTCCATATAGATCAGCCAAGGCTTTGAGTTATGAGATGATGCAACTCTTGTTTACTTCTGAAGTTTTAATATCCATAAATTTTGTTCACGTAGCTCCTTTCTTTTGGTTGCTTTGAAGGTATTTTTATTGCTCTGAGGATATTGATGTTGTCTTAGAAAAATGATGTGTATTTGGTCTGATTTGATGGTTGTTATATTTGCATTCCTGTACTTTTTAACTACAAAAGTTAAACTTGCCCAATTGTTAAATTTGGCTTTGTTAATGTCATGGTGACATTGCAGGGAGATGCAATTCTGTGTTCAGTACCTTAAGAATTTTCAATTTTGTATCCAACACGGTCTAATTTGACATTTTTTTTTTAAAAAAATTCAGACTTATTAGATA

Coding sequence (CDS)

ATGAGCCGTGGAGCAGCATCTGGTGGTCCGAAGGGGAAGAAGAAGGGAGTGACGTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTCCTTAGAGAAGTTTCTTCTCGAGAGGATCAAGGTCGGCGGCAAAGCTGGGGCACTTGGTGATTCGGTTACCGTCACTCGGGACAAGAACAAGATCACCGTCAACTCCGATAGCAACTTCTCCAAGAGGTATCTTAAGTACTTGACTAAGAAGTATTTGAAGAAACACAATGTTAGAGATTGGCTTCGGGTTATTGCTTCGAACAAGGACCGCAACGTCTATGAATTGAGATACTTCAACATTGCTGAGAACGAGGGCGAGGAAGAAGATTGA

Protein sequence

MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED

Homology

[Close]

BLAST of Tan0019609 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.4e-52
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTV 60
           MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+
Sbjct: 1   MSRGGAAVA-KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTI 60

Query: 61  TRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120
           TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENE
Sbjct: 61  TREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE 120

Query: 121 GEEED 126
           GEEED
Sbjct: 121 GEEED 124

[Close]

BLAST of Tan0019609 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-51
Identity = 103/125 (82.40%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTV 60
           MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++
Sbjct: 1   MSRGNAAAA-KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSI 60

Query: 61  TRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120
           TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENE
Sbjct: 61  TREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE 120

Query: 121 GEEED 126
            EEED
Sbjct: 121 AEEED 124

[Close]

BLAST of Tan0019609 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-41
Identity = 86/122 (70.49%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 4   GAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRD 63
           GA S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR 
Sbjct: 5   GAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRY 64

Query: 64  KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEE 123
             KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I +     
Sbjct: 65  NGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASY 124

Query: 124 ED 126
           E+
Sbjct: 125 EE 126

[Close]

BLAST of Tan0019609 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 3.5e-32
Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 6   ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDK 65
           A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K
Sbjct: 9   AKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSK 68

Query: 66  NKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEE 125
           +KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++E EEE
Sbjct: 69  SKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEE 126

[Close]

BLAST of Tan0019609 vs. ExPASy Swiss-Prot
Match: Q98TF8 (60S ribosomal protein L22 OS=Gallus gallus OX=9031 GN=RPL22 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.1e-32
Identity = 77/126 (61.11%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VT 60
           + + AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT
Sbjct: 4   VKKPAAKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVT 63

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           + R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K+   YELRYF I ++
Sbjct: 64  IERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQD 123

Query: 121 EGEEED 126
           E EEE+
Sbjct: 124 EEEEEE 126

[Close]

BLAST of Tan0019609 vs. NCBI nr
Match: XP_004136027.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >XP_022155135.1 60S ribosomal protein L22-2 [Momordica charantia] >XP_038896853.1 60S ribosomal protein L22-2-like [Benincasa hispida] >KAA0067992.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa] >KGN44943.1 hypothetical protein Csa_015937 [Cucumis sativus] >TYK18135.1 60S ribosomal protein L22-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. NCBI nr
Match: XP_023548993.1 (60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. NCBI nr
Match: XP_022991268.1 (60S ribosomal protein L22-2-like [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 5.6e-59
Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. NCBI nr
Match: XP_022960081.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >KAG6593201.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237.7 bits (605), Expect = 5.6e-59
Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGSTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. NCBI nr
Match: XP_022953729.1 (60S ribosomal protein L22-2-like [Cucurbita moschata])

HSP 1 Score: 235.3 bits (599), Expect = 2.8e-58
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGCPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. ExPASy TrEMBL
Match: A0A5D3D2W6 (60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00650 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.5e-60
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. ExPASy TrEMBL
Match: A0A0A0K637 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.5e-60
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. ExPASy TrEMBL
Match: A0A6J1DLK6 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.5e-60
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. ExPASy TrEMBL
Match: A0A1S3BRQ9 (60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.5e-60
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. ExPASy TrEMBL
Match: A0A6J1JVR1 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.7e-59
Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MSRG-AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVT 60
           MSRG AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VT
Sbjct: 1   MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVT 60

Query: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAEN 120
           VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYEL+YFNIAEN
Sbjct: 61  VTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELKYFNIAEN 120

Query: 121 EGEEED 126
           EGEEED
Sbjct: 121 EGEEED 126

[Close]

BLAST of Tan0019609 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTV 60
           MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+
Sbjct: 1   MSRGGAAVA-KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTI 60

Query: 61  TRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120
           TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENE
Sbjct: 61  TREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE 120

Query: 121 GEEED 126
           GEEED
Sbjct: 121 GEEED 124

[Close]

BLAST of Tan0019609 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTV 60
           MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+
Sbjct: 1   MSRGGAAVA-KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTI 60

Query: 61  TRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120
           TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENE
Sbjct: 61  TREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE 120

Query: 121 GEEED 126
           GEEED
Sbjct: 121 GEEED 124

[Close]

BLAST of Tan0019609 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-53
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTV 60
           MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+
Sbjct: 1   MSRGGAAVA-KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTI 60

Query: 61  TRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120
           TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENE
Sbjct: 61  TREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE 120

Query: 121 GEEED 126
           GEEED
Sbjct: 121 GEEED 124

[Close]

BLAST of Tan0019609 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 202.6 bits (514), Expect = 1.9e-52
Identity = 103/125 (82.40%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MSRGAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTV 60
           MSRG A+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++
Sbjct: 1   MSRGNAAAA-KGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSI 60

Query: 61  TRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENE 120
           TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRVIA+NKDRN+YELRYFNIAENE
Sbjct: 61  TREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENE 120

Query: 121 GEEED 126
            EEED
Sbjct: 121 AEEED 124

[Close]

BLAST of Tan0019609 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-42
Identity = 86/122 (70.49%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 4   GAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRD 63
           GA S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR 
Sbjct: 5   GAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRY 64

Query: 64  KNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEE 123
             KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRVIASNKD+NVYE+RYF I +     
Sbjct: 65  NGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASY 124

Query: 124 ED 126
           E+
Sbjct: 125 EE 126

The following BLAST results are available for this feature:

BLAST of Tan0019609 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9W1	2.4e-52	84.00	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9FE58	2.6e-51	82.40	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9SRX7	1.9e-41	70.49	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
P47198	3.5e-32	63.64	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]
Q98TF8	6.1e-32	61.11	60S ribosomal protein L22 OS=Gallus gallus OX=9031 GN=RPL22 PE=2 SV=1	[more]

BLAST of Tan0019609 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136027.1	1.1e-59	99.21	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008451565.1 PREDICTED: 60S rib...	[more]
XP_023548993.1	2.5e-59	98.41	60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo] >KAG6575823.1 60S ...	[more]
XP_022991268.1	5.6e-59	97.62	60S ribosomal protein L22-2-like [Cucurbita maxima]	[more]
XP_022960081.1	5.6e-59	98.41	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_023004692.1 60S riboso...	[more]
XP_022953729.1	2.8e-58	97.62	60S ribosomal protein L22-2-like [Cucurbita moschata]	[more]

BLAST of Tan0019609 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2W6	5.5e-60	99.21	60S ribosomal protein L22-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0K637	5.5e-60	99.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397560 PE=3 SV=1	[more]
A0A6J1DLK6	5.5e-60	99.21	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111022271 PE=3 ...	[more]
A0A1S3BRQ9	5.5e-60	99.21	60S ribosomal protein L22-2 OS=Cucumis melo OX=3656 GN=LOC103492808 PE=3 SV=1	[more]
A0A6J1JVR1	2.7e-59	97.62	60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487969 PE=...	[more]

BLAST of Tan0019609 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05560.1	1.7e-53	84.00	Ribosomal L22e protein family	[more]
AT3G05560.2	1.7e-53	84.00	Ribosomal L22e protein family	[more]
AT3G05560.3	1.7e-53	84.00	Ribosomal L22e protein family	[more]
AT5G27770.1	1.9e-52	82.40	Ribosomal L22e protein family	[more]
AT1G02830.1	1.3e-42	70.49	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 6..125 e-value: 5.4E-57 score: 192.9
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 15..123 e-value: 2.9E-46 score: 156.3
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..125
None	No IPR available	PANTHER	PTHR10064:SF13	SUBFAMILY NOT NAMED	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019609.1	Tan0019609.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome