Tan0019603 (gene) Snake gourd v1

Overview


Name	Tan0019603
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	glycine-rich RNA-binding protein-like
Location	LG05: 16044031 .. 16046106 (-)
RNA-Seq Expression	Tan0019603
Synteny	Tan0019603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGCGGAGGATAAGATTTGGGGTGCATCCAAACAAGGCAGCAATCACACCGCCTTTTAGGTTAACCCTGATTGCAAATAAACCGCGTCGGTTCAATTGTAAGCGAACCCTGAAGGGTGAAACTAACCCTAGTTACATTCTCCACTCTATATAAGCAACCCATTGGTTCATCCCCATTTCATTGTGCCCTTCTTCAGAGTTGTGGGATTTGTATTGATCCCCTTTTTCTTTCAACCTTCCATTTTTCAAACCCTTTTCTAGGGTTAGGGTTTTCTTGATTCCATGGCCTCCTCGTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCCTGGGCCACTGATGGTATTACCTTAGAGAAGGCTTTCTCTCCCTTTGGCGAGATCATTGAAGCGAAGGTCCGTTTGTCATCGTCGAGATCTGGATTTGTTCCGAATCGGCTTTGTCGATCCTAAATCTGATCTGTGACTCTGTGACTCTCCTCTGTTTTGTGTTACTTTACTACTACTCTTGCTATGTTACTTTTATTACTCTCCTTTAATCGGTACGTTCACCTTCATCTTGTTTTCAGAGACGAAGAACGATTTTTTTTTTTTTTTTTTTTTTAAATTTTGGTTCGTGTCTGTTTTCATTGATCTGGTTCTGTGGCTGATCTTTTGTTTTTCCTTTTGATTCTGATTCAGATCGTCAACGACCGTGAAACCGGAAGATCGAGGGGTTTTGGATTCGTGACATTTGCTCATGAGGAGTCTATGAGAAGTGCTATTGAAGCGATGAACGGTCATAACCTTGACGGCCGAAGTATCACCGTCAACGAGGCTCAACAAAGAGGTGGTGGCGGCGGCGGTGGTGGTTACAACCGTGGTGGTGGTGGTGGAGGTGGAGGATATGGCGGAAGACGCGAAGGTGGTGGTGGTGGTGGTGGATACCGCGGAGGCGGTGGCTACGGTGGTGGTGGAGGCGGATACGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGATACGGCGGCGGCGGCGGCGATGGTGGCTCCCGTTACTCGAGCCGAGGCGGCGGTGGCGGATCTGAAGGAGGCTGGAGAAATTAGGCGGAGTTTTATGATTTAGTTTTTTGATTTTCCAAGTATTAGTGTGGTGGTGATAAAAAAAATCTTAGCAGCCTCTTTTCATTTCTGGTTTCTGTGACGCTTTTACTGTGTTCCGTTTGGGTGCTCTCTTTTTTGACCGATGACCGATGGGTTTCGTGTTCCTCATTATCTCGCTATATGTTACAACGAAAAAAAAACTTACATAAGAAAATGAAGTAGTAGTACAGCTCTTCGTTCTCACAAAAATTTCCATTTCTTTTGATCTTTCCTGTTATTCCATCTTTATTGTTGATTAATCATTCCGCCATAGCCAAGATTCTTCCCAAAAGGGAATACAAAAAAAGGCAAAATTCATTTCAAAGATATTTCCAAAGTCTCCATTACCGTAGACCTAATAATTGCTTTACTATTGTTTTATATCTCCTAAGGGAAATGGTTGGCTCTGGTTTCATTCTAATCCGATTGATGATAGCTGGACATAAAATATCATTGGAAATTCGAGATATTTTTTTAATGTGTCAGATATTTTTTGCAATGATTCGGGCTTTTTTAATTGGGCCCCCGGCGGGTCTTCCACCTCGGGTTGCGTAACGGACAAGTAGTCGTGGAATATTCGATGTTGGGGAAAGTATTTGTCGTTTTCTTGGAGCGTGAATATTGTGGGCCTGGGCTTCGAGAACTTCTCACATGGGCCTGTCGTTCTCGGCCTGCGTCATGTCTCGTATCTTAAAAAATCTTGCTTTTTTGCCAATAAACAATTCCGAGTGTTTTACGTAAAATTAAAAATCGTCTTCCAAGGTTTGCTTTTTTGGATGTGTTGGAAATGGAAATAGTTTTATACAAATGGTTGGCATAGAGATTAGATTCTATAGGGTTTTTAACGATTTGTTCATTATGGTATTAATTATACGCCTATTATGGGGATCAAGATTGAGTTAAAACTTAAAGTTGATTTTGCACAATTGGAATCATATAATTGTAAGTTGAT

mRNA sequence

CAAAAGCGGAGGATAAGATTTGGGGTGCATCCAAACAAGGCAGCAATCACACCGCCTTTTAGGTTAACCCTGATTGCAAATAAACCGCGTCGGTTCAATTGTAAGCGAACCCTGAAGGGTGAAACTAACCCTAGTTACATTCTCCACTCTATATAAGCAACCCATTGGTTCATCCCCATTTCATTGTGCCCTTCTTCAGAGTTGTGGGATTTGTATTGATCCCCTTTTTCTTTCAACCTTCCATTTTTCAAACCCTTTTCTAGGGTTAGGGTTTTCTTGATTCCATGGCCTCCTCGTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCCTGGGCCACTGATGGTATTACCTTAGAGAAGGCTTTCTCTCCCTTTGGCGAGATCATTGAAGCGAAGATCGTCAACGACCGTGAAACCGGAAGATCGAGGGGTTTTGGATTCGTGACATTTGCTCATGAGGAGTCTATGAGAAGTGCTATTGAAGCGATGAACGGTCATAACCTTGACGGCCGAAGTATCACCGTCAACGAGGCTCAACAAAGAGGTGGTGGCGGCGGCGGTGGTGGTTACAACCGTGGTGGTGGTGGTGGAGGTGGAGGATATGGCGGAAGACGCGAAGGTGGTGGTGGTGGTGGTGGATACCGCGGAGGCGGTGGCTACGGTGGTGGTGGAGGCGGATACGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGATACGGCGGCGGCGGCGGCGATGGTGGCTCCCGTTACTCGAGCCGAGGCGGCGGTGGCGGATCTGAAGGAGGCTGGAGAAATTAGGCGGAGTTTTATGATTTAGTTTTTTGATTTTCCAAGTATTAGTGTGGTGGTGATAAAAAAAATCTTAGCAGCCTCTTTTCATTTCTGGTTTCTGTGACGCTTTTACTGTGTTCCGTTTGGGTGCTCTCTTTTTTGACCGATGACCGATGGGTTTCGTGTTCCTCATTATCTCGCTATATGTTACAACGAAAAAAAAACTTACATAAGAAAATGAAGTAGTAGTACAGCTCTTCGTTCTCACAAAAATTTCCATTTCTTTTGATCTTTCCTGTTATTCCATCTTTATTGTTGATTAATCATTCCGCCATAGCCAAGATTCTTCCCAAAAGGGAATACAAAAAAAGGCAAAATTCATTTCAAAGATATTTCCAAAGTCTCCATTACCGTAGACCTAATAATTGCTTTACTATTGTTTTATATCTCCTAAGGGAAATGGTTGGCTCTGGTTTCATTCTAATCCGATTGATGATAGCTGGACATAAAATATCATTGGAAATTCGAGATATTTTTTTAATGTGTCAGATATTTTTTGCAATGATTCGGGCTTTTTTAATTGGGCCCCCGGCGGGTCTTCCACCTCGGGTTGCGTAACGGACAAGTAGTCGTGGAATATTCGATGTTGGGGAAAGTATTTGTCGTTTTCTTGGAGCGTGAATATTGTGGGCCTGGGCTTCGAGAACTTCTCACATGGGCCTGTCGTTCTCGGCCTGCGTCATGTCTCGTATCTTAAAAAATCTTGCTTTTTTGCCAATAAACAATTCCGAGTGTTTTACGTAAAATTAAAAATCGTCTTCCAAGGTTTGCTTTTTTGGATGTGTTGGAAATGGAAATAGTTTTATACAAATGGTTGGCATAGAGATTAGATTCTATAGGGTTTTTAACGATTTGTTCATTATGGTATTAATTATACGCCTATTATGGGGATCAAGATTGAGTTAAAACTTAAAGTTGATTTTGCACAATTGGAATCATATAATTGTAAGTTGAT

Coding sequence (CDS)

ATGGCCTCCTCGTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCCTGGGCCACTGATGGTATTACCTTAGAGAAGGCTTTCTCTCCCTTTGGCGAGATCATTGAAGCGAAGATCGTCAACGACCGTGAAACCGGAAGATCGAGGGGTTTTGGATTCGTGACATTTGCTCATGAGGAGTCTATGAGAAGTGCTATTGAAGCGATGAACGGTCATAACCTTGACGGCCGAAGTATCACCGTCAACGAGGCTCAACAAAGAGGTGGTGGCGGCGGCGGTGGTGGTTACAACCGTGGTGGTGGTGGTGGAGGTGGAGGATATGGCGGAAGACGCGAAGGTGGTGGTGGTGGTGGTGGATACCGCGGAGGCGGTGGCTACGGTGGTGGTGGAGGCGGATACGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGATACGGCGGCGGCGGCGGCGATGGTGGCTCCCGTTACTCGAGCCGAGGCGGCGGTGGCGGATCTGAAGGAGGCTGGAGAAATTAG

Protein sequence

MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEESMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGYRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGGSEGGWRN

Homology

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BLAST of Tan0019603 vs. ExPASy Swiss-Prot
Match: Q99070 (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.1e-35
Identity = 120/179 (67.04%), Postives = 136/179 (75.98%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MA++ VEYRCFVGGLAWAT+  TLE+AF+ FG++I++K++ DRETGRSRGFGFVTF+ E+
Sbjct: 1   MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQ 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREG--GGGGG 120
           SM  AIE MNG  LDGR+ITVN+AQ RGGGGGGGGY    GGGGGGYGGR  G  GGGGG
Sbjct: 61  SMLDAIENMNGKELDGRNITVNQAQSRGGGGGGGGY----GGGGGGYGGREGGGYGGGGG 120

Query: 121 GY----RGGGGYGGGGGGYGGGGYGGGR-DRGYGGGGGDGGSRYSSRGGGGGSEGGWRN 173
           GY     GGGGYGGGG G GGGGYGG     GYGGGGG GG+R       G S G WRN
Sbjct: 121 GYGGRREGGGGYGGGGYGGGGGGYGGREGGGGYGGGGGYGGNR-------GDSGGNWRN 168

[Close]

BLAST of Tan0019603 vs. ExPASy Swiss-Prot
Match: Q03878 (Glycine-rich RNA-binding protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 117/160 (73.12%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 4   SSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEESMR 63
           + VEYRCFVGGLAWAT+  +LE+AFS FG+I ++KI+NDRETGRSRGFGFVTF  E+SMR
Sbjct: 2   AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61

Query: 64  SAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGG--GGGGGYGGRREGGGGG--GG 123
            AIE MNG  LDGR+ITVNEAQ RG GGGGG    GGG  GGGGGYGGRREGGGGG  GG
Sbjct: 62  DAIEGMNGQELDGRNITVNEAQSRGSGGGGGRREGGGGGYGGGGGYGGRREGGGGGGYGG 121

Query: 124 YR--GGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRY 158
            R  GGGGYGGGGGGYGG   GG  D GYGGGG  GGSR+
Sbjct: 122 RREGGGGGYGGGGGGYGGRREGG--DGGYGGGG--GGSRW 157

[Close]

BLAST of Tan0019603 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 8.3e-32
Identity = 124/179 (69.27%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MAS  VEYRCFVGGLAWATD  +LE AFS FGE++++KI+NDRETGRSRGFGFVTF  E+
Sbjct: 1   MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGG---GGGGYGGRREGGGGG 120
           SM+ AIE MNG +LDGRSITVNEAQ RG G GGGG  RGGGG   GGGGYGG   GGG G
Sbjct: 61  SMKDAIEGMNGQDLDGRSITVNEAQSRGSGAGGGG--RGGGGGYRGGGGYGG--GGGGYG 120

Query: 121 GGYRGGGGYGGGGGGY-----GGGGYGGGRDRGYGG-GGGDGGSRYSSRGGGGGSEGGW 171
           GG R GGGY GGGGGY     GGGGYGGG  R  GG GGG+GG      G GGG  GGW
Sbjct: 121 GGRREGGGYSGGGGGYSSRGGGGGGYGGGGRRDGGGYGGGEGG------GYGGGGGGGW 169

[Close]

BLAST of Tan0019603 vs. ExPASy Swiss-Prot
Match: Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 116/175 (66.29%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MAS  VEYRCFVGGLAWATD   LE AF+ +G++I++KI+NDRETGRSRGFGFVTF  E+
Sbjct: 1   MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGG----GGGGGY-GGRREGGG 120
           +M+ AIE MNG +LDGRSITVNEAQ RG GGGGG    GGG    GGGGGY GG    GG
Sbjct: 61  AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG 120

Query: 121 GGGGYRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGG 166
           GGG   GGGGY GGGGGY     GGG YGGGR  G GG GG  G  Y   GGGGG
Sbjct: 121 GGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGGGG 175

[Close]

BLAST of Tan0019603 vs. ExPASy Swiss-Prot
Match: Q05966 (Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.1e-31
Identity = 119/172 (69.19%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 4   SSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEESMR 63
           S VEYRCFVGGLAWAT    LE+ FS FGE+I++KI+NDRETGRSRGFGFVTF  E+SM+
Sbjct: 2   SEVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMK 61

Query: 64  SAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGG----GGGGYGGRREGGGGGGG 123
            AI+ MNG  LDGR+ITVNEAQ RGGGGGGG   RGGGG    GGGGYGG   GGGG G 
Sbjct: 62  DAIDEMNGKELDGRTITVNEAQSRGGGGGGG---RGGGGYGGRGGGGYGG---GGGGYGD 121

Query: 124 YRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGG--DGGSRYSSRGGGGGSEGG 170
            RGGGGYG GGGG GGGGYG G   GYGGGGG  DGG      GG GG  GG
Sbjct: 122 RRGGGGYGSGGGGRGGGGYGSG-GGGYGGGGGRRDGGGYGGGDGGYGGGSGG 166

[Close]

BLAST of Tan0019603 vs. NCBI nr
Match: XP_038901242.1 (glycine-rich RNA-binding protein-like [Benincasa hispida])

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-57
Identity = 155/172 (90.12%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVE+RCFVGGLAWATD I LEKAFSPFG+I+EAKIVNDRETGRSRGFGFVTFA EE
Sbjct: 1   MASSSVEFRCFVGGLAWATDNIALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEE 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           +MRSAIEAMNG NLDGRSITVNEAQQRGGGGGGGGYNR GGGGGGGYGGRREGGGGGG  
Sbjct: 61  AMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR-GGGGGGGYGGRREGGGGGGYN 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGGSEGGWRN 173
           RG GGY  GGGGYGGGGYGGGRDR YGGGGGDGGSRYS  GGGGGSEGGWRN
Sbjct: 121 RGSGGY--GGGGYGGGGYGGGRDRSYGGGGGDGGSRYSRGGGGGGSEGGWRN 169

[Close]

BLAST of Tan0019603 vs. NCBI nr
Match: KAG6571119.1 (hypothetical protein SDJN03_30034, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.9 bits (585), Expect = 1.6e-56
Identity = 158/174 (90.80%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  E+
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVEED 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           SMRSAIEAMNG NLDGRSITVNEAQQR GGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY
Sbjct: 61  SMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120

Query: 121 -RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYS-SRGGGGGSEGGWRN 173
            RGGGGYGGGGGGYGGGGYGGGRDRGY GGGGDGGSRY+   GGGGGSEGGWRN
Sbjct: 121 NRGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYNRGGGGGGGSEGGWRN 172

[Close]

BLAST of Tan0019603 vs. NCBI nr
Match: XP_022943401.1 (glycine-rich RNA-binding protein-like [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55
Identity = 156/175 (89.14%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  E+
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVEED 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           SMRSAIEAMNG NLDGRSITVNEAQQR GGGGGGGYNRGGGGGGGGYGGRREGGGGGG  
Sbjct: 61  SMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYNRGGGGGGGGYGGRREGGGGGGYN 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYS---SRGGGGGSEGGWRN 173
           RGGGGYGGGGGGYGGGGYGGGRDRGY GGGGDGGSRY+     GGGGGSEGGWRN
Sbjct: 121 RGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYNRGGGGGGGGGSEGGWRN 173

[Close]

BLAST of Tan0019603 vs. NCBI nr
Match: XP_023533100.1 (glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533101.1 glycine-rich RNA-binding protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.6e-54
Identity = 153/172 (88.95%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  EE
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEE 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           +MRSAIEAMNG NLDGRSITVNEAQQRGGGGGGGGYNR GGGGGGGYGGRREGGGGG   
Sbjct: 61  AMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR-GGGGGGGYGGRREGGGGGYN- 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGGSEGGWRN 173
           RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGG      GGGGGSEGGWRN
Sbjct: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGRYQRGGGGGGGSEGGWRN 170

[Close]

BLAST of Tan0019603 vs. NCBI nr
Match: KAG6605080.1 (hypothetical protein SDJN03_02397, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-53
Identity = 155/174 (89.08%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  EE
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEE 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           +MRSAIEAMNG NLDGRSITVNEAQQRGGGGGGGGYNR GGGGGGGYGGRREGGGGG   
Sbjct: 61  AMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR-GGGGGGGYGGRREGGGGGYN- 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRY--SSRGGGGGSEGGWRN 173
           RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGG RY     GGGGGSEGGWRN
Sbjct: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGG-RYQRGGGGGGGGSEGGWRN 171

[Close]

BLAST of Tan0019603 vs. ExPASy TrEMBL
Match: A0A6J1FRL7 (glycine-rich RNA-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448177 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.6e-56
Identity = 156/175 (89.14%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  E+
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVEED 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           SMRSAIEAMNG NLDGRSITVNEAQQR GGGGGGGYNRGGGGGGGGYGGRREGGGGGG  
Sbjct: 61  SMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYNRGGGGGGGGYGGRREGGGGGGYN 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYS---SRGGGGGSEGGWRN 173
           RGGGGYGGGGGGYGGGGYGGGRDRGY GGGGDGGSRY+     GGGGGSEGGWRN
Sbjct: 121 RGGGGYGGGGGGYGGGGYGGGRDRGY-GGGGDGGSRYNRGGGGGGGGGSEGGWRN 173

[Close]

BLAST of Tan0019603 vs. ExPASy TrEMBL
Match: A0A6J1G631 (glycine-rich RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451139 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.4e-53
Identity = 153/173 (88.44%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  EE
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEE 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           +MRSAIEAMNG NLDGRSITVNEAQQRGGGGGGGGYNR GGGGGGGYGGRREGGGGG   
Sbjct: 61  AMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR-GGGGGGGYGGRREGGGGGYN- 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYS-SRGGGGGSEGGWRN 173
           RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGG  G RY    GGGGGSEGGWRN
Sbjct: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN 171

[Close]

BLAST of Tan0019603 vs. ExPASy TrEMBL
Match: A0A6J1L652 (glycine-rich RNA-binding protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499534 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.9e-53
Identity = 154/175 (88.00%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  EE
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEE 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQR-GGGGGGGGYNRGGGGGGGGYGGRREGGGGGGG 120
           +MRSAIEAMNG NLDGRSITVNEAQQR GGGGGGGGYNR GGGGGGGYGGRREGGGGGG 
Sbjct: 61  AMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGGYNR-GGGGGGGYGGRREGGGGGGY 120

Query: 121 YRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGDGGSRYS-SRGGGGGSEGGWRN 173
            RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGG  G RY    GGGGGSEGGWRN
Sbjct: 121 NRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN 174

[Close]

BLAST of Tan0019603 vs. ExPASy TrEMBL
Match: A0A6J1JGK0 (glycine-rich RNA-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484309 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.5e-52
Identity = 155/176 (88.07%), Postives = 158/176 (89.77%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFS FGEI+EAKIVNDRETGRSRGFGFVTF  E+
Sbjct: 1   MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVEED 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNR--GGGGGGGGYGGRREGGGGGG 120
           SMRSAIEAMNG NLDGRSITVNEAQQR GGGGGGGYNR  GGGGGGGGYGGRREGGGGG 
Sbjct: 61  SMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGYNRGGGGGGGGGGYGGRREGGGGGY 120

Query: 121 GYRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGGSEGGWRN 173
             RGGGGY  GGGGGGYGGGGYGGGRDRGY  GGGDGGSRY +RGGGGGSEGGWRN
Sbjct: 121 N-RGGGGYGSGGGGGGYGGGGYGGGRDRGY--GGGDGGSRY-NRGGGGGSEGGWRN 171

[Close]

BLAST of Tan0019603 vs. ExPASy TrEMBL
Match: A0A1S3CE16 (glycine-rich RNA-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103499671 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 147/173 (84.97%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MASSSVEYRCFVGGLAWATD   LEKAFSPFG+I+EAKIV+DRETGRSRGFGFVTF+ E+
Sbjct: 1   MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVSDRETGRSRGFGFVTFSEED 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           +MRSAIEAMNGH LDGR+ITVNEAQQRGGGGGGGG  R  GGGGGGYGGRR+GGGGGG  
Sbjct: 61  AMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGGGYR--GGGGGGYGGRRDGGGGGGFS 120

Query: 121 RGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGGSEGGWRN 173
           RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGG GG R +  GGGGGSEGGWRN
Sbjct: 121 RGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGYGGGRDNRGGGGGGSEGGWRN 171

[Close]

BLAST of Tan0019603 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 137.9 bits (346), Expect = 7.7e-33
Identity = 116/175 (66.29%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MAS  VEYRCFVGGLAWATD   LE AF+ +G++I++KI+NDRETGRSRGFGFVTF  E+
Sbjct: 1   MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGG----GGGGGY-GGRREGGG 120
           +M+ AIE MNG +LDGRSITVNEAQ RG GGGGG    GGG    GGGGGY GG    GG
Sbjct: 61  AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG 120

Query: 121 GGGGYRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGG 166
           GGG   GGGGY GGGGGY     GGG YGGGR  G GG GG  G  Y   GGGGG
Sbjct: 121 GGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGGGG 175

[Close]

BLAST of Tan0019603 vs. TAIR 10
Match: AT2G21660.2 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 131.3 bits (329), Expect = 7.2e-31
Identity = 113/165 (68.48%), Postives = 125/165 (75.76%), Query Frame = 0


Query: 1   MASSSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEE 60
           MAS  VEYRCFVGGLAWATD   LE AF+ +G++I++KI+NDRETGRSRGFGFVTF  E+
Sbjct: 1   MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  SMRSAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGY 120
           +M+ AIE MNG +LDGRSITVNEAQ RG GGGGG  +RGGG  GGG GGRREGGGG  G 
Sbjct: 61  AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGG--HRGGGSYGGG-GGRREGGGGYSG- 120

Query: 121 RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGG 166
            GGGGY   GG  GGG YGGGR  G GG GG  G  Y   GGGGG
Sbjct: 121 -GGGGYSSRGG--GGGSYGGGRREGGGGYGGGEGGGYGGSGGGGG 158

[Close]

BLAST of Tan0019603 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-28
Identity = 113/175 (64.57%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 4   SSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEESMR 63
           S VEYRCFVGGLAWAT+   L++ FS FG++I++KI+NDRE+GRSRGFGFVTF  E++MR
Sbjct: 2   SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61

Query: 64  SAIEAMNGHNLDGRSITVNEAQQRGGGGG-------GGGYNRGGGGGGGGYGGRREGGGG 123
            AIE MNG  LDGR ITVNEAQ RG GGG       GGGY  GGGGG  G GG    GGG
Sbjct: 62  DAIEEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGG 121

Query: 124 GGGY-RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSSRGGGGGSEGGW 171
           GGGY R  GGYG GGGG G G  GGGR  G G GGGDGGS      GGGG  GGW
Sbjct: 122 GGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSY-----GGGG--GGW 169

[Close]

BLAST of Tan0019603 vs. TAIR 10
Match: AT4G39260.2 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 91/138 (65.94%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 4   SSVEYRCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEESMR 63
           S VEYRCFVGGLAWAT+   L++ FS FG++I++KI+NDRE+GRSRGFGFVTF  E++MR
Sbjct: 2   SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61

Query: 64  SAIEAMNGHNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGYRGG 123
            AIE MNG  LDGR ITVNEAQ RG GGGGG    G GG GGGY       GGGGGY   
Sbjct: 62  DAIEEMNGKELDGRVITVNEAQSRGSGGGGG----GRGGSGGGY-----RSGGGGGYS-- 121

Query: 124 GGYGGGGGGYGGGGYGGG 142
              GGGGGGY GGG GGG
Sbjct: 122 ---GGGGGGYSGGGGGGG 125

[Close]

BLAST of Tan0019603 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 91/171 (53.22%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 9   RCFVGGLAWATDGITLEKAFSPFGEIIEAKIVNDRETGRSRGFGFVTFAHEESMRSAIEA 68
           + F+GG+A++ D  +L +AF+ +GE+++ +++ DRETGRSRGFGFVTF   E+  SAI+A
Sbjct: 41  KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100

Query: 69  MNGHNLDGRSITVNEAQQR--GGGGGGGGYNRGGGGGGGGYGGRREGGGGGGGYRGGGGY 128
           ++G +L GR + VN A  R  GGG GGGGY    GGGGGGYGG    GGG GGY G GGY
Sbjct: 101 LDGRDLHGRVVKVNYANDRTSGGGFGGGGY----GGGGGGYGGSGGYGGGAGGYGGSGGY 160

Query: 129 GGGGGGYG---GGGYGGGRDRGYGGGGGDG----GSRYSSRGGGGGSEGGW 171
           GGG GGYG   GGGYGG    GYGG G  G     + +   GGG GS GG+
Sbjct: 161 GGGAGGYGGNSGGGYGGNAAGGYGGSGAGGYGGDATGHGGAGGGYGSSGGF 207

The following BLAST results are available for this feature:

BLAST of Tan0019603 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99070	8.1e-35	67.04	Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1	[more]
Q03878	1.2e-33	73.13	Glycine-rich RNA-binding protein OS=Daucus carota OX=4039 PE=2 SV=1	[more]
P49311	8.3e-32	69.27	Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]
Q03250	1.1e-31	66.29	Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ...	[more]
Q05966	7.1e-31	69.19	Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=3708 GN=GRP10 PE=2 SV=1	[more]

BLAST of Tan0019603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901242.1	1.9e-57	90.12	glycine-rich RNA-binding protein-like [Benincasa hispida]	[more]
KAG6571119.1	1.6e-56	90.80	hypothetical protein SDJN03_30034, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022943401.1	1.4e-55	89.14	glycine-rich RNA-binding protein-like [Cucurbita moschata]	[more]
XP_023533100.1	2.6e-54	88.95	glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] ...	[more]
KAG6605080.1	1.7e-53	89.08	hypothetical protein SDJN03_02397, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0019603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRL7	6.6e-56	89.14	glycine-rich RNA-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1G631	1.4e-53	88.44	glycine-rich RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1L652	8.9e-53	88.00	glycine-rich RNA-binding protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1JGK0	7.5e-52	88.07	glycine-rich RNA-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC11148430...	[more]
A0A1S3CE16	1.3e-51	84.97	glycine-rich RNA-binding protein 1-like OS=Cucumis melo OX=3656 GN=LOC103499671 ...	[more]

BLAST of Tan0019603 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21660.1	7.7e-33	66.29	cold, circadian rhythm, and rna binding 2	[more]
AT2G21660.2	7.2e-31	68.48	cold, circadian rhythm, and rna binding 2	[more]
AT4G39260.1	5.7e-28	64.57	cold, circadian rhythm, and RNA binding 1	[more]
AT4G39260.2	1.7e-27	65.94	cold, circadian rhythm, and RNA binding 1	[more]
AT5G61030.1	1.8e-18	53.22	glycine-rich RNA-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 9..82 e-value: 8.7E-28 score: 108.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 11..79 e-value: 1.6E-21 score: 75.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 8..86 score: 19.041388
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..109 e-value: 3.7E-30 score: 106.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..172
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 1..171
None	No IPR available	PANTHER	PTHR48024:SF22	RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED	coord: 1..171
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 8..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019603.1	Tan0019603.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006858	extracellular transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:1990428	miRNA transport
biological_process	GO:0050688	regulation of defense response to virus
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0030126	COPI vesicle coat
molecular_function	GO:0035198	miRNA binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003727	single-stranded RNA binding
molecular_function	GO:0035197	siRNA binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0003676	nucleic acid binding