Tan0019581 (gene) Snake gourd v1

Overview
NameTan0019581
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionmitochondrial import receptor subunit TOM9-2-like
LocationLG06: 75757119 .. 75758630 (+)
RNA-Seq ExpressionTan0019581
SyntenyTan0019581
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTCGGGGTAATAAGCGGCCTTCTATCACCAATGGCGATGAGAATTTAGGCGTCCTGTCTAGGGTTTCCCGCTCCGTCGCTGATTCCCAAATCGTCCGGCGGGCGAAAAGCACAGCTTCCGACGCCGCGTTCGTTACCCAAAAGCTCCTCCGTAGCACCGGCAAAGCTGCGTGGATTGCAGGGACGACTTTTCTCATATTGGTGGTACCGCTCATCATTGAAATGGATCGTGAACAGCAGTTCAATGAGCTCGAGATGCAGCAGGCCAGTCTACTTGGTACTCCGGCCACCGCTGCTCCTAAATGATTTACTTGATGGCTTCAGGTTAAGGCTACTCCATGATGTTATTGCTGTTTAGGGTTTTTATGGGTTTTGGATCGAATTTGATTGCGGAATGTGGATGGATTGCGTACAATGTCGTACCTCTGTTCCTTTGTTGTGACTGCCGATTAGATGTGATGTGACGTTGCTCGGCTTTAGAGATTGGGGTTTTAGAGAGTTAGAATTATGTGGCAAAGTTATATGAATTGAATTCAGAATCAATTGAAATTTTCTTCTTCTCGTAAAACTCTGGATTGATGTTGTAAACTTATTTTATATTTGTTTCCTTTTTGTGAGAAATCGTTTCATGCCCAGAAATCATCAGCGAAAAAGAAAATCACCGACAGTTTTTTCTAGCTCCCCGAATTGATTGTTTTGCTTCATTAATCTCCTTTCATGAACTGGTGTTGTTGTGGATTGTGTTAGATGCTGCATCTATAGAATGGAGCTACAGATTGATTGGCCATTTTGGTGTTTTATAAAGTTCTTATGATATTAATTTCAGGTACCTAATCATTTGATATTTAAAGTTACTTGGGTCTTTGGTAATGACCTGTGCAGTTTCAAGTTATTGACTGCATTTTAGGGCAATTATCTATCTGCTGATTTCTCAATTAATATTACGAACTTAACGATGGAATGTGTCAAAGCTAAGAAAATAAAGTTCATTTGGTTGCTTGAGTTTGGAGTTATTATTTTCCCCTCATATATAGGCAATTGAGTTCTTTTCGTTAGAAGTTGGCTTAAAATTAACAGACAACAGCTTTTGGATTCCTCTCCTTACTAGGTACTCAACAACAAATCCTTCCTGTTTGTTTAATTCTTAGTCTCTGATTGTCACTTCCCTCGCTTAATATGTTTCACAAATCCTTCCTGTTTGTTTAATTCTTAGTCTCTGATTGTCACTTCCCTCGCTTAATATGTTTCACAGTTTTCACTGTTGGAGTCTACTTTCTATCTATGATTTTGTTGTTTTATCTGGAGGACTTAGAAAAAATTGACTTTCTAAAATTATGGTAACTCTGGATGTCAGAACATGGACCATATTTCTTTGTTCAACTCTGATAATCCATAAATGTTGACTGACTGTACTGTAGACAGGAAGACCAGTTTTTTCTGGCAGAGTTCTGTTGTGCAGCTGTTTCCCTTTCTTTATTACCTTATGCAATTTCTAGTCTCCTTTAG

mRNA sequence

ATGGCGTCTCGGGGTAATAAGCGGCCTTCTATCACCAATGGCGATGAGAATTTAGGCGTCCTGTCTAGGGTTTCCCGCTCCGTCGCTGATTCCCAAATCGTCCGGCGGGCGAAAAGCACAGCTTCCGACGCCGCGTTCGTTACCCAAAAGCTCCTCCGTAGCACCGGCAAAGCTGCGTGGATTGCAGGGACGACTTTTCTCATATTGGTGGTACCGCTCATCATTGAAATGGATCGTGAACAGCAGTTCAATGAGCTCGAGATGCAGCAGGCCAGTCTACTTGAGTTAGAATTATGTGGCAAAGTACCTAATCATTTGATATTTAAAGAAGACCAGTTTTTTCTGGCAGAGTTCTGTTGTGCAGCTGTTTCCCTTTCTTTATTACCTTATGCAATTTCTAGTCTCCTTTAG

Coding sequence (CDS)

ATGGCGTCTCGGGGTAATAAGCGGCCTTCTATCACCAATGGCGATGAGAATTTAGGCGTCCTGTCTAGGGTTTCCCGCTCCGTCGCTGATTCCCAAATCGTCCGGCGGGCGAAAAGCACAGCTTCCGACGCCGCGTTCGTTACCCAAAAGCTCCTCCGTAGCACCGGCAAAGCTGCGTGGATTGCAGGGACGACTTTTCTCATATTGGTGGTACCGCTCATCATTGAAATGGATCGTGAACAGCAGTTCAATGAGCTCGAGATGCAGCAGGCCAGTCTACTTGAGTTAGAATTATGTGGCAAAGTACCTAATCATTTGATATTTAAAGAAGACCAGTTTTTTCTGGCAGAGTTCTGTTGTGCAGCTGTTTCCCTTTCTTTATTACCTTATGCAATTTCTAGTCTCCTTTAG

Protein sequence

MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAWIAGTTFLILVVPLIIEMDREQQFNELEMQQASLLELELCGKVPNHLIFKEDQFFLAEFCCAAVSLSLLPYAISSLL
Homology
BLAST of Tan0019581 vs. ExPASy Swiss-Prot
Match: Q9FNC9 (Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana OX=3702 GN=TOM9-2 PE=1 SV=3)

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-19
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0

Query: 14 GDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAWIAGTTFLILVVPL 73
          GD N  +L+R+S    +S+IV + +  A DA  V++KLLRSTGKAAWIAGTTFLILVVPL
Sbjct: 14 GDPN--ILARIS----NSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVPL 73

Query: 74 IIEMDREQQFNELEMQQASLL 95
          IIEMDRE Q NE+E+QQASLL
Sbjct: 74 IIEMDREAQINEIELQQASLL 88

BLAST of Tan0019581 vs. ExPASy Swiss-Prot
Match: O64497 (Mitochondrial import receptor subunit TOM9-1 OS=Arabidopsis thaliana OX=3702 GN=TOM9-1 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 37/73 (50.68%), Postives = 56/73 (76.71%), Query Frame = 0

Query: 22 SRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAWIAGTTFLILVVPLIIEMDREQ 81
          S +   +++  IV + +  A DA +V++KLL+STGKAAWIAGTTFLIL VPLI+E++++ 
Sbjct: 13 SSILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLILAVPLILELEQDH 72

Query: 82 QFNELEMQQASLL 95
          +  E++ +QASLL
Sbjct: 73 RLGEIDFEQASLL 85

BLAST of Tan0019581 vs. NCBI nr
Match: XP_038875758.1 (mitochondrial import receptor subunit TOM9-2-like [Benincasa hispida])

HSP 1 Score: 171.8 bits (434), Expect = 4.1e-39
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
          MASRGNKRPSITNGD+NLGVLSRVSRSV+DSQIVRRAKSTASDAAFVTQKLLRSTGKAAW
Sbjct: 1  MASRGNKRPSITNGDDNLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60

Query: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
          IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 94

BLAST of Tan0019581 vs. NCBI nr
Match: XP_023006088.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita maxima])

HSP 1 Score: 171.0 bits (432), Expect = 7.0e-39
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1   MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
           MASRGNKRPSIT+GDENLGVLSRVSRSV+DSQIVRRAKSTASDAAFVTQKLLRSTGKAAW
Sbjct: 48  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 107

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 108 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 141

BLAST of Tan0019581 vs. NCBI nr
Match: XP_022959104.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita moschata])

HSP 1 Score: 171.0 bits (432), Expect = 7.0e-39
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1   MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
           MASRGNKRPSIT+GDENLGVLSRVSRSV+DSQIVRRAKSTASDAAFVTQKLLRSTGKAAW
Sbjct: 43  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 102

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 103 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 136

BLAST of Tan0019581 vs. NCBI nr
Match: XP_023548768.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita pepo subsp. pepo] >KAG6574890.1 Mitochondrial import receptor subunit TOM9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013462.1 Mitochondrial import receptor subunit TOM9-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.0 bits (432), Expect = 7.0e-39
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
          MASRGNKRPSIT+GDENLGVLSRVSRSV+DSQIVRRAKSTASDAAFVTQKLLRSTGKAAW
Sbjct: 1  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60

Query: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
          IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 94

BLAST of Tan0019581 vs. NCBI nr
Match: XP_023514145.1 (mitochondrial import receptor subunit TOM9-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-38
Identity = 90/94 (95.74%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
          MASRGNKRPSITNGD+NLGVLSRVSRSV+DSQIV+RAKSTASDAAFV+QKLLRSTGKAAW
Sbjct: 1  MASRGNKRPSITNGDDNLGVLSRVSRSVSDSQIVQRAKSTASDAAFVSQKLLRSTGKAAW 60

Query: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
          IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 94

BLAST of Tan0019581 vs. ExPASy TrEMBL
Match: A0A6J1L3Y9 (mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111498936 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1   MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
           MASRGNKRPSIT+GDENLGVLSRVSRSV+DSQIVRRAKSTASDAAFVTQKLLRSTGKAAW
Sbjct: 48  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 107

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 108 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 141

BLAST of Tan0019581 vs. ExPASy TrEMBL
Match: A0A6J1H712 (mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita moschata OX=3662 GN=LOC111460199 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1   MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
           MASRGNKRPSIT+GDENLGVLSRVSRSV+DSQIVRRAKSTASDAAFVTQKLLRSTGKAAW
Sbjct: 43  MASRGNKRPSITDGDENLGVLSRVSRSVSDSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 102

Query: 61  IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
           IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 103 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 136

BLAST of Tan0019581 vs. ExPASy TrEMBL
Match: A0A5D3CY80 (Mitochondrial import receptor subunit TOM9-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00090 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 89/94 (94.68%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
          MASRGNKRPSITNGD+NLG+LSRVSRSV+DSQIVRRAKSTASDAAFV++KLLRSTGKAAW
Sbjct: 1  MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
          IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 94

BLAST of Tan0019581 vs. ExPASy TrEMBL
Match: A0A0A0LNL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171830 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 89/94 (94.68%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
          MASRGNKRPSITNGD+NLG+LSRVSRSV+DSQIVRRAKSTASDAAFV++KLLRSTGKAAW
Sbjct: 1  MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
          IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 94

BLAST of Tan0019581 vs. ExPASy TrEMBL
Match: A0A1S3CDH3 (mitochondrial import receptor subunit TOM9-2-like OS=Cucumis melo OX=3656 GN=LOC103499459 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.2e-38
Identity = 89/94 (94.68%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASRGNKRPSITNGDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAW 60
          MASRGNKRPSITNGD+NLG+LSRVSRSV+DSQIVRRAKSTASDAAFV++KLLRSTGKAAW
Sbjct: 1  MASRGNKRPSITNGDDNLGILSRVSRSVSDSQIVRRAKSTASDAAFVSKKLLRSTGKAAW 60

Query: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 95
          IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL
Sbjct: 61 IAGTTFLILVVPLIIEMDREQQFNELEMQQASLL 94

BLAST of Tan0019581 vs. TAIR 10
Match: AT5G43970.1 (translocase of outer membrane 22-V )

HSP 1 Score: 94.7 bits (234), Expect = 5.9e-20
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0

Query: 14 GDENLGVLSRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAWIAGTTFLILVVPL 73
          GD N  +L+R+S    +S+IV + +  A DA  V++KLLRSTGKAAWIAGTTFLILVVPL
Sbjct: 14 GDPN--ILARIS----NSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVPL 73

Query: 74 IIEMDREQQFNELEMQQASLL 95
          IIEMDRE Q NE+E+QQASLL
Sbjct: 74 IIEMDREAQINEIELQQASLL 88

BLAST of Tan0019581 vs. TAIR 10
Match: AT1G04070.1 (translocase of outer membrane 22-I )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 37/73 (50.68%), Postives = 56/73 (76.71%), Query Frame = 0

Query: 22 SRVSRSVADSQIVRRAKSTASDAAFVTQKLLRSTGKAAWIAGTTFLILVVPLIIEMDREQ 81
          S +   +++  IV + +  A DA +V++KLL+STGKAAWIAGTTFLIL VPLI+E++++ 
Sbjct: 13 SSILAKISNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLILAVPLILELEQDH 72

Query: 82 QFNELEMQQASLL 95
          +  E++ +QASLL
Sbjct: 73 RLGEIDFEQASLL 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FNC98.4e-1966.67Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
O644971.8e-1350.68Mitochondrial import receptor subunit TOM9-1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
XP_038875758.14.1e-3997.87mitochondrial import receptor subunit TOM9-2-like [Benincasa hispida][more]
XP_023006088.17.0e-3997.87mitochondrial import receptor subunit TOM9-2-like [Cucurbita maxima][more]
XP_022959104.17.0e-3997.87mitochondrial import receptor subunit TOM9-2-like [Cucurbita moschata][more]
XP_023548768.17.0e-3997.87mitochondrial import receptor subunit TOM9-2-like [Cucurbita pepo subsp. pepo] >... [more]
XP_023514145.13.5e-3895.74mitochondrial import receptor subunit TOM9-2-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1L3Y93.4e-3997.87mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1H7123.4e-3997.87mitochondrial import receptor subunit TOM9-2-like OS=Cucurbita moschata OX=3662 ... [more]
A0A5D3CY802.2e-3894.68Mitochondrial import receptor subunit TOM9-2-like OS=Cucumis melo var. makuwa OX... [more]
A0A0A0LNL32.2e-3894.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171830 PE=3 SV=1[more]
A0A1S3CDH32.2e-3894.68mitochondrial import receptor subunit TOM9-2-like OS=Cucumis melo OX=3656 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT5G43970.15.9e-2066.67translocase of outer membrane 22-V [more]
AT1G04070.11.3e-1450.68translocase of outer membrane 22-I [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005683Mitochondrial import receptor subunit Tom22PFAMPF04281Tom22coord: 38..90
e-value: 1.7E-7
score: 31.1
IPR017411Mitochondrial outer membrane translocase complex, subunit Tom22, plantPANTHERPTHR46867MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM9-2coord: 1..94
NoneNo IPR availablePANTHERPTHR46867:SF6MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM9-2-LIKEcoord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0019581.1Tan0019581.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005741 mitochondrial outer membrane