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Tan0019539 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG ATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP Homology
BLAST of Tan0019539 vs. NCBI nr
Match: QHE65624.1 (ORF43m [Nitraria roborowskii] >QHE65704.1 ORF43m [Nitraria sibirica] >QHE65784.1 ORF43m [Nitraria tangutorum] >QHE65637.1 ORF43m [Nitraria roborowskii] >QHE65717.1 ORF43m [Nitraria sibirica]) HSP 1 Score: 174.1 bits (440), Expect = 5.0e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Tan0019539 vs. NCBI nr
Match: ERM97427.1 (hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]) HSP 1 Score: 172.2 bits (435), Expect = 1.9e-39 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Tan0019539 vs. NCBI nr
Match: KAB8477470.1 (hypothetical protein FH972_025336 [Carpinus fangiana]) HSP 1 Score: 166.8 bits (421), Expect = 8.0e-38 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Tan0019539 vs. NCBI nr
Match: YP_009758287.1 (hypothetical protein [Rubus amabilis] >YP_009758301.1 ORF43m [Rubus amabilis] >QIN90067.1 hypothetical protein [Rubus amabilis] >QIN90081.1 ORF43m [Rubus amabilis]) HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Tan0019539 vs. NCBI nr
Match: PQP98136.1 (hypothetical protein Pyn_20559 [Prunus yedoensis var. nudiflora] >QCE13753.1 hypothetical protein DEO72_LG11g751 [Vigna unguiculata]) HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of Tan0019539 vs. ExPASy TrEMBL
Match: A0A6B9QFK3 (ORF43m OS=Nitraria tangutorum OX=357929 GN=trnA-UGC PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Tan0019539 vs. ExPASy TrEMBL
Match: A0A6B9QF48 (ORF43m OS=Nitraria roborowskii OX=357932 GN=trnA-UGC PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Tan0019539 vs. ExPASy TrEMBL
Match: A0A6B9QGL2 (ORF43m OS=Nitraria sibirica OX=357931 GN=trnA-UGC PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Tan0019539 vs. ExPASy TrEMBL
Match: U5CKY2 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s02909p00006680 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.2e-40 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Tan0019539 vs. ExPASy TrEMBL
Match: A0A5N6L147 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025336 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.9e-38 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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