Tan0019507 (gene) Snake gourd v1

Overview
NameTan0019507
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description40S ribosomal protein S25
LocationLG04: 6104342 .. 6106589 (-)
RNA-Seq ExpressionTan0019507
SyntenyTan0019507
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAAGCCCATTTATTGCAACTCCCAAACCCTAGCAAGGACAGTGAGGTTTTAATTCCCTATCGTATCAATTCCTACCGAAGTTCCCTGAGTGTTGCTCGCGCTGTCTTCTGCACTTTCTTCTACAGGTAGCTCAGAACCCGACGGCGGTGGAACTTTGATAAGATGGTGCGTAATCGGTCTTACTTTTTTTTTTTGTTCCTGAATTCTGTCTGTAGGCGACAAAGAATTTGTAATCGGCGGGAAATCTGAAGCTGTCTGTATTGATTATATGTTTGAATGAACTTTTATAGTTCTTTGGTTCTCATATTTCATCAGAATCCCGACGAGAAAAGATCTTGTTTATTTTTCTGTTTTTGTGTACTTGCAATTTGGTCTCTTACTATGGTGGATTTGGTGTATTTAGGCGCCGAAGAAGGATAAGGCTCCTCCACCGGCCTCGAAGCCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGGTCAGATTATTTAAGTTCATGGCTATATTATTGTAGTTGAATTTGGCTATTCTTTTTTGGGTTTATTTATAATCTTATGATGGTCCTAATATCTTCCTGAACTGTCTGCCGTGGATTATTGTTTTAAGCTCATCAACGATTCTACGATGCGTTATGGGAAAAGCGTTTCTAACACTTGTACTCAATATTGTTCGTTTCTAACTTTATGAGGACAATGAGGAAACATCGAAATAACTAAGGAGCTCATGGGCAACATGAACTTGTAATTTAGTAATTGTGATATCAGGAAAGAATATCTCGTGCTGTTTCTATTGCTATCCTGACAGCTGTAAAATTTTGATTCCAATTGCTAAGATTATGCAGTTTTCTTGTTTATAATTCATGTTTGTCGTTGTTCGTACAACAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCAAAGTACAAGCTCGTCACTCCTTCAATCTTGTCCGATAGGTTGAGGGTACGTTTTCCGACCTCTTTAAATTTATAACGTGGAACATGTTTCATGGTTTGTTTGGCTTGCATATTCTATCACATTTATATTATTCTTGTCAATTTGTCATGCATGTTTCTGATATGAAAAATATCCATCATTTTTCATCCAAAACTATGTTTAAATTATCCATTTGATCCAATTCAATCTATCCGTTCGGTTTTGTCATTATGAAGGAAAGTGCCAGTATAATTTATTAAAACATCTCCCCTCCCCCTCTTCCCTTTAATTTGTAGATTCTTGTTTTGCTGAAATCTTTATGCATATGGTTTTCTTTTTAGTTTCTCAAAAATCAACTGGTGACTAGGTTGGGACATTGTTAATGAACAGTGGGCCTTTCTGAATAAGAGGATGAATAAACATTAGGTTCCAATTCCTAATTCAGAAGTTGAGAAAGCATGGACCGAATCATGGACTGAAGCCCAAATTCCTGTTGACAACCTATCTTAGGATATCAGATACCTAATGATTTATTAGACTAATGAAGTTCCATAACTCAATGTCAATTCTATCAATACATAAAGACCTAAGATTATTATTATTTTTTAGTTCAACAACATGTGATGACTTGGTCGAAGATGTAATGCCATAACCCGGTTAACTGTTCTCAGGCTTAAGATTCTTTTGTGTGAGAAAAACCAAAATGAACCTTAGATCCTAAGGTCCTCTGCATTCTTTTATTTCTTTTTGGAACATGCTGGTTGCAGCCAACCACTATTTACCATCATTGTTTTGGAGCATTCTTTTCTTTTTGTTATTTGACAAATGATTCTCTGCCATTGCGGTTTTTTAGATCAATGGATCTCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAGAGGTCTCATCAGAATGGTCTCTGCACACGCCAGCCAGGAGATCTACACAAGGGCCACCAATACCTAATTCCCTTTCTTATCTTTAGAGTTGAGTTGTCATGAATTAGCCTCATTACTCCAGTTTTTTCTTGGTTCCAATGTCTCCTCACATGGATGCTATAATTTTGCAATTTTTTTCTAGTTTTTTATTTTGGAGAGAAAATATCTGTTGTTATTTTCTTGTCAATTACTATTTTTATATTTATCAAGTTTCCCAGACTATTTATCAGTGCTTTCATTTAAGGTGAACATCGGTCAGCCGGTATCGATTTTTAGCTCAAACCTCCTACCTATTCGAAAATATTTGGAACTATT

mRNA sequence

ATCAAGCCCATTTATTGCAACTCCCAAACCCTAGCAAGGACAGTGAGGTTTTAATTCCCTATCGTATCAATTCCTACCGAAGTTCCCTGAGTGTTGCTCGCGCTGTCTTCTGCACTTTCTTCTACAGGTAGCTCAGAACCCGACGGCGGTGGAACTTTGATAAGATGGCGCCGAAGAAGGATAAGGCTCCTCCACCGGCCTCGAAGCCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCAAAGTACAAGCTCGTCACTCCTTCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAGAGGTCTCATCAGAATGGTCTCTGCACACGCCAGCCAGGAGATCTACACAAGGGCCACCAATACCTAATTCCCTTTCTTATCTTTAGAGTTGAGTTGTCATGAATTAGCCTCATTACTCCAGTTTTTTCTTGGTTCCAATGTCTCCTCACATGGATGCTATAATTTTGCAATTTTTTTCTAGTTTTTTATTTTGGAGAGAAAATATCTGTTGTTATTTTCTTGTCAATTACTATTTTTATATTTATCAAGTTTCCCAGACTATTTATCAGTGCTTTCATTTAAGGTGAACATCGGTCAGCCGGTATCGATTTTTAGCTCAAACCTCCTACCTATTCGAAAATATTTGGAACTATT

Coding sequence (CDS)

ATGGCGCCGAAGAAGGATAAGGCTCCTCCACCGGCCTCGAAGCCTGCTAAATCTGGCGGAGGGAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCAAAGTACAAGCTCGTCACTCCTTCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTAGCACGAAGAGCAATCAAGGATCTGATGGCCAGAGGTCTCATCAGAATGGTCTCTGCACACGCCAGCCAGGAGATCTACACAAGGGCCACCAATACCTAA

Protein sequence

MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Homology
[Close]
BLAST of Tan0019507 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.5e-47
Identity = 96/108 (88.89%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-45
Identity = 93/108 (86.11%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-44
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKK +APPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPS+LSDRLRI+GSLAR+AI+DLMARG IRMVSAHASQ+IYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-44
Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G IRMVSAH+SQ+IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Tan0019507 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-42
Identity = 89/106 (83.96%), Postives = 98/106 (92.45%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRAT 107
           +TPSILSDRLRINGSLAR+AI+DLM +G IRMVS H+SQ+I TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]
BLAST of Tan0019507 vs. NCBI nr
Match: XP_022150617.1 (40S ribosomal protein S25-2-like [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. NCBI nr
Match: XP_016900931.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_038878537.1 40S ribosomal protein S25-2 [Benincasa hispida] >TYK10188.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 5.0e-48
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. NCBI nr
Match: XP_022961406.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S ribosomal protein S25-2-like [Cucurbita maxima] >XP_023545343.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo] >KAG6590412.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023962.1 40S ribosomal protein S25-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHGSQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. NCBI nr
Match: XP_022945101.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S ribosomal protein S25-2 [Cucurbita maxima] >XP_023541368.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo] >KAG7012952.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 2.5e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. NCBI nr
Match: KAG6573888.1 (40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.7 bits (504), Expect = 2.5e-47
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 75  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 134

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 135 VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 182

[Close]
BLAST of Tan0019507 vs. ExPASy TrEMBL
Match: A0A6J1DB76 (40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111018712 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy TrEMBL
Match: A0A5D3CG38 (40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003330 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.4e-48
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy TrEMBL
Match: A0A1S4DY71 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103492227 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.4e-48
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy TrEMBL
Match: A0A6J1HUK6 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467942 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHGSQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. ExPASy TrEMBL
Match: A0A6J1HAA0 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111461987 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-48
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHGSQEIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 187.6 bits (475), Expect = 5.3e-48
Identity = 96/108 (88.89%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-46
Identity = 93/108 (86.11%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Tan0019507 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 181.8 bits (460), Expect = 2.9e-46
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]
BLAST of Tan0019507 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-45
Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G IRMVSAH+SQ+IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Tan0019507 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 177.2 bits (448), Expect = 7.2e-45
Identity = 92/108 (85.19%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK PPP+SKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:
BLAST of Tan0019507 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIK27.5e-4788.8940S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1[more]
Q9T0291.9e-4586.1140S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1[more]
P463011.2e-4487.0440S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1[more]
Q8GYL51.6e-4486.9240S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2[more]
Q9SIW52.5e-4283.9640S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3[more]
BLAST of Tan0019507 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150617.12.2e-48100.0040S ribosomal protein S25-2-like [Momordica charantia][more]
XP_016900931.15.0e-4899.07PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_038878537.1 40S r... [more]
XP_022961406.11.5e-4798.1540S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S riboso... [more]
XP_022945101.12.5e-4797.2240S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S riboso... [more]
KAG6573888.12.5e-4797.2240S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Tan0019507 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DB761.1e-48100.0040S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111018712 PE=3 SV... [more]
A0A5D3CG382.4e-4899.0740S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S4DY712.4e-4899.0740S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103492227 PE=3 SV=1[more]
A0A6J1HUK67.1e-4898.1540S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467942 PE=3 SV=1[more]
A0A6J1HAA07.1e-4898.1540S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111461987 PE=3 SV=... [more]
BLAST of Tan0019507 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21580.15.3e-4888.89Ribosomal protein S25 family protein [more]
AT4G39200.11.3e-4686.11Ribosomal protein S25 family protein [more]
AT2G21580.22.9e-4687.96Ribosomal protein S25 family protein [more]
AT4G34555.11.1e-4586.92Ribosomal protein S25 family protein [more]
AT4G39200.27.2e-4585.19Ribosomal protein S25 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 7..105
e-value: 5.1E-42
score: 142.2
IPR004977Ribosomal protein S25PANTHERPTHR1285040S RIBOSOMAL PROTEIN S25coord: 2..108
NoneNo IPR availableGENE3D3.30.63.20coord: 21..108
e-value: 1.2E-40
score: 139.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR12850:SF31BNAA04G12260D PROTEINcoord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0019507.1Tan0019507.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome