Tan0019413 (gene) Snake gourd v1

Overview


Name	Tan0019413
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Casparian strip membrane protein 1
Location	LG08: 68316675 .. 68318623 (-)
RNA-Seq Expression	Tan0019413
Synteny	Tan0019413

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATTCTCTCTTTGATTTCCCAGCTCACAATATGAAGAACTCCGGCGATTCGACCGTCATCGACGTGCCCCCGACCGCAGGCAGCAGCAAAAAGAAAGCGATTGCTTCCCGGCAAGAGAATGCCGGTGGCGGGTTGAAGCGGGGGCTCGCCGTGTTCGACTTCGTTCTCAGGCTTGGCGCTTTGGGCGCTGCCTTGGCTGCAGCTGCGGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAATTTGAAGCTAGCTATGATGATCTTCCCACTTTTCAGTAAGCGATCCTCAAAACTTACAATTTGGTCGTTATGATTTAGACTTAGTTTTTAATTTGAGTGTTATACCTTAATTTTTTTTTATTCTTTACGTCTTTTTATAACTATTTAATTTTTAGTTTTTAAATTTATTTTTGTAATTTTGTTTAGAATACAAATATTTTCTTAAGAAAAATGAAATCCATAATATAAAGAAATGTTGAGCAAAAATAAGTACCATTTTAAAAAATAAAAATTAAAAATCAAATGATTATCAAACGGGAACATATATTTCTAGAGTTGCTTGAGGCACTAAGTAAATTATAAAAATACGGGTTATAACAGTTTGTGGGCTATAATAGTTTGTGTGTTTGGAATGTAAAGTATTCCACAAGTTATTATAATACAAGTCTGAGATTTAGAGTATTCCACAAGTTATTATAATACAAAACTTATGCCTTAAACAGTTCCTTAAGATTTTGATTAAATTTTAATTCAATTTTTAATAATCATAAAGGTTTCATTAAGTGTTTATAATTTAGATATGTTTATTGGTCATTACCATAAATTAAATTATAACGACGAAATTGATTAAAACTCTTAATGAAGTTTATATATAGAGATTAAAATAGAAAATTAAGGTCTTATTTGATAACTAGTTTTTGACTTTTTATTTTTTTGAAAATTGTGCTTGTTTTTCTTTATCACAGTTTCCATCTTATTTTTCTTAAGAAAATACTTGAATTCTAAAAAAAAAAAAAAAAGTTTTGAAAACTATTTTTTTAATTTTCAAAATTATTTGACTTGGTTTTTGAAAACACATTTTAAAAGTAGATAAGAAACCCATAACAAACTATACGTAGGAGTAATATTTATATAGGCTTAATAATTATCCAACCACAGACATAAAAGTTTTGATTCTAGATTTTAAATTTGTAATTAACTTTATGACCTTTCGTTTTAAAGATAGGAGTATAAAGAAAAGATTAAATTTATCTATAACTTAAAACTTTTAAGATTAATATTTATTTAACGCATGGAATTTATATACAAATTAAACATCCTACATTAGATCTTCTATAATATCATTTTTTATAAAAGTTTATTGTATCTTCTTAAAAAGTTAAGATTATAAGTAGATAAAAAAAATGAATGAAATGATTAAATTATCGTAACCTATGAATTTAAACTTTGGAATGTTTTCACCTTTCATGCAGATTCTTCTTGATAGCGATGGGAATCATTGCAGGTTACATAGTTCTCTCGCTTCCATTCTCCATCGTCTGCATAGTCCGCCCGACTGCGGTCGGGATCCGATTGCTCCTCCTCATCCTCGACACCGTAAACTCCGATCAAAATCAAATCATTAAACATTATTCAACCACTTTATTTTTCTCCCTTTTTCATCTTCAATGAAATAAATTTGATATAAGGTTTACAATATGCATTTGCAGGTGGCTCTCACATTGGCCACGTCGGCCGCCGCGGCCGCCGCGGCCATAGTGTATCTGGCCCACAGCGGCAACTCCGACACCAACTGGCTGGCGATCTGCGACCAGTTCGGCGATTTCTGCCAGAAAGTTAGCGGCGCGGTGGTTGGCTCCTTCGTTGCCGTTGTTCTGATTATGTTCCTTATCTTGTTGTCCGCTTTCGCCATCAGAAACACTCACTAA

mRNA sequence

ACAAATTCTCTCTTTGATTTCCCAGCTCACAATATGAAGAACTCCGGCGATTCGACCGTCATCGACGTGCCCCCGACCGCAGGCAGCAGCAAAAAGAAAGCGATTGCTTCCCGGCAAGAGAATGCCGGTGGCGGGTTGAAGCGGGGGCTCGCCGTGTTCGACTTCGTTCTCAGGCTTGGCGCTTTGGGCGCTGCCTTGGCTGCAGCTGCGGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAATTTGAAGCTAGCTATGATGATCTTCCCACTTTTCAATTCTTCTTGATAGCGATGGGAATCATTGCAGGTTACATAGTTCTCTCGCTTCCATTCTCCATCGTCTGCATAGTCCGCCCGACTGCGGTCGGGATCCGATTGCTCCTCCTCATCCTCGACACCGTGGCTCTCACATTGGCCACGTCGGCCGCCGCGGCCGCCGCGGCCATAGTGTATCTGGCCCACAGCGGCAACTCCGACACCAACTGGCTGGCGATCTGCGACCAGTTCGGCGATTTCTGCCAGAAAGTTAGCGGCGCGGTGGTTGGCTCCTTCGTTGCCGTTGTTCTGATTATGTTCCTTATCTTGTTGTCCGCTTTCGCCATCAGAAACACTCACTAA

Coding sequence (CDS)

ATGAAGAACTCCGGCGATTCGACCGTCATCGACGTGCCCCCGACCGCAGGCAGCAGCAAAAAGAAAGCGATTGCTTCCCGGCAAGAGAATGCCGGTGGCGGGTTGAAGCGGGGGCTCGCCGTGTTCGACTTCGTTCTCAGGCTTGGCGCTTTGGGCGCTGCCTTGGCTGCAGCTGCGGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAATTTGAAGCTAGCTATGATGATCTTCCCACTTTTCAATTCTTCTTGATAGCGATGGGAATCATTGCAGGTTACATAGTTCTCTCGCTTCCATTCTCCATCGTCTGCATAGTCCGCCCGACTGCGGTCGGGATCCGATTGCTCCTCCTCATCCTCGACACCGTGGCTCTCACATTGGCCACGTCGGCCGCCGCGGCCGCCGCGGCCATAGTGTATCTGGCCCACAGCGGCAACTCCGACACCAACTGGCTGGCGATCTGCGACCAGTTCGGCGATTTCTGCCAGAAAGTTAGCGGCGCGGTGGTTGGCTCCTTCGTTGCCGTTGTTCTGATTATGTTCCTTATCTTGTTGTCCGCTTTCGCCATCAGAAACACTCACTAA

Protein sequence

MKNSGDSTVIDVPPTAGSSKKKAIASRQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFVAVVLIMFLILLSAFAIRNTH

Homology

[Close]

BLAST of Tan0019413 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.0e-66
Identity = 137/194 (70.62%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 6   DSTVIDVPPTAGSSKKKA-IASRQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAMGTS 65
           +S  ID+P ++  +K KA + +   N  GG ++G+A+FDF+LRL A+  ALAAAAAMGTS
Sbjct: 4   ESAAIDIPESSSVAKGKAPLIAVSRNEKGGYRKGIAIFDFILRLAAIATALAAAAAMGTS 63

Query: 66  DETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIRLLL 125
           DETLPFFTQFFQF+ASYDDLPTFQFF+IA+ I+ GY+VLSLPFSIV IVRP AVG RLLL
Sbjct: 64  DETLPFFTQFFQFQASYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVAIVRPHAVGPRLLL 123

Query: 126 LILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFVAVV 185
           +ILD VALTL T+A AAAAAIVYLAH+GNS+TNWLAIC Q+GDFCQKVSGAVV SF+ VV
Sbjct: 124 IILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKVSGAVVASFITVV 183

Query: 186 LIMFLILLSAFAIR 199
           + +FLI+LSAFA+R
Sbjct: 184 IFVFLIVLSAFALR 197

[Close]

BLAST of Tan0019413 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.9e-65
Identity = 137/207 (66.18%), Postives = 168/207 (81.16%), Query Frame = 0


Query: 4   SGDSTVIDVPPTAGSS----KKKA-----IASRQENAGGGLKRGLAVFDFVLRLGALGAA 63
           +G+ST ID+ P   +S    KKK+      A   +     +KRGLA+FDFVLR+G L +A
Sbjct: 3   TGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASA 62

Query: 64  LAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVR 123
           LAAAAAMGTS++TLPFFTQFFQFEASYDDLPTFQFF++AM ++AGY+VLS+PFSIVCI+R
Sbjct: 63  LAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIR 122

Query: 124 PTAVGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSG 183
           P A G R+LLLILD+VALTL T+AA AAAA+V LAHSGNS TNWLAIC+QFGDFCQ+ SG
Sbjct: 123 PHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASG 182

Query: 184 AVVGSFVAVVLIMFLILLSAFAIRNTH 202
           AVVGSF AV+L + LIL SA +++N+H
Sbjct: 183 AVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of Tan0019413 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.7e-65
Identity = 138/193 (71.50%), Postives = 162/193 (83.94%), Query Frame = 0


Query: 7   STVIDVPPTAGSSKKKA-IASRQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAMGTSD 66
           ST ID+P ++  SK  A + +      GG K+G+A+FDF+LRL A+  ALAAAA+MGTSD
Sbjct: 5   STEIDMPESSSVSKGTAPLIAAPMKEKGGYKKGIAIFDFILRLAAIATALAAAASMGTSD 64

Query: 67  ETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIRLLLL 126
           ETLPFFTQFFQF+ASYDDLPTFQFF+IAM I+AGY+VLSLPFSIV IVRP A G RLLL+
Sbjct: 65  ETLPFFTQFFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHAAGPRLLLI 124

Query: 127 ILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFVAVVL 186
           ILDTVALTL T+A AAAAAIVYLAH+GNS TNWLAIC QFGDFCQK SGAVV SF+ VV+
Sbjct: 125 ILDTVALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITVVI 184

Query: 187 IMFLILLSAFAIR 199
            +FL++LSAFA+R
Sbjct: 185 FVFLLVLSAFALR 197

[Close]

BLAST of Tan0019413 vs. ExPASy Swiss-Prot
Match: P0DI43 (Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.7e-63
Identity = 140/197 (71.07%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 4   SGDSTVIDVPPTAGSSKKKA--IASRQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAM 63
           SGD   IDVP ++  +K KA  IA+ +E    G K+GL +FDF+LRLGA+ AALAAAA M
Sbjct: 3   SGDHAAIDVPESSAVAKGKAPLIATPREQK-SGFKKGLGIFDFLLRLGAIIAALAAAATM 62

Query: 64  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIR 123
           GTSDETLPFFTQFFQFEASYDDLPTF FF+IAM +I GY+VLSLPFSIV IVRP AV  R
Sbjct: 63  GTSDETLPFFTQFFQFEASYDDLPTFMFFVIAMALIGGYLVLSLPFSIVTIVRPHAVAPR 122

Query: 124 LLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFV 183
           LLL ILD VALTL T+A AAAAAIVYLAH+GN +TNWLAIC QFGDFCQ+VSGAVV SFV
Sbjct: 123 LLLFILDIVALTLTTAAGAAAAAIVYLAHNGNPNTNWLAICQQFGDFCQEVSGAVVASFV 182

Query: 184 AVVLIMFLILLSAFAIR 199
            VV++M L+LLS  A++
Sbjct: 183 TVVVLMSLVLLSGVALK 198

[Close]

BLAST of Tan0019413 vs. ExPASy Swiss-Prot
Match: B9SX12 (Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.1e-62
Identity = 132/197 (67.01%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 7   STVIDVPPTAGS-SKKKA----IASRQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAM 66
           ST I++P  + + +K KA     +S      GG K+G+A+FDF+LRLGA+ +AL+AAA M
Sbjct: 2   STTIEIPAESSAVAKGKAPLIGASSSSYEKKGGYKKGIAIFDFILRLGAVISALSAAATM 61

Query: 67  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIR 126
           GTSDETLPFFTQFFQFEA YDD PTFQFF+IAMG + GY+VLSLPFS+V I+RP AVGIR
Sbjct: 62  GTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIRPHAVGIR 121

Query: 127 LLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFV 186
           LLLLILDTVALTL T+AAAAAAAIVYLAH+GN   NWLA+C QFGDFCQKVSG VV SFV
Sbjct: 122 LLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGVVASFV 181

Query: 187 AVVLIMFLILLSAFAIR 199
           +V++ + L+++SA A+R
Sbjct: 182 SVLVFLLLVVMSAVALR 198

[Close]

BLAST of Tan0019413 vs. NCBI nr
Match: XP_038905871.1 (casparian strip membrane protein 2 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85
Identity = 177/202 (87.62%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKAIAS-RQENAGGGLKRGLAVFDFVLRLGALGAALAAAA 60
           MKNSGDSTVIDVPPTAGSSKKKA+ S     AGGG+KRGLA+FDFVLRLGALGAAL AAA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAA 60

Query: 61  AMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVG 120
           +MGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGI+AGY+VLSLPFSIVCIVRP AVG
Sbjct: 61  SMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVG 120

Query: 121 IRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGS 180
           IRLLLLILDTV LTLATSAAAAAAAIVYLAH GN+ TNWLAICDQF DFCQK+SGAV+G+
Sbjct: 121 IRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFEDFCQKISGAVIGA 180

Query: 181 FVAVVLIMFLILLSAFAIRNTH 202
           F+A VL+MFLILLSAFAIRNTH
Sbjct: 181 FIAAVLMMFLILLSAFAIRNTH 202

[Close]

BLAST of Tan0019413 vs. NCBI nr
Match: XP_022945176.1 (casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028124.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-83
Identity = 178/204 (87.25%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKA---IASRQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNS DSTVIDVPPTAGSSK KA   +ASRQ NA GG+KRGL VFDFVLRLGALGAALAA
Sbjct: 1   MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNA-GGMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGIIAGY+ LS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VGIRL+L ILDTVALT ATSAAAAAAA+VYLAHSGNS+TNWLAICDQF DFCQ +SGAVV
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           GSFVAV+LIMFL+LLSAFAIRNTH
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Tan0019413 vs. NCBI nr
Match: XP_004149191.1 (casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical protein Csa_001066 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 171/203 (84.24%), Postives = 185/203 (91.13%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKAIASRQE--NAGGGLKRGLAVFDFVLRLGALGAALAAA 60
           MKNSGDSTVIDVPPTA SSKKKA+ S      A GG+KRGL++FDFVLRLGALGAAL AA
Sbjct: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAV 120
           AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGI+AGY+ LSLPFSIVCIVRP AV
Sbjct: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPRAV 120

Query: 121 GIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVG 180
           G+RLLLLILDTV LTLATSAAAAAAAIVYLAH GN+ TNWLAICDQF DFCQKVSGAV+G
Sbjct: 121 GLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDFCQKVSGAVIG 180

Query: 181 SFVAVVLIMFLILLSAFAIRNTH 202
           +F+A +L+MFL+LLSAF IRNTH
Sbjct: 181 AFIAALLMMFLVLLSAFGIRNTH 203

[Close]

BLAST of Tan0019413 vs. NCBI nr
Match: XP_008442871.1 (PREDICTED: casparian strip membrane protein 2 [Cucumis melo] >KAA0043855.1 casparian strip membrane protein 2 [Cucumis melo var. makuwa] >TYK25280.1 casparian strip membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 315.1 bits (806), Expect = 4.4e-82
Identity = 172/204 (84.31%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAG-SSKKKAIAS--RQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNSGDSTVIDVPPTAG SSKKKA+ S    + A GG+KRGL++FDFV+RLGALGAAL A
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGI+AGY+ LSLPFSIVCIVRP A
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VG+RLLLLILDTV LTLATSAAAAAAAIVYLAH GNS TNWLAICDQF DFCQ +SGAV+
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           G+F+A +L+MFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

[Close]

BLAST of Tan0019413 vs. NCBI nr
Match: XP_023538909.1 (casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 5.8e-82
Identity = 176/204 (86.27%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKA---IASRQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNS DSTVIDVPPTAGSSK KA   +ASRQ NA G +KRGL VFDFVLRLGALGAALAA
Sbjct: 1   MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNA-GRMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGIIAGY+ LS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VGIRL+L ILDTVALT ATSAAAAAAA+VYLAHSGNS+TNWLAICDQF DFCQ +SGAVV
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           GSFVAV+LIMFL+LLSAFAIRN H
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNAH 203

[Close]

BLAST of Tan0019413 vs. ExPASy TrEMBL
Match: A0A6J1G046 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.7e-84
Identity = 178/204 (87.25%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKA---IASRQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNS DSTVIDVPPTAGSSK KA   +ASRQ NA GG+KRGL VFDFVLRLGALGAALAA
Sbjct: 1   MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNA-GGMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGIIAGY+ LS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VGIRL+L ILDTVALT ATSAAAAAAA+VYLAHSGNS+TNWLAICDQF DFCQ +SGAVV
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           GSFVAV+LIMFL+LLSAFAIRNTH
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Tan0019413 vs. ExPASy TrEMBL
Match: A0A0A0LBG8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.6e-83
Identity = 171/203 (84.24%), Postives = 185/203 (91.13%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKAIASRQE--NAGGGLKRGLAVFDFVLRLGALGAALAAA 60
           MKNSGDSTVIDVPPTA SSKKKA+ S      A GG+KRGL++FDFVLRLGALGAAL AA
Sbjct: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAV 120
           AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGI+AGY+ LSLPFSIVCIVRP AV
Sbjct: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPRAV 120

Query: 121 GIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVG 180
           G+RLLLLILDTV LTLATSAAAAAAAIVYLAH GN+ TNWLAICDQF DFCQKVSGAV+G
Sbjct: 121 GLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDFCQKVSGAVIG 180

Query: 181 SFVAVVLIMFLILLSAFAIRNTH 202
           +F+A +L+MFL+LLSAF IRNTH
Sbjct: 181 AFIAALLMMFLVLLSAFGIRNTH 203

[Close]

BLAST of Tan0019413 vs. ExPASy TrEMBL
Match: A0A5D3DPU1 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004150 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 172/204 (84.31%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAG-SSKKKAIAS--RQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNSGDSTVIDVPPTAG SSKKKA+ S    + A GG+KRGL++FDFV+RLGALGAAL A
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGI+AGY+ LSLPFSIVCIVRP A
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VG+RLLLLILDTV LTLATSAAAAAAAIVYLAH GNS TNWLAICDQF DFCQ +SGAV+
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           G+F+A +L+MFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

[Close]

BLAST of Tan0019413 vs. ExPASy TrEMBL
Match: A0A1S3B7G3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 172/204 (84.31%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAG-SSKKKAIAS--RQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNSGDSTVIDVPPTAG SSKKKA+ S    + A GG+KRGL++FDFV+RLGALGAAL A
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGI+AGY+ LSLPFSIVCIVRP A
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VG+RLLLLILDTV LTLATSAAAAAAAIVYLAH GNS TNWLAICDQF DFCQ +SGAV+
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           G+F+A +L+MFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

[Close]

BLAST of Tan0019413 vs. ExPASy TrEMBL
Match: A0A6J1L1G0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.8e-82
Identity = 176/204 (86.27%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKKA---IASRQENAGGGLKRGLAVFDFVLRLGALGAALAA 60
           MKNS DSTVIDVP T GSSK KA   +ASRQ NA GG+KRGL VFDFVLRLGALGAALAA
Sbjct: 1   MKNSNDSTVIDVPLTTGSSKSKAAASVASRQANA-GGMKRGLGVFDFVLRLGALGAALAA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTA 120
           AA MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGIIAGY+ LS+PFSIVCIVRP A
Sbjct: 61  AATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAA 120

Query: 121 VGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVV 180
           VGIRL+L ILDTVALT ATSAAAAAAA+VYLAHSGNS+TNWLAICDQF DFCQ +SGAVV
Sbjct: 121 VGIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVV 180

Query: 181 GSFVAVVLIMFLILLSAFAIRNTH 202
           GSFVAV+LIMFL+LLSAFAIRNTH
Sbjct: 181 GSFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Tan0019413 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 226.9 bits (577), Expect = 1.5e-59
Identity = 127/197 (64.47%), Postives = 155/197 (78.68%), Query Frame = 0


Query: 6   DSTVIDVPPTAGS-SKKKAI---ASRQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAM 65
           DS  +DVP  + S  K KA     +R     GG KRGL++FDF+LRL A+ AALAAAA M
Sbjct: 4   DSIAVDVPAESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATM 63

Query: 66  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIR 125
           GTSDETLPFFTQF QFEASYDDLPTFQFF++A+ I+AGY+VLSLPFS+V IVRP AV  R
Sbjct: 64  GTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPR 123

Query: 126 LLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFV 185
           LLLL+LDT AL L T+AA+AAAAIVYLAH+GN++TNWL IC QFGDFCQK SGAVV +F 
Sbjct: 124 LLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFA 183

Query: 186 AVVLIMFLILLSAFAIR 199
           +V  +  L+++S  +++
Sbjct: 184 SVTFLAILVVISGVSLK 200

[Close]

BLAST of Tan0019413 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57
Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAGSSKKK-----AIASRQENAG-GGLKRGLAVFDFVLRLGALGAA 60
           MKN  +ST IDVP  + S+ K       +A     +G GG  RGLA+FDF+LRL A+ AA
Sbjct: 1   MKN--ESTFIDVPAESSSAMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAA 60

Query: 61  LAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCIVR 120
           LAAAA MGTSDETLPFFTQF QFEASYDDLPTFQFF+IAM ++ GY+VLSLP S+V I+R
Sbjct: 61  LAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILR 120

Query: 121 PTAVGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKVSG 180
           P A   RLLLL+LDT  L L T+AA++AAAI YLAHSGN +TNWL IC QFGDFCQK SG
Sbjct: 121 PLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 180

Query: 181 AVVGSFVAVVLIMFLILLSAFAIR 199
           AVV +FV+VV    L+++S  A++
Sbjct: 181 AVVSAFVSVVFFTILVVISGVALK 202

[Close]

BLAST of Tan0019413 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 120/206 (58.25%), Postives = 149/206 (72.33%), Query Frame = 0


Query: 6   DSTVIDV--PPTAGSS--------KKK---AIASRQENAGGGLKRGLAVFDFVLRLGALG 65
           +ST IDV  P T   S        KKK   A+ASR     GG KRGLA+FDF+LRL A+ 
Sbjct: 4   ESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVASR-----GGAKRGLAIFDFLLRLAAIA 63

Query: 66  AALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIIAGYIVLSLPFSIVCI 125
             + AA+ M T++ETLPFFTQF QF+A YDDLP FQ+F+IA+ ++A Y+VLSLPFSIV I
Sbjct: 64  VTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSI 123

Query: 126 VRPTAVGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSGNSDTNWLAICDQFGDFCQKV 185
           VRP AV  RL+LLI DT+ +TL TSAAAAAA+I YLAH+GN  TNWL IC QFGDFCQ V
Sbjct: 124 VRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNV 183

Query: 186 SGAVVGSFVAVVLIMFLILLSAFAIR 199
           S AVV   +A++  + LI++SA A++
Sbjct: 184 STAVVADSIAILFFIVLIIISAIALK 204

[Close]

BLAST of Tan0019413 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-50
Identity = 106/174 (60.92%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 27  RQENAGGGLKRGLAVFDFVLRLGALGAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPT 86
           +++ +  G KRG+A+FDFVLRL A   A+AAAA M T++ETLPFFTQF QF+A Y DLPT
Sbjct: 47  QEKMSPAGWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPT 106

Query: 87  FQFFLIAMGIIAGYIVLSLPFSIVCIVRPTAVGIRLLLLILDTVALTLATSAAAAAAAIV 146
              F+I   I+ GY+ LSLPFSIVCI+RP AV  RL L++ DTV + L   AA+A+AAIV
Sbjct: 107 MSSFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIV 166

Query: 147 YLAHSGNSDTNWLAICDQFGDFCQKVSGAVVGSFVAVVLIMFLILLSAFAIRNT 201
           YLAH+GNS +NWL +C QFGDFCQ  SGAVV SF+A  L+MFL++LSAFA++ T
Sbjct: 167 YLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKRT 220

[Close]

BLAST of Tan0019413 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 164.5 bits (415), Expect = 9.0e-41
Identity = 85/169 (50.30%), Postives = 123/169 (72.78%), Query Frame = 0


Query: 33  GGLKRGLAVFDFVLRLGALGAALAAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLI 92
           G + R +A+ +F+LR+ A    + +A  MGT+ ETLPFFTQF +F+A Y+DLP   FF++
Sbjct: 19  GLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVV 78

Query: 93  AMGIIAGYIVLSLPFSIVCIVRPTAVGIRLLLLILDTVALTLATSAAAAAAAIVYLAHSG 152
           A  +++GY++LSL  + V IV+      R+LL+ILD   L L TS A++AAAIVYLAH+G
Sbjct: 79  ANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNG 138

Query: 153 NSDTNWLAICDQFGDFCQKVSGAVVGSFVAVVLIMFLILLSAFAIRNTH 202
           N+ TNW AIC QF  FC+++SG+++GSF+A+VL++ LILLSA A+   H
Sbjct: 139 NNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

The following BLAST results are available for this feature:

BLAST of Tan0019413 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9HBX2	6.0e-66	70.62	Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
P0DI61	3.9e-65	66.18	Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
B9IIR5	6.7e-65	71.50	Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
P0DI43	3.7e-63	71.07	Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1	[more]
B9SX12	4.1e-62	67.01	Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 P...	[more]

BLAST of Tan0019413 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905871.1	1.5e-85	87.62	casparian strip membrane protein 2 [Benincasa hispida]	[more]
XP_022945176.1	1.8e-83	87.25	casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Caspa...	[more]
XP_004149191.1	1.2e-82	84.24	casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical pr...	[more]
XP_008442871.1	4.4e-82	84.31	PREDICTED: casparian strip membrane protein 2 [Cucumis melo] >KAA0043855.1 caspa...	[more]
XP_023538909.1	5.8e-82	86.27	casparian strip membrane protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0019413 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G046	8.7e-84	87.25	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1	[more]
A0A0A0LBG8	5.6e-83	84.24	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1	[more]
A0A5D3DPU1	2.1e-82	84.31	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B7G3	2.1e-82	84.31	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1	[more]
A0A6J1L1G0	2.8e-82	86.27	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1	[more]

BLAST of Tan0019413 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06200.1	1.5e-59	64.47	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	2.4e-57	62.75	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	1.1e-51	58.25	Uncharacterised protein family (UPF0497)	[more]
AT2G27370.1	1.3e-50	60.92	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	9.0e-41	50.30	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 37..185 e-value: 1.1E-45 score: 155.0
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 44..196 e-value: 4.7E-42 score: 141.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 13..200
None	No IPR available	PANTHER	PTHR11615:SF332	CASP-LIKE PROTEIN	coord: 13..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019413.1	Tan0019413.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding