Tan0019339 (gene) Snake gourd v1

Overview


Name	Tan0019339
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	pentatricopeptide repeat-containing protein At1g62350
Location	LG09: 57669902 .. 57673701 (-)
RNA-Seq Expression	Tan0019339
Synteny	Tan0019339

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAGCCCCGCTCAATTCTTTTGGGGTTCACTTTCAGTTTCAACGAGCAAAACTCTGTTGTTGTATTCGCTTCAAGGTTCCTCCAGAAGTTTGATGCTGCGATTTGCTCCATATCTTCTTCGCAGAATCTCAAACAGCGCCACCTCCACAATCCCTTTTCATCGCTTTCCCCCCTGCACATTCTTGGAACACGATCACTCACACCAACAATTGCTGTCACGCTTCATCAATGGCTCCGCTTCGAGCCCTAGCCTCTCGATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTGGTCAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTCGCCGTTCTCGTCGAGCTTCAGAGGCAGAACCAGGTCTTTCTGTGCATGAAGGTATGCCCTCTTTTGCTCTCTCCATCTATATCTCTTGCCCTCCATGACATGTGTTGAATTTGTTGGGAGACAAACCTGAAGCGCTATCAACGAAATGTGGATTCGATCAGTTTATTGCTATAATGTGTTGGGTTAATCCAGAATTTCGGTAGTTCGGATGAATAGTGATTATATAGGAATCATTTCGAATTTTTATCAAACCTTAGAATTTACGGGTTGGAAATAACATAGGTACGCTTTTCTTCAATTTTTATATACTTTCGGGGTTTTAGGAAGATTTTCCTTGTCAAGTATTTGATGATTGCATTTTGAAGTGATAGAAAATAGATAGCTTGCTATGGCTTGCAAATCTTCACTTAGGTGAAATGGAGTTAAGAGCACTTGCTTGTGCTAGCCTTTGGCTGCCTGATAGACTTGTGGAGTGGGTAGAAGTTCCATAAATCAAGATCAAGGCAGGAAGATTTTCCTCAACAGGTCGAGTCTATAGGAGATATGATATAAAAGGATGGCTTCAAAAAAGCATGCTGAATCCCAACAAGTTAGTTGAGACTAGCTTGCGATATTGATTCAATCATCAAGCTTTGATTGAAGGGGTTAGCTTGGGATTAGTCTTTAGTTCAGAATAAGTCTCACATTGGAAATTAAAACTTTGTAATATGCCTTGTTGGCAAAATAGTTGTTGGGATTCCCATTGGCGAAGAGATTTTTGCAATGCCAAAACCAAAAATCACTAGTAGATCCCTTTCAAAACGGAAAAGAAGCTTCTTTGGAAAAATTTGATAAGCGCCTATTGCTGGACATTTGGCAGGAAAGAAATAGAAGAATCTTCCAAGATAAGGAGTACTCTTATCAGGGTTTTTTGATGCTATAGTTAATACGATTGTGACTTGGTGTAAATGCTCCCCCTCTTCCATCACTATAGCTTTTCTTCTGTCCTTTTCAATTGGAGAGGTTTTTTTTGTAGTTCTTCTTATGGGGGTTTCTCCCATCTTTTCTAATTTCACATCATCAATGAAATTGTTTTTATTAAAAAAAAATCACTGGTAAATCTTGGGGAGAAATTGAGGATCAACTCCATTATATATATATATATAGGCTATTCAAGAGTTTTTCTATCATTGAGATATTTTCCGAAGCCAAGAAACGAAGAAGAGGAGGTTTGATGAATGAAGACCTACTTTGAGGAGAGCAAGTAGAGTTTGGAGAAGAGAGAAGAAAGAGGTGAATCCATTTCTAATGTCCTCCAAAAATTGAGCATCCTTGCCATTATGGACACAAACTTTTTTTCTGTTGGCTAAAACCTTCTTTAAATTAAAAATCGCTCTCCAAGGCCTTCTTGAGGTTTAGATTTAGGGGATCTTGTCCATCACTTTCCAATATCGGAACATAATAGCTAGCAATAATCTTCCTCACTAATGCTGATTTTTTGTTTGAAAATCTCCACATCCAGTTTACCAAGAAAGAGATGTTTCTCCCTTTTTTTTCCTAAACCAAGCTTTTGAGGAAAATGAAAGAATATATCAGGACGTACAAAGTTCCTCTCAATTAGATTGCCAAGTTTCCCAACTATTGGATGTCATTGGGTGAGGATGACTACTTTTGGTGGAGAAAAATTGGAAGTATGCTAGTCATTTTACAATATAATAGGGGTCTTTTGTTTGCTTGGAGGCCGGATGCACATAAGAATCTGTCACTGAGTGATACATCTATTAGAAACACTTATTATAAGGGATGAAGTACACTATGACATAAGATGAATTACATAACTAGGCGTTGTCTCCTTTGGTGACAATAAAGTAATTTAACAAATAAAAATCCACTTATGTACCTTTAAGCAAAATAAATAAAAAATCTGCTTATGCTTAATCAAGTGTTTCGTAGTGGGCATTTGACTAATCTACATTACTTTAGTGCCCTTTTATGTTCAAGAGATATTGAACGACAAGTTTGAGAATATTAGATGATTGGAAACACAATTTGGAGGTAAATTTGTTTGTTTGGTTGATTCCCTATTAGCTTTGAAGGACCTATCCTCTTCCAATCATATTTCTTTTAAAATGATGCATGCCCAGGACCTTATAACCTAAAAAATTTACTCTGTACTGTCTTGATAATCTAATCTATTGTCTTGGAGAATATTATCCAACTCTTGTAGTTTTGTTATTTAACAAAGCCAACATTTATATTTTTTTTTAAAAAATTGACCTTTTAAGTTTAAAGAAACCTTTGGTTTTACCCCATTTATTGCATTGTTGATACCTGTCTTAACCCTTCAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGTCCCGACATGTTCTTTTATAGAGACATGCTTATGATGCTTGCGAAAAACAAAAGGGTGGAAGAAACAAAACAAGTATGGCAGGATCTGAAAAGAGAGGGAGTACTATTTGATCAGCATACTTTTGGAGACATTATGCGGGCATACTTGGATAATGCAATGACCTCTGAGGCAATGGACATATATCGTGAAATGAGACAATCACCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAGGGACTCGTTCCATACCCAGAATTGAGAGAACAAGTTAAAGATGACTTCTTGGAGCTTTTCCCTGATATGATCGTCTATGATCCACCTGAAGACTTGTTTGAAGAAGATGAAGATAGGAGGAAGAGTGAAAGATGATCAAGGATGCGACTGTTACGGTTGATTCATTAGCCTTTTATACGTTAGATTACTAGTTTCACCCTTGAACTTTCTAAGTTGTATATTTATTAGGCCTTATGTCTAGTTGATCCATGAATTTTAAAAGTGTCTCATAAGTTTTTAAACTTTCAATTTTGTGTCTTAAGTCTTTAAAGTTCGACCTTTAGACATTTTTCTAAATTCACATAAGTATTAGACACAAAGTTGAAAGTTAGAGTTCAATTAAACACTAAATTCAATTTTGTGTTTAATAAGCATGTGAATGTTAACAAACGTCGAATAGGTCAAAGATCTATCATCTATGAGCCACTTTTAAACTTCAAAAATCAAACTTAGCACAATTTTGAAGGTTCAGGAAATAAACTTAGTAATTTAAGATTGCTCGACCATGTTTAGACAGATTGTGATCATGTAATCGCTTGTTGGGATATTTGCCCACTCATAGTAGCAGCCCTACTATGTTCGAAGATTCTTTTGTAGATTGATAAAGAGTTACCAGAATCTTTGGCCATTTTTTCGATTTAGGAAACTTTCAAAGAACACTTATAGTTATATCAATTTTGGATTCAATGTGTTTTTTTAGTTAACCAAGAGGTTGAGGACACATGTTCTATGCTAGTTAAGTTATACTCGGATGGGTG

mRNA sequence

CAGAAGCCCCGCTCAATTCTTTTGGGGTTCACTTTCAGTTTCAACGAGCAAAACTCTGTTGTTGTATTCGCTTCAAGGTTCCTCCAGAAGTTTGATGCTGCGATTTGCTCCATATCTTCTTCGCAGAATCTCAAACAGCGCCACCTCCACAATCCCTTTTCATCGCTTTCCCCCCTGCACATTCTTGGAACACGATCACTCACACCAACAATTGCTGTCACGCTTCATCAATGGCTCCGCTTCGAGCCCTAGCCTCTCGATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTGGTCAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTCGCCGTTCTCGTCGAGCTTCAGAGGCAGAACCAGGTCTTTCTGTGCATGAAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGTCCCGACATGTTCTTTTATAGAGACATGCTTATGATGCTTGCGAAAAACAAAAGGGTGGAAGAAACAAAACAAGTATGGCAGGATCTGAAAAGAGAGGGAGTACTATTTGATCAGCATACTTTTGGAGACATTATGCGGGCATACTTGGATAATGCAATGACCTCTGAGGCAATGGACATATATCGTGAAATGAGACAATCACCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAGGGACTCGTTCCATACCCAGAATTGAGAGAACAAGTTAAAGATGACTTCTTGGAGCTTTTCCCTGATATGATCGTCTATGATCCACCTGAAGACTTGTTTGAAGAAGATGAAGATAGGAGGAAGAGTGAAAGATGATCAAGGATGCGACTGTTACGGTTGATTCATTAGCCTTTTATACGTTAGATTACTAGTTTCACCCTTGAACTTTCTAAGTTGTATATTTATTAGGCCTTATGTCTAGTTGATCCATGAATTTTAAAAGTGTCTCATAAGTTTTTAAACTTTCAATTTTGTGTCTTAAGTCTTTAAAGTTCGACCTTTAGACATTTTTCTAAATTCACATAAGTATTAGACACAAAGTTGAAAGTTAGAGTTCAATTAAACACTAAATTCAATTTTGTGTTTAATAAGCATGTGAATGTTAACAAACGTCGAATAGGTCAAAGATCTATCATCTATGAGCCACTTTTAAACTTCAAAAATCAAACTTAGCACAATTTTGAAGGTTCAGGAAATAAACTTAGTAATTTAAGATTGCTCGACCATGTTTAGACAGATTGTGATCATGTAATCGCTTGTTGGGATATTTGCCCACTCATAGTAGCAGCCCTACTATGTTCGAAGATTCTTTTGTAGATTGATAAAGAGTTACCAGAATCTTTGGCCATTTTTTCGATTTAGGAAACTTTCAAAGAACACTTATAGTTATATCAATTTTGGATTCAATGTGTTTTTTTAGTTAACCAAGAGGTTGAGGACACATGTTCTATGCTAGTTAAGTTATACTCGGATGGGTG

Coding sequence (CDS)

ATGCTGCGATTTGCTCCATATCTTCTTCGCAGAATCTCAAACAGCGCCACCTCCACAATCCCTTTTCATCGCTTTCCCCCCTGCACATTCTTGGAACACGATCACTCACACCAACAATTGCTGTCACGCTTCATCAATGGCTCCGCTTCGAGCCCTAGCCTCTCGATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTGATTGTGGTCAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTCGCCGTTCTCGTCGAGCTTCAGAGGCAGAACCAGGTCTTTCTGTGCATGAAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGTCCCGACATGTTCTTTTATAGAGACATGCTTATGATGCTTGCGAAAAACAAAAGGGTGGAAGAAACAAAACAAGTATGGCAGGATCTGAAAAGAGAGGGAGTACTATTTGATCAGCATACTTTTGGAGACATTATGCGGGCATACTTGGATAATGCAATGACCTCTGAGGCAATGGACATATATCGTGAAATGAGACAATCACCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAGGGACTCGTTCCATACCCAGAATTGAGAGAACAAGTTAAAGATGACTTCTTGGAGCTTTTCCCTGATATGATCGTCTATGATCCACCTGAAGACTTGTTTGAAGAAGATGAAGATAGGAGGAAGAGTGAAAGATGA

Protein sequence

MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLDNAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRRKSER

Homology

[Close]

BLAST of Tan0019339 vs. ExPASy Swiss-Prot
Match: Q1PFH7 (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-81
Identity = 146/192 (76.04%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 63  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNV 122
           M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQVFLCMKLY V
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 123 VRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLDNA 182
           VR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VW+DLK+E VLFDQHTFGD++R +LDN 
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 183 MTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPED 242
           +  EAM +Y EMR+SPDRPLSLPFRVILKGLVPYPELRE+VKDDFLELFP MIVYDPPED
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 243 LFEEDEDRRKSE 255
           + E+ ++  +++
Sbjct: 181 ICEDSDEEARTD 192

[Close]

BLAST of Tan0019339 vs. ExPASy Swiss-Prot
Match: Q9STF9 (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.3e-51
Identity = 103/244 (42.21%), Postives = 160/244 (65.57%), Query Frame = 0


Query: 4   FAPYLLRRIS-NSATSTIPFHRFPPCTFLE--HDHSHQQLLSRFINGSASSPSLSIWRRK 63
           FA    + I+ N +   I F    P T L           +SRF +G    P   +WR K
Sbjct: 14  FASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGRPRGP---LWRGK 73

Query: 64  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 123
           K +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ +  L +K++
Sbjct: 74  KLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKMF 133

Query: 124 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 183
            V++K+ WY+PD+F Y+D+++ LAK+KR++E   +W+ +K+E +  D  T+ +++R +L 
Sbjct: 134 EVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLR 193

Query: 184 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 243
           +   ++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+   YDPP
Sbjct: 194 DGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPP 253

Query: 244 EDLF 245
           E++F
Sbjct: 254 EEIF 254

[Close]

BLAST of Tan0019339 vs. ExPASy Swiss-Prot
Match: Q9ZVX5 (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04
Identity = 28/112 (25.00%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 131 PDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLDNAMTSEAMDI 190
           PD   Y  +L  ++K  R+ + K++  D+K+ G++ ++ T+ +++  Y       EA  I
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 191 YREMRQSPDRPLSLPFRVILKGLVPYPELRE--QVKDDF--LELFPDMIVYD 239
              M+Q+   P    + +++ GL     +RE  ++ D    L+L PD++ Y+
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349

[Close]

BLAST of Tan0019339 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 18/81 (22.22%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 117 MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMR 176
           ++++ ++R+++WY+P++  Y  +++ML K K+ E+  +++Q++  EG + +   +  ++ 
Sbjct: 134 IQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVS 193

Query: 177 AYLDNAMTSEAMDIYREMRQS 198
           AY  +     A  +   M+ S
Sbjct: 194 AYSRSGRFDAAFTLLERMKSS 214

[Close]

BLAST of Tan0019339 vs. ExPASy Swiss-Prot
Match: Q9LVW6 (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.4e-04
Identity = 36/136 (26.47%), Postives = 66/136 (48.53%), Query Frame = 0


Query: 63  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNV 122
           +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ+   L + + + 
Sbjct: 48  LSTEAIQSIQSLKRAHRTGVSLSLTLRP-LRRLIKSDLISVLRELLRQDYCTLAVHVLST 107

Query: 123 VRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLDN 182
           +R E  Y P D+  Y D++  L +NK  +E  ++  ++       D      ++RA +  
Sbjct: 108 LRTE--YPPLDLVLYADIVNALTRNKEFDEIDRLIGEIDGIDQRSDDKALAKLIRAVVGA 167

Query: 183 AMTSEAMDIYREMRQS 198
                 + +Y  MR+S
Sbjct: 168 ERRESVVRVYTLMRES 180

[Close]

BLAST of Tan0019339 vs. NCBI nr
Match: XP_022966084.1 (pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima] >XP_022966085.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 235/255 (92.16%), Postives = 238/255 (93.33%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRRISNSATSTI  +RF  CTF EH    QQLL RFI GSASSPSLSIWRRK
Sbjct: 1   MLRFAPNLLRRISNSATSTIHLYRFTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRK 60

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLTMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 180

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQV+DDFLELFPDMIVYDPP
Sbjct: 181 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVRDDFLELFPDMIVYDPP 240

Query: 241 EDLFEEDEDRRKSER 256
           EDLFEEDEDR KS R
Sbjct: 241 EDLFEEDEDRFKSVR 255

[Close]

BLAST of Tan0019339 vs. NCBI nr
Match: KAG6588226.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 455.3 bits (1170), Expect = 3.5e-124
Identity = 234/255 (91.76%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRR SNSATSTI  +RF  CTF EH    QQLL RFI GSASSPSLSIWRRK
Sbjct: 67  MLRFAPNLLRRFSNSATSTIHLYRFTDCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRK 126

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 127 KEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 186

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 187 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 246

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP
Sbjct: 247 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 306

Query: 241 EDLFEEDEDRRKSER 256
           EDLFEEDED  KS R
Sbjct: 307 EDLFEEDEDMCKSVR 321

[Close]

BLAST of Tan0019339 vs. NCBI nr
Match: KAG7022139.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454.5 bits (1168), Expect = 5.9e-124
Identity = 233/253 (92.09%), Postives = 236/253 (93.28%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRR SNSATSTI  +RF  CTF EH    QQLL RFI GSASSPSLSIWRRK
Sbjct: 35  MLRFAPNLLRRFSNSATSTIHLYRFTDCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRK 94

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 95  KEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 154

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 155 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 214

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP
Sbjct: 215 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 274

Query: 241 EDLFEEDEDRRKS 254
           EDLFEEDED  KS
Sbjct: 275 EDLFEEDEDMCKS 287

[Close]

BLAST of Tan0019339 vs. NCBI nr
Match: XP_023531705.1 (pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo] >XP_023531706.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 3.8e-123
Identity = 231/253 (91.30%), Postives = 235/253 (92.89%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRR SN ATSTI  +RF  CTF EH    QQLL RFI GSASSPSLS+WRRK
Sbjct: 1   MLRFAPNLLRRFSNRATSTIHLYRFTHCTFFEHHRPQQQLLLRFITGSASSPSLSVWRRK 60

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 180

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP
Sbjct: 181 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240

Query: 241 EDLFEEDEDRRKS 254
           EDLFEEDED  KS
Sbjct: 241 EDLFEEDEDMCKS 253

[Close]

BLAST of Tan0019339 vs. NCBI nr
Match: XP_022930047.1 (pentatricopeptide repeat-containing protein At1g62350 [Cucurbita moschata] >XP_022930049.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita moschata])

HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122
Identity = 231/253 (91.30%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRR SNSATSTI  +R   CTF EH    QQLL RFI GSASSPSLSIWRRK
Sbjct: 1   MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRK 60

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 180

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP
Sbjct: 181 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240

Query: 241 EDLFEEDEDRRKS 254
           EDLFEEDE   KS
Sbjct: 241 EDLFEEDEGMCKS 253

[Close]

BLAST of Tan0019339 vs. ExPASy TrEMBL
Match: A0A6J1HQL7 (pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita maxima OX=3661 GN=LOC111465833 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.9e-125
Identity = 235/255 (92.16%), Postives = 238/255 (93.33%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRRISNSATSTI  +RF  CTF EH    QQLL RFI GSASSPSLSIWRRK
Sbjct: 1   MLRFAPNLLRRISNSATSTIHLYRFTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRK 60

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLTMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 180

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQV+DDFLELFPDMIVYDPP
Sbjct: 181 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVRDDFLELFPDMIVYDPP 240

Query: 241 EDLFEEDEDRRKSER 256
           EDLFEEDEDR KS R
Sbjct: 241 EDLFEEDEDRFKSVR 255

[Close]

BLAST of Tan0019339 vs. ExPASy TrEMBL
Match: A0A6J1EQI1 (pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita moschata OX=3662 GN=LOC111436516 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 231/253 (91.30%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLRFAP LLRR SNSATSTI  +R   CTF EH    QQLL RFI GSASSPSLSIWRRK
Sbjct: 1   MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRK 60

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK EGVLFDQHTFGDIMRAYLD
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLD 180

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP
Sbjct: 181 NAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240

Query: 241 EDLFEEDEDRRKS 254
           EDLFEEDE   KS
Sbjct: 241 EDLFEEDEGMCKS 253

[Close]

BLAST of Tan0019339 vs. ExPASy TrEMBL
Match: A0A1S3BQ11 (pentatricopeptide repeat-containing protein At1g62350 OS=Cucumis melo OX=3656 GN=LOC103491974 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.6e-121
Identity = 227/254 (89.37%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWRRK 60
           MLR AP LLR+IS+S  S+ PFHRF   TFL  D   QQLL RFI GSASSPSLSIWRRK
Sbjct: 1   MLRLAPNLLRKISSSPVSSTPFHRFSLSTFLNLDLLQQQLLLRFIAGSASSPSLSIWRRK 60

Query: 61  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 120
           KEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDLVAVLVELQRQN VFLCMKLY
Sbjct: 61  KEMGKEGLIVVKELKRLQSNFIRLDRFISSHVSRLLKSDLVAVLVELQRQNHVFLCMKLY 120

Query: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 180
           NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK+EGVLFDQHTFGDI+RAYLD
Sbjct: 121 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKKEGVLFDQHTFGDIIRAYLD 180

Query: 181 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 240
           NAM SEAMDIYREMR+SPDRPLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPP
Sbjct: 181 NAMLSEAMDIYREMRESPDRPLSLPFRVILKGLIPYPELREQVKDDFLELFPDMIVYDPP 240

Query: 241 EDLFEEDEDRRKSE 255
           EDLFEEDEDR KSE
Sbjct: 241 EDLFEEDEDRNKSE 254

[Close]

BLAST of Tan0019339 vs. ExPASy TrEMBL
Match: A0A6J1DGX4 (pentatricopeptide repeat-containing protein At1g62350 OS=Momordica charantia OX=3673 GN=LOC111020768 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.4e-117
Identity = 220/254 (86.61%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MLRFAPYLLRRISN--SATSTIPFHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLSIWR 60
           MLR  P LLRR  N  + T+TIPFH   P TF + D   QQ L RFI GSASSPSLSIWR
Sbjct: 1   MLRLVPNLLRRAPNRVTRTATIPFHLSSPITFFDRDQLQQQSLFRFITGSASSPSLSIWR 60

Query: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMK 120
           RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ QVFLCMK
Sbjct: 61  RKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQKQVFLCMK 120

Query: 121 LYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAY 180
           LYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVWQDLKRE VLFDQHTFGDI+RAY
Sbjct: 121 LYNVVRKEVWYRPDMFFYRDMLMMLSKNKKVEETKQVWQDLKREEVLFDQHTFGDIIRAY 180

Query: 181 LDNAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYD 240
           LDN M SEAMDIYREMRQSPDRPLSLPFRVILKGL+PYPELREQ+KDDFLELFPDMIVYD
Sbjct: 181 LDNGMPSEAMDIYREMRQSPDRPLSLPFRVILKGLIPYPELREQIKDDFLELFPDMIVYD 240

Query: 241 PPEDLFEEDEDRRK 253
           PPEDLFEEDEDR++
Sbjct: 241 PPEDLFEEDEDRKR 254

[Close]

BLAST of Tan0019339 vs. ExPASy TrEMBL
Match: A0A2N9FMM7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16222 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 9.6e-96
Identity = 185/259 (71.43%), Postives = 218/259 (84.17%), Query Frame = 0


Query: 1   MLRFAPYLLRRISNSATSTIP-----FHRFPPCTFLEHDHSHQQLLSRFINGSASSPSLS 60
           MLR A  L+ + S+S+T+ +      F  FP    L  +   +Q L R+I+G ASSPSLS
Sbjct: 1   MLRHARTLITKPSSSSTTALSLSSSFFPDFPKHPLLSENSFSKQWLFRYISGLASSPSLS 60

Query: 61  IWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFL 120
           IWRRKKEMGKEGLIV KELKRL+S+ +RLDRFI S+VSRLLKSDL AVL E QRQ+QVFL
Sbjct: 61  IWRRKKEMGKEGLIVAKELKRLRSDSVRLDRFIRSNVSRLLKSDLFAVLAEFQRQDQVFL 120

Query: 121 CMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIM 180
           CMKLY+VVRKE+WYRPDMFFYRDMLMMLA+NK+V+E K+VW+DLKRE VLFDQHTFGDIM
Sbjct: 121 CMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVDEAKRVWEDLKREEVLFDQHTFGDIM 180

Query: 181 RAYLDNAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMI 240
           RA+LD+ + SEAM+IY EMRQSPD P+SLPFRVILKGL+PYPELRE+VKDDFLELFP MI
Sbjct: 181 RAFLDSGLPSEAMEIYDEMRQSPDPPISLPFRVILKGLLPYPELREKVKDDFLELFPGMI 240

Query: 241 VYDPPEDLFEEDEDRRKSE 255
           VYDPPEDLFE+ + RR++E
Sbjct: 241 VYDPPEDLFEDQDWRRENE 259

[Close]

BLAST of Tan0019339 vs. TAIR 10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-82
Identity = 146/192 (76.04%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 63  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNV 122
           M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQVFLCMKLY V
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 123 VRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLDNA 182
           VR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VW+DLK+E VLFDQHTFGD++R +LDN 
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 183 MTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPED 242
           +  EAM +Y EMR+SPDRPLSLPFRVILKGLVPYPELRE+VKDDFLELFP MIVYDPPED
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 243 LFEEDEDRRKSE 255
           + E+ ++  +++
Sbjct: 181 ICEDSDEEARTD 192

[Close]

BLAST of Tan0019339 vs. TAIR 10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-52
Identity = 103/244 (42.21%), Postives = 160/244 (65.57%), Query Frame = 0


Query: 4   FAPYLLRRIS-NSATSTIPFHRFPPCTFLE--HDHSHQQLLSRFINGSASSPSLSIWRRK 63
           FA    + I+ N +   I F    P T L           +SRF +G    P   +WR K
Sbjct: 14  FASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGRPRGP---LWRGK 73

Query: 64  KEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLY 123
           K +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ +  L +K++
Sbjct: 74  KLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKMF 133

Query: 124 NVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLD 183
            V++K+ WY+PD+F Y+D+++ LAK+KR++E   +W+ +K+E +  D  T+ +++R +L 
Sbjct: 134 EVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFLR 193

Query: 184 NAMTSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPP 243
           +   ++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+   YDPP
Sbjct: 194 DGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPP 253

Query: 244 EDLF 245
           E++F
Sbjct: 254 EEIF 254

[Close]

BLAST of Tan0019339 vs. TAIR 10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain )

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-17
Identity = 58/169 (34.32%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 84  LDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMML 143
           LDR I S   RLLK D+VAVL EL RQN+  L +K++  +RKE WY+P +  Y DM+ ++
Sbjct: 541 LDRVIISKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVM 600

Query: 144 AKNKRVEETKQVWQDLKRE-GVLFDQHTFGDIMRAYLDNAMTSEAMDIYREMRQSPDRPL 203
           A N  +EE   ++  +K E G++ +   F  ++   L++ +    MD Y  M+     P 
Sbjct: 601 ADNSLMEEVNYLYSAMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPD 660

Query: 204 SLPFRVILKGLVPYPE--LREQVKDDFLELFPDMIVYDPPEDLFEEDED 250
              FRV++ GL    E  L   V+ D  E + + +      +  EEDE+
Sbjct: 661 RASFRVLVLGLESNGEMGLSAIVRQDAHEYYGESL------EFIEEDEE 703

[Close]

BLAST of Tan0019339 vs. TAIR 10
Match: AT3G42570.1 (peroxidase family protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-07
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0


Query: 60 KKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVS 94
          KKE  KEGLI  KELKRLQ+NL+RLDRFI SH S
Sbjct: 4  KKEKSKEGLIAAKELKRLQTNLVRLDRFIDSHPS 37

[Close]

BLAST of Tan0019339 vs. TAIR 10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 28/112 (25.00%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 131 PDMFFYRDMLMMLAKNKRVEETKQVWQDLKREGVLFDQHTFGDIMRAYLDNAMTSEAMDI 190
           PD   Y  +L  ++K  R+ + K++  D+K+ G++ ++ T+ +++  Y       EA  I
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 191 YREMRQSPDRPLSLPFRVILKGLVPYPELRE--QVKDDF--LELFPDMIVYD 239
              M+Q+   P    + +++ GL     +RE  ++ D    L+L PD++ Y+
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349

The following BLAST results are available for this feature:

BLAST of Tan0019339 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PFH7	1.7e-81	76.04	Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX...	[more]
Q9STF9	5.3e-51	42.21	Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9ZVX5	2.2e-04	25.00	Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX...	[more]
Q9FKC3	4.9e-04	22.22	Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop...	[more]
Q9LVW6	6.4e-04	26.47	Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T...	[more]

BLAST of Tan0019339 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966084.1	2.0e-124	92.16	pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima] >XP_022...	[more]
KAG6588226.1	3.5e-124	91.76	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7022139.1	5.9e-124	92.09	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023531705.1	3.8e-123	91.30	pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pep...	[more]
XP_022930047.1	3.3e-122	91.30	pentatricopeptide repeat-containing protein At1g62350 [Cucurbita moschata] >XP_0...	[more]

BLAST of Tan0019339 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQL7	9.9e-125	92.16	pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EQI1	1.6e-122	91.30	pentatricopeptide repeat-containing protein At1g62350 OS=Cucurbita moschata OX=3...	[more]
A0A1S3BQ11	6.6e-121	89.37	pentatricopeptide repeat-containing protein At1g62350 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1DGX4	3.4e-117	86.61	pentatricopeptide repeat-containing protein At1g62350 OS=Momordica charantia OX=...	[more]
A0A2N9FMM7	9.6e-96	71.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16222 PE=4 SV=1	[more]

BLAST of Tan0019339 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62350.1	1.2e-82	76.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G46870.1	3.8e-52	42.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G09320.1	3.0e-17	34.32	Vacuolar sorting protein 9 (VPS9) domain	[more]
AT3G42570.1	3.7e-07	76.47	peroxidase family protein	[more]
AT2G16880.1	1.6e-05	25.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 62..247 e-value: 3.9E-39 score: 135.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 136..164 e-value: 0.25 score: 11.7 coord: 170..196 e-value: 0.086 score: 13.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 167..201 score: 9.481582
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 132..166 score: 8.648523
IPR044795	Pentatricopeptide repeat-containing protein THA8L-like	PANTHER	PTHR46870	PROTEIN THYLAKOID ASSEMBLY 8-LIKE, CHLOROPLASTIC	coord: 35..253
None	No IPR available	PANTHER	PTHR46870:SF1	BNAC09G13590D PROTEIN	coord: 35..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019339.1	Tan0019339.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding